RNA–Protein interactions for RNA: ENST00000380875.7

FREM1-201, Transcript of FRAS1 related extracellular matrix 1, humanhuman

TSL 1 (best)

Gene FREM1, Length 6,126 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-201ENST00000380875 DCAF8L2P0C7V8 631 aa16.55■□□□□ 0.24
FREM1-201ENST00000380875 SUPT5HO00267 1087 aaKnown RBP15.1■□□□□ 0.01
FREM1-201ENST00000380875 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
FREM1-201ENST00000380875 FAM9AQ8IZU1 332 aaPredicted RBP14.91□□□□□ -0.02
FREM1-201ENST00000380875 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
FREM1-201ENST00000380875 APLP2Q06481 763 aa14.73□□□□□ -0.05
FREM1-201ENST00000380875 NISCHQ9Y2I1 1504 aa14.53□□□□□ -0.08
FREM1-201ENST00000380875 RANGAP1P46060 587 aaPredicted RBP14.51□□□□□ -0.09
FREM1-201ENST00000380875 ATP1B4Q9UN42 357 aaPredicted RBP14.49□□□□□ -0.09
FREM1-201ENST00000380875 TTBK1Q5TCY1 1321 aaPredicted RBP14.49□□□□□ -0.09
FREM1-201ENST00000380875 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
FREM1-201ENST00000380875 MYT1LQ9UL68 1186 aa14.25□□□□□ -0.13
FREM1-201ENST00000380875 CHIC1Q5VXU3 224 aa14.04□□□□□ -0.16
FREM1-201ENST00000380875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
FREM1-201ENST00000380875 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
FREM1-201ENST00000380875 UBTFP17480 764 aaKnown RBP14.01□□□□□ -0.17
FREM1-201ENST00000380875 PCGF6Q9BYE7 350 aa13.97□□□□□ -0.17
FREM1-201ENST00000380875 TRIM41Q8WV44 630 aa13.94□□□□□ -0.18
FREM1-201ENST00000380875 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
FREM1-201ENST00000380875 CCER1Q8TC90 406 aaPredicted RBP13.8□□□□□ -0.2
FREM1-201ENST00000380875 POLR3GLQ9BT43 218 aa13.79□□□□□ -0.2
FREM1-201ENST00000380875 SLC4A1APQ9BWU0 796 aaKnown RBP13.77□□□□□ -0.2
FREM1-201ENST00000380875 ITGAEP38570 1179 aa13.68□□□□□ -0.22
FREM1-201ENST00000380875 NEFLP07196 543 aa13.63□□□□□ -0.23
FREM1-201ENST00000380875 CNGB1Q14028 1251 aaPredicted RBP13.62□□□□□ -0.23
FREM1-201ENST00000380875 PPARGC1BQ86YN6 1023 aaKnown RBP13.62□□□□□ -0.23
FREM1-201ENST00000380875 CENPBP07199 599 aaPredicted RBP13.57□□□□□ -0.24
FREM1-201ENST00000380875 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
FREM1-201ENST00000380875 FBLN2P98095 1184 aa13.5□□□□□ -0.25
FREM1-201ENST00000380875 BCANQ96GW7 911 aa13.47□□□□□ -0.25
FREM1-201ENST00000380875 ZEB1P37275 1124 aaPredicted RBP13.47□□□□□ -0.25
FREM1-201ENST00000380875 DAXXQ9UER7 740 aaPredicted RBP13.46□□□□□ -0.26
FREM1-201ENST00000380875 PABPN1Q86U42 306 aaKnown RBP eCLIP13.43□□□□□ -0.267e-8■□□□□ 11.1
FREM1-201ENST00000380875 SLC24A1O60721 1099 aa13.4□□□□□ -0.26
FREM1-201ENST00000380875 PLPPR3Q6T4P5 718 aa13.39□□□□□ -0.27
FREM1-201ENST00000380875 ABCC9O60706 1549 aa13.34□□□□□ -0.27
FREM1-201ENST00000380875 TRIM52Q96A61 297 aa13.31□□□□□ -0.28
FREM1-201ENST00000380875 FAM50AQ14320 339 aaKnown RBP13.29□□□□□ -0.28
FREM1-201ENST00000380875 ESF1Q9H501 851 aaKnown RBP13.26□□□□□ -0.29
FREM1-201ENST00000380875 CLSPNQ9HAW4 1339 aa13.24□□□□□ -0.29
FREM1-201ENST00000380875 ZNF326Q5BKZ1 582 aaKnown RBP13.2□□□□□ -0.3
FREM1-201ENST00000380875 MYT1Q01538 1121 aa13.19□□□□□ -0.3
FREM1-201ENST00000380875 ARID3CA6NKF2 412 aa13.18□□□□□ -0.3
FREM1-201ENST00000380875 BCL11AQ9H165 835 aa13.17□□□□□ -0.3
FREM1-201ENST00000380875 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
FREM1-201ENST00000380875 ZNF316A6NFI3 1004 aaPredicted RBP13.12□□□□□ -0.31
FREM1-201ENST00000380875 STAG3Q9UJ98 1225 aa13.1□□□□□ -0.31
FREM1-201ENST00000380875 NEUROD1Q13562 356 aa13.07□□□□□ -0.32
FREM1-201ENST00000380875 NPM1P06748 294 aaKnown RBP eCLIP13.07□□□□□ -0.32
FREM1-201ENST00000380875 NEFMP07197 916 aa13.07□□□□□ -0.32
FREM1-201ENST00000380875 ZNF777Q9ULD5 760 aaPredicted RBP13.05□□□□□ -0.32
FREM1-201ENST00000380875 SCAF1Q9H7N4 1312 aaKnown RBP13.04□□□□□ -0.32
FREM1-201ENST00000380875 TRIM26Q12899 539 aaPredicted RBP13.02□□□□□ -0.32
FREM1-201ENST00000380875 CHGAP10645 457 aaKnown RBP13.01□□□□□ -0.33
FREM1-201ENST00000380875 A0A0G2JS52 829 aa13□□□□□ -0.33
FREM1-201ENST00000380875 P3H3Q8IVL6 736 aa13□□□□□ -0.33
FREM1-201ENST00000380875 CANXP27824 592 aaKnown RBP12.99□□□□□ -0.33
FREM1-201ENST00000380875 LOC105371045A0A1W2PR82 267 aa12.98□□□□□ -0.33
FREM1-201ENST00000380875 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
FREM1-201ENST00000380875 ZBTB7CA1YPR0 619 aa12.85□□□□□ -0.35
FREM1-201ENST00000380875 CDK11AQ9UQ88 783 aaPredicted RBP12.83□□□□□ -0.36
FREM1-201ENST00000380875 RTL5Q5HYW3 569 aaPredicted RBP12.82□□□□□ -0.36
FREM1-201ENST00000380875 C14orf37Q86TY3 774 aa12.79□□□□□ -0.36
FREM1-201ENST00000380875 SENP3Q9H4L4 574 aaPredicted RBP12.78□□□□□ -0.36
FREM1-201ENST00000380875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.76□□□□□ -0.378e-9■■□□□ 12.1
FREM1-201ENST00000380875 HAP1P54257 671 aaPredicted RBP12.76□□□□□ -0.37
FREM1-201ENST00000380875 ANP32CO43423 234 aa12.76□□□□□ -0.37
FREM1-201ENST00000380875 ARID4BQ4LE39 1312 aaPredicted RBP12.76□□□□□ -0.37
FREM1-201ENST00000380875 HRCP23327 699 aa12.75□□□□□ -0.37
FREM1-201ENST00000380875 NPM2Q86SE8 214 aaKnown RBP12.71□□□□□ -0.37
FREM1-201ENST00000380875 PPP1R15AO75807 674 aaPredicted RBP12.68□□□□□ -0.38
FREM1-201ENST00000380875 CHMP7Q8WUX9 453 aaPredicted RBP12.68□□□□□ -0.38
FREM1-201ENST00000380875 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
FREM1-201ENST00000380875 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
FREM1-201ENST00000380875 KCNH8Q96L42 1107 aa12.61□□□□□ -0.39
FREM1-201ENST00000380875 ARXQ96QS3 562 aa12.6□□□□□ -0.39
FREM1-201ENST00000380875 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
FREM1-201ENST00000380875 CHIC2Q9UKJ5 165 aa12.56□□□□□ -0.4
FREM1-201ENST00000380875 NPHP1O15259 732 aa12.54□□□□□ -0.4
FREM1-201ENST00000380875 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
FREM1-201ENST00000380875 LMOD2Q6P5Q4 547 aa12.52□□□□□ -0.41
FREM1-201ENST00000380875 KDM2AQ9Y2K7 1162 aa12.52□□□□□ -0.41
FREM1-201ENST00000380875 TSPY4P0CV99 314 aa12.51□□□□□ -0.41
FREM1-201ENST00000380875 TSPY10P0CW01 314 aa12.51□□□□□ -0.41
FREM1-201ENST00000380875 CDK11BP21127 795 aaKnown RBP12.5□□□□□ -0.41
FREM1-201ENST00000380875 SALL2Q9Y467 1007 aaPredicted RBP12.49□□□□□ -0.41
FREM1-201ENST00000380875 ERCC6Q03468 1493 aa12.48□□□□□ -0.41
FREM1-201ENST00000380875 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
FREM1-201ENST00000380875 TULP1O00294 542 aaPredicted RBP12.47□□□□□ -0.41
FREM1-201ENST00000380875 TONSLQ96HA7 1378 aa12.46□□□□□ -0.41
FREM1-201ENST00000380875 WDR43Q15061 677 aaKnown RBP eCLIP12.44□□□□□ -0.42
FREM1-201ENST00000380875 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
FREM1-201ENST00000380875 MYH16Q9H6N6 1097 aa12.39□□□□□ -0.43
FREM1-201ENST00000380875 UPF2Q9HAU5 1272 aaKnown RBP12.39□□□□□ -0.43
FREM1-201ENST00000380875 ANP32BQ92688 251 aaKnown RBP12.39□□□□□ -0.43
FREM1-201ENST00000380875 FAM9BQ8IZU0 186 aa12.38□□□□□ -0.43
FREM1-201ENST00000380875 MLECQ14165 292 aa12.37□□□□□ -0.43
FREM1-201ENST00000380875 PPM1GO15355 546 aaPredicted RBP12.36□□□□□ -0.43
FREM1-201ENST00000380875 ANP32AP39687 249 aaKnown RBP12.36□□□□□ -0.43
FREM1-201ENST00000380875 MTUS2Q5JR59 1369 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms