RNA–Protein interactions for RNA: ENST00000373129.7

STK40-202, Transcript of serine/threonine kinase 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene STK40, Length 3,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK40-202ENST00000373129 NISCHQ9Y2I1 1504 aa33.08■■■□□ 2.89
STK40-202ENST00000373129 DCAF8L2P0C7V8 631 aa29.49■■■□□ 2.31
STK40-202ENST00000373129 SHROOM4Q9ULL8 1493 aa29.22■■■□□ 2.27
STK40-202ENST00000373129 SUPT5HO00267 1087 aaKnown RBP28.46■■■□□ 2.15
STK40-202ENST00000373129 CCDC180Q9P1Z9 1646 aa27.75■■■□□ 2.03
STK40-202ENST00000373129 ZCCHC6Q5VYS8 1495 aaKnown RBP27.7■■■□□ 2.03
STK40-202ENST00000373129 ABCC9O60706 1549 aa27.64■■■□□ 2.01
STK40-202ENST00000373129 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
STK40-202ENST00000373129 EHMT2Q96KQ7 1210 aa26.88■■□□□ 1.89
STK40-202ENST00000373129 PABPN1Q86U42 306 aaKnown RBP eCLIP26.77■■□□□ 1.88
STK40-202ENST00000373129 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
STK40-202ENST00000373129 FAM9AQ8IZU1 332 aaPredicted RBP26.57■■□□□ 1.84
STK40-202ENST00000373129 DCAF1Q9Y4B6 1507 aa26.5■■□□□ 1.83
STK40-202ENST00000373129 LOC105371045A0A1W2PR82 267 aa26.42■■□□□ 1.82
STK40-202ENST00000373129 CECR2Q9BXF3 1484 aa26.31■■□□□ 1.8
STK40-202ENST00000373129 MYO15BQ96JP2 1530 aa26.24■■□□□ 1.79
STK40-202ENST00000373129 RSF1Q96T23 1441 aaPredicted RBP26.21■■□□□ 1.79
STK40-202ENST00000373129 TRIM41Q8WV44 630 aa26.18■■□□□ 1.78
STK40-202ENST00000373129 NACADO15069 1562 aa26.14■■□□□ 1.78
STK40-202ENST00000373129 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
STK40-202ENST00000373129 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.74
STK40-202ENST00000373129 PCGF6Q9BYE7 350 aa25.83■■□□□ 1.73
STK40-202ENST00000373129 PPARGC1BQ86YN6 1023 aaKnown RBP25.78■■□□□ 1.72
STK40-202ENST00000373129 WIZO95785 1651 aa25.74■■□□□ 1.71
STK40-202ENST00000373129 TTBK1Q5TCY1 1321 aaPredicted RBP25.72■■□□□ 1.71
STK40-202ENST00000373129 RANGAP1P46060 587 aaPredicted RBP25.6■■□□□ 1.69
STK40-202ENST00000373129 BAZ1AQ9NRL2 1556 aaPredicted RBP25.4■■□□□ 1.66
STK40-202ENST00000373129 UNC13AQ9UPW8 1703 aa25.38■■□□□ 1.65
STK40-202ENST00000373129 CCDC88BA6NC98 1476 aa25.28■■□□□ 1.64
STK40-202ENST00000373129 BICRAQ9NZM4 1560 aa25.27■■□□□ 1.64
STK40-202ENST00000373129 UBTFP17480 764 aaKnown RBP25.26■■□□□ 1.63
STK40-202ENST00000373129 ABCC8Q09428 1581 aa25.25■■□□□ 1.63
STK40-202ENST00000373129 SMARCA4P51532 1647 aa25.24■■□□□ 1.63
STK40-202ENST00000373129 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
STK40-202ENST00000373129 TOP2AP11388 1531 aaKnown RBP25.01■■□□□ 1.59
STK40-202ENST00000373129 SOGA1O94964 1423 aa24.99■■□□□ 1.59
STK40-202ENST00000373129 ATAD2BQ9ULI0 1458 aa24.96■■□□□ 1.59
STK40-202ENST00000373129 SMARCA2P51531 1590 aa24.94■■□□□ 1.58
STK40-202ENST00000373129 RUSC2Q8N2Y8 1516 aa24.9■■□□□ 1.58
STK40-202ENST00000373129 TRIM26Q12899 539 aaPredicted RBP24.88■■□□□ 1.57
STK40-202ENST00000373129 CSRNP3Q8WYN3 585 aa24.87■■□□□ 1.57
STK40-202ENST00000373129 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
STK40-202ENST00000373129 HRCP23327 699 aa24.79■■□□□ 1.56
STK40-202ENST00000373129 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.56
STK40-202ENST00000373129 EIF4G1Q04637 1599 aaKnown RBP24.67■■□□□ 1.54
STK40-202ENST00000373129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.6■■□□□ 1.53
STK40-202ENST00000373129 ATP1B4Q9UN42 357 aaPredicted RBP24.57■■□□□ 1.52
STK40-202ENST00000373129 APLP2Q06481 763 aa24.48■■□□□ 1.51
STK40-202ENST00000373129 P3H3Q8IVL6 736 aa24.48■■□□□ 1.51
STK40-202ENST00000373129 HNRNPUL2Q1KMD3 747 aaKnown RBP24.47■■□□□ 1.51
STK40-202ENST00000373129 CEP162Q5TB80 1403 aa24.45■■□□□ 1.5
STK40-202ENST00000373129 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
STK40-202ENST00000373129 CCER1Q8TC90 406 aaPredicted RBP24.42■■□□□ 1.5
STK40-202ENST00000373129 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
STK40-202ENST00000373129 ITGAEP38570 1179 aa24.33■■□□□ 1.49
STK40-202ENST00000373129 PEG3Q9GZU2 1588 aa24.32■■□□□ 1.48
STK40-202ENST00000373129 NESP48681 1621 aa24.31■■□□□ 1.48
STK40-202ENST00000373129 CC2D2AQ9P2K1 1620 aa24.31■■□□□ 1.48
STK40-202ENST00000373129 RAPGEF2Q9Y4G8 1499 aa24.27■■□□□ 1.48
STK40-202ENST00000373129 TNIKQ9UKE5 1360 aa24.22■■□□□ 1.47
STK40-202ENST00000373129 CADPSQ9ULU8 1353 aa24.22■■□□□ 1.47
STK40-202ENST00000373129 GOLGA3Q08378 1498 aa24.21■■□□□ 1.47
STK40-202ENST00000373129 CLIP1P30622 1438 aa24.19■■□□□ 1.46
STK40-202ENST00000373129 ARID3CA6NKF2 412 aa24.16■■□□□ 1.46
STK40-202ENST00000373129 CUX2O14529 1486 aa24.12■■□□□ 1.45
STK40-202ENST00000373129 CUX1P39880 1505 aa24.1■■□□□ 1.45
STK40-202ENST00000373129 CFTRP13569 1480 aa24.09■■□□□ 1.45
STK40-202ENST00000373129 EEA1Q15075 1411 aa24.08■■□□□ 1.45
STK40-202ENST00000373129 CEP164Q9UPV0 1460 aa24.08■■□□□ 1.45
STK40-202ENST00000373129 HMGXB3Q12766 1538 aa24.06■■□□□ 1.44
STK40-202ENST00000373129 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
STK40-202ENST00000373129 KIF27Q86VH2 1401 aa24.03■■□□□ 1.44
STK40-202ENST00000373129 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
STK40-202ENST00000373129 FANCD2Q9BXW9 1451 aa24■■□□□ 1.43
STK40-202ENST00000373129 KANK4Q5T7N3 995 aaPredicted RBP24■■□□□ 1.43
STK40-202ENST00000373129 FBLN2P98095 1184 aa23.97■■□□□ 1.43
STK40-202ENST00000373129 FGD5Q6ZNL6 1462 aa23.93■■□□□ 1.42
STK40-202ENST00000373129 TOP2BQ02880 1626 aa23.92■■□□□ 1.42
STK40-202ENST00000373129 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.41
STK40-202ENST00000373129 IGF1RP08069 1367 aa23.87■■□□□ 1.41
STK40-202ENST00000373129 ZEB1P37275 1124 aaPredicted RBP23.83■■□□□ 1.4
STK40-202ENST00000373129 FAM50AQ14320 339 aaKnown RBP23.82■■□□□ 1.4
STK40-202ENST00000373129 VPS8Q8N3P4 1428 aa23.75■■□□□ 1.39
STK40-202ENST00000373129 PRXQ9BXM0 1461 aa23.69■■□□□ 1.38
STK40-202ENST00000373129 KIF21BO75037 1637 aa23.68■■□□□ 1.38
STK40-202ENST00000373129 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
STK40-202ENST00000373129 POLA1P09884 1462 aaPredicted RBP23.66■■□□□ 1.38
STK40-202ENST00000373129 TOPBP1Q92547 1522 aa23.65■■□□□ 1.38
STK40-202ENST00000373129 PDS5BQ9NTI5 1447 aa23.63■■□□□ 1.37
STK40-202ENST00000373129 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
STK40-202ENST00000373129 FHOD3Q2V2M9 1422 aa23.61■■□□□ 1.37
STK40-202ENST00000373129 AQRO60306 1485 aaKnown RBP eCLIP23.61■■□□□ 1.377e-7■■■■■ 40.5
STK40-202ENST00000373129 URB2Q14146 1524 aaKnown RBP23.58■■□□□ 1.37
STK40-202ENST00000373129 ERCC6Q03468 1493 aa23.56■■□□□ 1.36
STK40-202ENST00000373129 ARHGAP35Q9NRY4 1499 aa23.53■■□□□ 1.36
STK40-202ENST00000373129 NEUROD1Q13562 356 aa23.49■■□□□ 1.35
STK40-202ENST00000373129 CHMP7Q8WUX9 453 aaPredicted RBP23.45■■□□□ 1.34
STK40-202ENST00000373129 YTHDC1Q96MU7 727 aaKnown RBP23.44■■□□□ 1.34
STK40-202ENST00000373129 CHIC2Q9UKJ5 165 aa23.44■■□□□ 1.34
STK40-202ENST00000373129 GAPVD1Q14C86 1478 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms