RNA–Protein interactions for RNA: ENST00000427533.2

EPB41L1-208, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 3

Gene EPB41L1, Length 460 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-208ENST00000427533 NISCHQ9Y2I1 1504 aa26.87■■□□□ 1.89
EPB41L1-208ENST00000427533 ABCC9O60706 1549 aa24.94■■□□□ 1.58
EPB41L1-208ENST00000427533 CCDC180Q9P1Z9 1646 aa24.39■■□□□ 1.5
EPB41L1-208ENST00000427533 DNAJC5BQ9UF47 199 aa23.83■■□□□ 1.41
EPB41L1-208ENST00000427533 RB1CC1Q8TDY2 1594 aa23.48■■□□□ 1.35
EPB41L1-208ENST00000427533 NACADO15069 1562 aa23.15■■□□□ 1.3
EPB41L1-208ENST00000427533 PABPN1Q86U42 306 aaKnown RBP eCLIP23.11■■□□□ 1.29
EPB41L1-208ENST00000427533 UNC13AQ9UPW8 1703 aa23.05■■□□□ 1.28
EPB41L1-208ENST00000427533 DCAF8L2P0C7V8 631 aa22.97■■□□□ 1.27
EPB41L1-208ENST00000427533 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
EPB41L1-208ENST00000427533 MYO15BQ96JP2 1530 aa22.6■■□□□ 1.21
EPB41L1-208ENST00000427533 CC2D2AQ9P2K1 1620 aa22.5■■□□□ 1.19
EPB41L1-208ENST00000427533 CECR2Q9BXF3 1484 aa22.5■■□□□ 1.19
EPB41L1-208ENST00000427533 SHROOM4Q9ULL8 1493 aa22.39■■□□□ 1.17
EPB41L1-208ENST00000427533 EIF4G1Q04637 1599 aaKnown RBP22.3■■□□□ 1.16
EPB41L1-208ENST00000427533 DNAJC5Q9H3Z4 198 aa22.27■■□□□ 1.16
EPB41L1-208ENST00000427533 SCRIBQ14160 1630 aa22.24■■□□□ 1.15
EPB41L1-208ENST00000427533 ZCCHC6Q5VYS8 1495 aaKnown RBP22.15■■□□□ 1.14
EPB41L1-208ENST00000427533 DCAF1Q9Y4B6 1507 aa22.11■■□□□ 1.13
EPB41L1-208ENST00000427533 CUX2O14529 1486 aa21.68■■□□□ 1.06
EPB41L1-208ENST00000427533 ERCC6Q03468 1493 aa21.58■■□□□ 1.04
EPB41L1-208ENST00000427533 NCAPD3P42695 1498 aa21.34■■□□□ 1.01
EPB41L1-208ENST00000427533 NESP48681 1621 aa21.26■□□□□ 0.99
EPB41L1-208ENST00000427533 ATAD2BQ9ULI0 1458 aa21.23■□□□□ 0.99
EPB41L1-208ENST00000427533 HMGXB3Q12766 1538 aa21.18■□□□□ 0.98
EPB41L1-208ENST00000427533 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
EPB41L1-208ENST00000427533 SMARCA2P51531 1590 aa21.16■□□□□ 0.98
EPB41L1-208ENST00000427533 TRIM41Q8WV44 630 aa21.15■□□□□ 0.98
EPB41L1-208ENST00000427533 SMARCA4P51532 1647 aa21.11■□□□□ 0.97
EPB41L1-208ENST00000427533 KIF21AQ7Z4S6 1674 aa21.04■□□□□ 0.96
EPB41L1-208ENST00000427533 BAZ1BQ9UIG0 1483 aaKnown RBP21.03■□□□□ 0.96
EPB41L1-208ENST00000427533 LAMC3Q9Y6N6 1575 aa21.01■□□□□ 0.95
EPB41L1-208ENST00000427533 BAZ1AQ9NRL2 1556 aaPredicted RBP20.9■□□□□ 0.94
EPB41L1-208ENST00000427533 PDS5BQ9NTI5 1447 aa20.87■□□□□ 0.93
EPB41L1-208ENST00000427533 PEG3Q9GZU2 1588 aa20.86■□□□□ 0.93
EPB41L1-208ENST00000427533 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
EPB41L1-208ENST00000427533 WDR62O43379 1518 aa20.72■□□□□ 0.91
EPB41L1-208ENST00000427533 MROH2BQ7Z745 1585 aa20.72■□□□□ 0.91
EPB41L1-208ENST00000427533 CADPSQ9ULU8 1353 aa20.69■□□□□ 0.9
EPB41L1-208ENST00000427533 OSCARQ8IYS5 282 aa20.59■□□□□ 0.89
EPB41L1-208ENST00000427533 CEP164Q9UPV0 1460 aa20.56■□□□□ 0.88
EPB41L1-208ENST00000427533 WIZO95785 1651 aa20.49■□□□□ 0.87
EPB41L1-208ENST00000427533 FANCD2Q9BXW9 1451 aa20.49■□□□□ 0.87
EPB41L1-208ENST00000427533 RIMBP3CA6NJZ7 1639 aa20.45■□□□□ 0.87
EPB41L1-208ENST00000427533 RIMBP3BA6NNM3 1639 aa20.45■□□□□ 0.87
EPB41L1-208ENST00000427533 RIMBP3Q9UFD9 1639 aa20.45■□□□□ 0.87
EPB41L1-208ENST00000427533 URB2Q14146 1524 aaKnown RBP20.36■□□□□ 0.85
EPB41L1-208ENST00000427533 CFTRP13569 1480 aa20.33■□□□□ 0.85
EPB41L1-208ENST00000427533 ARHGEF11O15085 1522 aa20.29■□□□□ 0.84
EPB41L1-208ENST00000427533 PRDM2Q13029 1718 aa20.22■□□□□ 0.83
EPB41L1-208ENST00000427533 ZNF608Q9ULD9 1512 aaPredicted RBP20.21■□□□□ 0.83
EPB41L1-208ENST00000427533 CYB5RLQ6IPT4 315 aa20.17■□□□□ 0.82
EPB41L1-208ENST00000427533 TRHP20396 242 aaPredicted RBP20.16■□□□□ 0.82
EPB41L1-208ENST00000427533 IFT140Q96RY7 1462 aa20.16■□□□□ 0.82
EPB41L1-208ENST00000427533 TOP2AP11388 1531 aaKnown RBP20.15■□□□□ 0.82
EPB41L1-208ENST00000427533 CHD1O14646 1710 aa20.11■□□□□ 0.81
EPB41L1-208ENST00000427533 EIF4G3O43432 1585 aaKnown RBP20.1■□□□□ 0.81
EPB41L1-208ENST00000427533 ARAP1Q96P48 1450 aa20.05■□□□□ 0.8
EPB41L1-208ENST00000427533 RSF1Q96T23 1441 aaPredicted RBP20.05■□□□□ 0.8
EPB41L1-208ENST00000427533 TOPBP1Q92547 1522 aa20.04■□□□□ 0.8
EPB41L1-208ENST00000427533 AEBP2Q6ZN18 517 aaPredicted RBP19.98■□□□□ 0.79
EPB41L1-208ENST00000427533 FBLN2P98095 1184 aa19.96■□□□□ 0.79
EPB41L1-208ENST00000427533 AQRO60306 1485 aaKnown RBP eCLIP19.94■□□□□ 0.78
EPB41L1-208ENST00000427533 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
EPB41L1-208ENST00000427533 DNMBPQ6XZF7 1577 aa19.93■□□□□ 0.78
EPB41L1-208ENST00000427533 TARBP1Q13395 1621 aaKnown RBP19.91■□□□□ 0.78
EPB41L1-208ENST00000427533 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
EPB41L1-208ENST00000427533 POLA1P09884 1462 aaPredicted RBP19.79■□□□□ 0.76
EPB41L1-208ENST00000427533 CLASP1Q7Z460 1538 aa19.77■□□□□ 0.76
EPB41L1-208ENST00000427533 RAD54L2Q9Y4B4 1467 aa19.75■□□□□ 0.75
EPB41L1-208ENST00000427533 SNAPC4Q5SXM2 1469 aa19.74■□□□□ 0.75
EPB41L1-208ENST00000427533 SYNJ1O43426 1573 aa19.74■□□□□ 0.75
EPB41L1-208ENST00000427533 TDRD9Q8NDG6 1382 aaKnown RBP19.73■□□□□ 0.75
EPB41L1-208ENST00000427533 SOGA1O94964 1423 aa19.68■□□□□ 0.74
EPB41L1-208ENST00000427533 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
EPB41L1-208ENST00000427533 WDR97A6NE52 1622 aa19.65■□□□□ 0.74
EPB41L1-208ENST00000427533 MAGI1Q96QZ7 1491 aaPredicted RBP19.63■□□□□ 0.73
EPB41L1-208ENST00000427533 GAPVD1Q14C86 1478 aa19.6■□□□□ 0.73
EPB41L1-208ENST00000427533 FGD5Q6ZNL6 1462 aa19.6■□□□□ 0.73
EPB41L1-208ENST00000427533 SYNJ2O15056 1496 aa19.59■□□□□ 0.73
EPB41L1-208ENST00000427533 GRIN2BQ13224 1484 aa19.58■□□□□ 0.72
EPB41L1-208ENST00000427533 PBRM1Q86U86 1689 aa19.56■□□□□ 0.72
EPB41L1-208ENST00000427533 CUX1P39880 1505 aa19.5■□□□□ 0.71
EPB41L1-208ENST00000427533 ERCC6L2Q5T890 1561 aa19.46■□□□□ 0.71
EPB41L1-208ENST00000427533 KIF13AQ9H1H9 1805 aa19.41■□□□□ 0.7
EPB41L1-208ENST00000427533 ABCA5Q8WWZ7 1642 aa19.38■□□□□ 0.69
EPB41L1-208ENST00000427533 CEP170Q5SW79 1584 aa19.36■□□□□ 0.69
EPB41L1-208ENST00000427533 GRIN2AQ12879 1464 aa19.34■□□□□ 0.69
EPB41L1-208ENST00000427533 ABCA10Q8WWZ4 1543 aa19.32■□□□□ 0.68
EPB41L1-208ENST00000427533 SHROOM2Q13796 1616 aa19.29■□□□□ 0.68
EPB41L1-208ENST00000427533 ADAMTS12P58397 1594 aa19.28■□□□□ 0.68
EPB41L1-208ENST00000427533 NUP160Q12769 1436 aa19.26■□□□□ 0.67
EPB41L1-208ENST00000427533 FAM69CQ0P6D2 419 aa19.17■□□□□ 0.66
EPB41L1-208ENST00000427533 FHAD1B1AJZ9 1412 aa19.17■□□□□ 0.66
EPB41L1-208ENST00000427533 PRG4Q92954 1404 aaPredicted RBP19.16■□□□□ 0.66
EPB41L1-208ENST00000427533 ILDR1Q86SU0 546 aaPredicted RBP19.14■□□□□ 0.65
EPB41L1-208ENST00000427533 ABCC10Q5T3U5 1492 aa19.14■□□□□ 0.65
EPB41L1-208ENST00000427533 WRNQ14191 1432 aaPredicted RBP eCLIP19.13■□□□□ 0.65
EPB41L1-208ENST00000427533 TSPOAP1O95153 1857 aa19.13■□□□□ 0.65
EPB41L1-208ENST00000427533 KDM6BO15054 1643 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms