RNA–Protein interactions for RNA: ENST00000373132.3

STK40-204, Transcript of serine/threonine kinase 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene STK40, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK40-204ENST00000373132 NISCHQ9Y2I1 1504 aa31.83■■■□□ 2.69
STK40-204ENST00000373132 SHROOM4Q9ULL8 1493 aa27.76■■■□□ 2.03
STK40-204ENST00000373132 DCAF8L2P0C7V8 631 aa27.74■■■□□ 2.03
STK40-204ENST00000373132 SUPT5HO00267 1087 aaKnown RBP27.03■■□□□ 1.92
STK40-204ENST00000373132 CCDC180Q9P1Z9 1646 aa26.82■■□□□ 1.88
STK40-204ENST00000373132 ZCCHC6Q5VYS8 1495 aaKnown RBP26.73■■□□□ 1.87
STK40-204ENST00000373132 ABCC9O60706 1549 aa26.22■■□□□ 1.79
STK40-204ENST00000373132 SCRIBQ14160 1630 aa25.78■■□□□ 1.72
STK40-204ENST00000373132 DCAF1Q9Y4B6 1507 aa25.67■■□□□ 1.7
STK40-204ENST00000373132 CHIC1Q5VXU3 224 aa25.6■■□□□ 1.69
STK40-204ENST00000373132 EHMT2Q96KQ7 1210 aa25.32■■□□□ 1.64
STK40-204ENST00000373132 MYO15BQ96JP2 1530 aa25.31■■□□□ 1.64
STK40-204ENST00000373132 PABPN1Q86U42 306 aaKnown RBP eCLIP25.29■■□□□ 1.64
STK40-204ENST00000373132 LOC105371045A0A1W2PR82 267 aa25.21■■□□□ 1.63
STK40-204ENST00000373132 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.63
STK40-204ENST00000373132 RSF1Q96T23 1441 aaPredicted RBP25.19■■□□□ 1.62
STK40-204ENST00000373132 FAM9AQ8IZU1 332 aaPredicted RBP25.16■■□□□ 1.62
STK40-204ENST00000373132 NACADO15069 1562 aa25.13■■□□□ 1.61
STK40-204ENST00000373132 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
STK40-204ENST00000373132 TRIM41Q8WV44 630 aa24.93■■□□□ 1.58
STK40-204ENST00000373132 MROH2BQ7Z745 1585 aa24.92■■□□□ 1.58
STK40-204ENST00000373132 WIZO95785 1651 aa24.74■■□□□ 1.55
STK40-204ENST00000373132 PCGF6Q9BYE7 350 aa24.69■■□□□ 1.54
STK40-204ENST00000373132 UNC13AQ9UPW8 1703 aa24.48■■□□□ 1.51
STK40-204ENST00000373132 PPARGC1BQ86YN6 1023 aaKnown RBP24.44■■□□□ 1.5
STK40-204ENST00000373132 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
STK40-204ENST00000373132 BICRAQ9NZM4 1560 aa24.31■■□□□ 1.48
STK40-204ENST00000373132 SMARCA4P51532 1647 aa24.29■■□□□ 1.48
STK40-204ENST00000373132 TTBK1Q5TCY1 1321 aaPredicted RBP24.28■■□□□ 1.48
STK40-204ENST00000373132 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
STK40-204ENST00000373132 ABCC8Q09428 1581 aa24.21■■□□□ 1.47
STK40-204ENST00000373132 RANGAP1P46060 587 aaPredicted RBP24.11■■□□□ 1.45
STK40-204ENST00000373132 TOP2AP11388 1531 aaKnown RBP24.09■■□□□ 1.45
STK40-204ENST00000373132 SMARCA2P51531 1590 aa24.03■■□□□ 1.44
STK40-204ENST00000373132 UBTFP17480 764 aaKnown RBP23.97■■□□□ 1.43
STK40-204ENST00000373132 SOGA1O94964 1423 aa23.95■■□□□ 1.42
STK40-204ENST00000373132 ATAD2BQ9ULI0 1458 aa23.93■■□□□ 1.42
STK40-204ENST00000373132 HRCP23327 699 aa23.92■■□□□ 1.42
STK40-204ENST00000373132 BAZ1BQ9UIG0 1483 aaKnown RBP23.92■■□□□ 1.42
STK40-204ENST00000373132 TRIM26Q12899 539 aaPredicted RBP23.9■■□□□ 1.42
STK40-204ENST00000373132 RUSC2Q8N2Y8 1516 aa23.88■■□□□ 1.41
STK40-204ENST00000373132 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
STK40-204ENST00000373132 EIF4G1Q04637 1599 aaKnown RBP23.75■■□□□ 1.39
STK40-204ENST00000373132 WRNQ14191 1432 aaPredicted RBP eCLIP23.73■■□□□ 1.39
STK40-204ENST00000373132 PEG3Q9GZU2 1588 aa23.54■■□□□ 1.36
STK40-204ENST00000373132 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
STK40-204ENST00000373132 DNAJC5BQ9UF47 199 aa23.51■■□□□ 1.35
STK40-204ENST00000373132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.48■■□□□ 1.35
STK40-204ENST00000373132 CEP162Q5TB80 1403 aa23.48■■□□□ 1.35
STK40-204ENST00000373132 NCAPD3P42695 1498 aa23.4■■□□□ 1.34
STK40-204ENST00000373132 TNIKQ9UKE5 1360 aa23.3■■□□□ 1.32
STK40-204ENST00000373132 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
STK40-204ENST00000373132 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
STK40-204ENST00000373132 GOLGA3Q08378 1498 aa23.26■■□□□ 1.31
STK40-204ENST00000373132 HNRNPUL2Q1KMD3 747 aaKnown RBP23.26■■□□□ 1.31
STK40-204ENST00000373132 CC2D2AQ9P2K1 1620 aa23.24■■□□□ 1.31
STK40-204ENST00000373132 APLP2Q06481 763 aa23.21■■□□□ 1.31
STK40-204ENST00000373132 EEA1Q15075 1411 aa23.21■■□□□ 1.31
STK40-204ENST00000373132 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
STK40-204ENST00000373132 CLIP1P30622 1438 aa23.17■■□□□ 1.3
STK40-204ENST00000373132 NESP48681 1621 aa23.16■■□□□ 1.3
STK40-204ENST00000373132 CUX1P39880 1505 aa23.16■■□□□ 1.3
STK40-204ENST00000373132 P3H3Q8IVL6 736 aa23.15■■□□□ 1.3
STK40-204ENST00000373132 CEP164Q9UPV0 1460 aa23.15■■□□□ 1.3
STK40-204ENST00000373132 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
STK40-204ENST00000373132 CFTRP13569 1480 aa23.14■■□□□ 1.29
STK40-204ENST00000373132 ATP1B4Q9UN42 357 aaPredicted RBP23.14■■□□□ 1.29
STK40-204ENST00000373132 TOP2BQ02880 1626 aa23.07■■□□□ 1.28
STK40-204ENST00000373132 CUX2O14529 1486 aa23.03■■□□□ 1.28
STK40-204ENST00000373132 ITGAEP38570 1179 aa23.01■■□□□ 1.27
STK40-204ENST00000373132 KIF27Q86VH2 1401 aa23■■□□□ 1.27
STK40-204ENST00000373132 KANK4Q5T7N3 995 aaPredicted RBP22.95■■□□□ 1.26
STK40-204ENST00000373132 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
STK40-204ENST00000373132 RAD54L2Q9Y4B4 1467 aa22.94■■□□□ 1.26
STK40-204ENST00000373132 ZEB1P37275 1124 aaPredicted RBP22.93■■□□□ 1.26
STK40-204ENST00000373132 FGD5Q6ZNL6 1462 aa22.91■■□□□ 1.26
STK40-204ENST00000373132 IGF1RP08069 1367 aa22.87■■□□□ 1.25
STK40-204ENST00000373132 KIF21BO75037 1637 aa22.86■■□□□ 1.25
STK40-204ENST00000373132 BIVM-ERCC5R4GMW8 1640 aa22.85■■□□□ 1.25
STK40-204ENST00000373132 VPS8Q8N3P4 1428 aa22.84■■□□□ 1.25
STK40-204ENST00000373132 TDRD9Q8NDG6 1382 aaKnown RBP22.84■■□□□ 1.25
STK40-204ENST00000373132 PRXQ9BXM0 1461 aa22.83■■□□□ 1.25
STK40-204ENST00000373132 CARMIL1Q5VZK9 1371 aa22.82■■□□□ 1.24
STK40-204ENST00000373132 ARAP1Q96P48 1450 aa22.76■■□□□ 1.23
STK40-204ENST00000373132 ARID3CA6NKF2 412 aa22.75■■□□□ 1.23
STK40-204ENST00000373132 POLA1P09884 1462 aaPredicted RBP22.67■■□□□ 1.22
STK40-204ENST00000373132 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
STK40-204ENST00000373132 ARHGAP35Q9NRY4 1499 aa22.62■■□□□ 1.21
STK40-204ENST00000373132 FAM50AQ14320 339 aaKnown RBP22.6■■□□□ 1.21
STK40-204ENST00000373132 URB2Q14146 1524 aaKnown RBP22.59■■□□□ 1.21
STK40-204ENST00000373132 ERICH3Q5RHP9 1530 aa22.58■■□□□ 1.2
STK40-204ENST00000373132 FHOD3Q2V2M9 1422 aa22.55■■□□□ 1.2
STK40-204ENST00000373132 PDS5BQ9NTI5 1447 aa22.53■■□□□ 1.2
STK40-204ENST00000373132 FBLN2P98095 1184 aa22.53■■□□□ 1.2
STK40-204ENST00000373132 DNMBPQ6XZF7 1577 aa22.49■■□□□ 1.19
STK40-204ENST00000373132 AQRO60306 1485 aaKnown RBP eCLIP22.48■■□□□ 1.197e-7■■■■■ 40.5
STK40-204ENST00000373132 PRDM2Q13029 1718 aa22.45■■□□□ 1.19
STK40-204ENST00000373132 DIEXFQ68CQ4 756 aaKnown RBP22.41■■□□□ 1.18
STK40-204ENST00000373132 ABCA10Q8WWZ4 1543 aa22.4■■□□□ 1.18
STK40-204ENST00000373132 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms