RNA–Protein interactions for RNA: ENST00000373945.5

EPB41L1-204, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 2

Gene EPB41L1, Length 763 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-204ENST00000373945 NISCHQ9Y2I1 1504 aa43.71■■■■■ 4.59
EPB41L1-204ENST00000373945 CCDC180Q9P1Z9 1646 aa38.64■■■■□ 3.78
EPB41L1-204ENST00000373945 ABCC9O60706 1549 aa37.48■■■■□ 3.59
EPB41L1-204ENST00000373945 ZCCHC6Q5VYS8 1495 aaKnown RBP36.47■■■■□ 3.43
EPB41L1-204ENST00000373945 DCAF8L2P0C7V8 631 aa36.41■■■■□ 3.42
EPB41L1-204ENST00000373945 NACADO15069 1562 aa36.32■■■■□ 3.41
EPB41L1-204ENST00000373945 MYO15BQ96JP2 1530 aa36.28■■■■□ 3.4
EPB41L1-204ENST00000373945 RB1CC1Q8TDY2 1594 aa36.25■■■■□ 3.39
EPB41L1-204ENST00000373945 DCAF1Q9Y4B6 1507 aa36.23■■■■□ 3.39
EPB41L1-204ENST00000373945 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
EPB41L1-204ENST00000373945 UNC13AQ9UPW8 1703 aa35.24■■■■□ 3.23
EPB41L1-204ENST00000373945 PABPN1Q86U42 306 aaKnown RBP eCLIP35.12■■■■□ 3.21
EPB41L1-204ENST00000373945 BICRAQ9NZM4 1560 aa35.08■■■■□ 3.21
EPB41L1-204ENST00000373945 SHROOM4Q9ULL8 1493 aa34.88■■■■□ 3.17
EPB41L1-204ENST00000373945 EIF4G1Q04637 1599 aaKnown RBP34.15■■■■□ 3.06
EPB41L1-204ENST00000373945 DNAJC5BQ9UF47 199 aa34.1■■■■□ 3.05
EPB41L1-204ENST00000373945 CECR2Q9BXF3 1484 aa33.97■■■■□ 3.03
EPB41L1-204ENST00000373945 CC2D2AQ9P2K1 1620 aa33.9■■■■□ 3.02
EPB41L1-204ENST00000373945 BAZ1AQ9NRL2 1556 aaPredicted RBP33.86■■■■□ 3.01
EPB41L1-204ENST00000373945 SMARCA4P51532 1647 aa33.78■■■■□ 3
EPB41L1-204ENST00000373945 MROH2BQ7Z745 1585 aa33.65■■■□□ 2.98
EPB41L1-204ENST00000373945 ATAD2BQ9ULI0 1458 aa33.57■■■□□ 2.97
EPB41L1-204ENST00000373945 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
EPB41L1-204ENST00000373945 NCAPD3P42695 1498 aa33.55■■■□□ 2.96
EPB41L1-204ENST00000373945 PEG3Q9GZU2 1588 aa33.5■■■□□ 2.95
EPB41L1-204ENST00000373945 RSF1Q96T23 1441 aaPredicted RBP33.45■■■□□ 2.95
EPB41L1-204ENST00000373945 HMGXB3Q12766 1538 aa33.36■■■□□ 2.93
EPB41L1-204ENST00000373945 BAZ1BQ9UIG0 1483 aaKnown RBP33.31■■■□□ 2.92
EPB41L1-204ENST00000373945 WIZO95785 1651 aa33.25■■■□□ 2.91
EPB41L1-204ENST00000373945 TOP2AP11388 1531 aaKnown RBP32.99■■■□□ 2.87
EPB41L1-204ENST00000373945 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
EPB41L1-204ENST00000373945 CCDC88BA6NC98 1476 aa32.62■■■□□ 2.81
EPB41L1-204ENST00000373945 CADPSQ9ULU8 1353 aa32.59■■■□□ 2.81
EPB41L1-204ENST00000373945 LAMC3Q9Y6N6 1575 aa32.55■■■□□ 2.8
EPB41L1-204ENST00000373945 NESP48681 1621 aa32.51■■■□□ 2.8
EPB41L1-204ENST00000373945 CFTRP13569 1480 aa32.45■■■□□ 2.79
EPB41L1-204ENST00000373945 PDS5BQ9NTI5 1447 aa32.39■■■□□ 2.78
EPB41L1-204ENST00000373945 ERCC6Q03468 1493 aa32.32■■■□□ 2.76
EPB41L1-204ENST00000373945 FANCD2Q9BXW9 1451 aa32.16■■■□□ 2.74
EPB41L1-204ENST00000373945 CEP164Q9UPV0 1460 aa32.1■■■□□ 2.73
EPB41L1-204ENST00000373945 KIF21AQ7Z4S6 1674 aa32.06■■■□□ 2.72
EPB41L1-204ENST00000373945 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
EPB41L1-204ENST00000373945 MRC2Q9UBG0 1479 aa31.97■■■□□ 2.71
EPB41L1-204ENST00000373945 THOC2Q8NI27 1593 aaKnown RBP31.93■■■□□ 2.7
EPB41L1-204ENST00000373945 CUX2O14529 1486 aa31.88■■■□□ 2.69
EPB41L1-204ENST00000373945 WDR62O43379 1518 aa31.84■■■□□ 2.69
EPB41L1-204ENST00000373945 ABCC8Q09428 1581 aa31.79■■■□□ 2.68
EPB41L1-204ENST00000373945 URB2Q14146 1524 aaKnown RBP31.79■■■□□ 2.68
EPB41L1-204ENST00000373945 TOPBP1Q92547 1522 aa31.68■■■□□ 2.66
EPB41L1-204ENST00000373945 DNMBPQ6XZF7 1577 aa31.66■■■□□ 2.66
EPB41L1-204ENST00000373945 CUX1P39880 1505 aa31.54■■■□□ 2.64
EPB41L1-204ENST00000373945 WRNQ14191 1432 aaPredicted RBP eCLIP31.54■■■□□ 2.64
EPB41L1-204ENST00000373945 IFT140Q96RY7 1462 aa31.44■■■□□ 2.62
EPB41L1-204ENST00000373945 POLA1P09884 1462 aaPredicted RBP31.43■■■□□ 2.62
EPB41L1-204ENST00000373945 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
EPB41L1-204ENST00000373945 TOP2BQ02880 1626 aa31.38■■■□□ 2.61
EPB41L1-204ENST00000373945 SOGA1O94964 1423 aa31.36■■■□□ 2.61
EPB41L1-204ENST00000373945 SYNJ1O43426 1573 aa31.34■■■□□ 2.61
EPB41L1-204ENST00000373945 BIVM-ERCC5R4GMW8 1640 aa31.34■■■□□ 2.61
EPB41L1-204ENST00000373945 RAD54L2Q9Y4B4 1467 aa31.27■■■□□ 2.6
EPB41L1-204ENST00000373945 TARBP1Q13395 1621 aaKnown RBP31.26■■■□□ 2.59
EPB41L1-204ENST00000373945 ZNF608Q9ULD9 1512 aaPredicted RBP31.19■■■□□ 2.58
EPB41L1-204ENST00000373945 ABCA10Q8WWZ4 1543 aa31.15■■■□□ 2.58
EPB41L1-204ENST00000373945 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
EPB41L1-204ENST00000373945 TDRD9Q8NDG6 1382 aaKnown RBP31.11■■■□□ 2.57
EPB41L1-204ENST00000373945 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.571e-8■■□□□ 13.5
EPB41L1-204ENST00000373945 TRIM41Q8WV44 630 aa31.09■■■□□ 2.57
EPB41L1-204ENST00000373945 EIF4G3O43432 1585 aaKnown RBP31.05■■■□□ 2.56
EPB41L1-204ENST00000373945 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
EPB41L1-204ENST00000373945 GRIN2BQ13224 1484 aa30.95■■■□□ 2.54
EPB41L1-204ENST00000373945 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
EPB41L1-204ENST00000373945 ABCA5Q8WWZ7 1642 aa30.92■■■□□ 2.54
EPB41L1-204ENST00000373945 CHIC1Q5VXU3 224 aa30.91■■■□□ 2.54
EPB41L1-204ENST00000373945 KIF27Q86VH2 1401 aa30.89■■■□□ 2.53
EPB41L1-204ENST00000373945 MAGI1Q96QZ7 1491 aaPredicted RBP30.82■■■□□ 2.53
EPB41L1-204ENST00000373945 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
EPB41L1-204ENST00000373945 ERICH3Q5RHP9 1530 aa30.78■■■□□ 2.52
EPB41L1-204ENST00000373945 PBRM1Q86U86 1689 aa30.75■■■□□ 2.51
EPB41L1-204ENST00000373945 IGF1RP08069 1367 aa30.71■■■□□ 2.51
EPB41L1-204ENST00000373945 CHMP7Q8WUX9 453 aaPredicted RBP30.7■■■□□ 2.51
EPB41L1-204ENST00000373945 SYNJ2O15056 1496 aa30.7■■■□□ 2.5
EPB41L1-204ENST00000373945 FBLN2P98095 1184 aa30.69■■■□□ 2.5
EPB41L1-204ENST00000373945 OSCARQ8IYS5 282 aa30.68■■■□□ 2.5
EPB41L1-204ENST00000373945 FHAD1B1AJZ9 1412 aa30.66■■■□□ 2.5
EPB41L1-204ENST00000373945 ADAMTS12P58397 1594 aa30.61■■■□□ 2.49
EPB41L1-204ENST00000373945 RUSC2Q8N2Y8 1516 aa30.6■■■□□ 2.49
EPB41L1-204ENST00000373945 EEA1Q15075 1411 aa30.56■■■□□ 2.48
EPB41L1-204ENST00000373945 CARMIL1Q5VZK9 1371 aa30.54■■■□□ 2.48
EPB41L1-204ENST00000373945 CHD1O14646 1710 aa30.53■■■□□ 2.48
EPB41L1-204ENST00000373945 CUL7Q14999 1698 aa30.52■■■□□ 2.48
EPB41L1-204ENST00000373945 GRIN2AQ12879 1464 aa30.51■■■□□ 2.48
EPB41L1-204ENST00000373945 CSRNP3Q8WYN3 585 aa30.47■■■□□ 2.47
EPB41L1-204ENST00000373945 NUP160Q12769 1436 aa30.39■■■□□ 2.45
EPB41L1-204ENST00000373945 RAPGEF2Q9Y4G8 1499 aa30.38■■■□□ 2.45
EPB41L1-204ENST00000373945 PRXQ9BXM0 1461 aa30.36■■■□□ 2.45
EPB41L1-204ENST00000373945 FAM9AQ8IZU1 332 aaPredicted RBP30.35■■■□□ 2.45
EPB41L1-204ENST00000373945 CLASP1Q7Z460 1538 aa30.3■■■□□ 2.44
EPB41L1-204ENST00000373945 CEP170Q5SW79 1584 aa30.29■■■□□ 2.44
EPB41L1-204ENST00000373945 KIAA0586Q9BVV6 1533 aa30.21■■■□□ 2.43
EPB41L1-204ENST00000373945 JPH4Q96JJ6 628 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms