RNA–Protein interactions for RNA: ENST00000628415.2

EPB41L1-218, Transcript of erythrocyte membrane protein band 4.1 like 1, humanhuman

TSL 2 BASIC

Gene EPB41L1, Length 3,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L1-218ENST00000628415 NISCHQ9Y2I1 1504 aa22.34■■□□□ 1.17
EPB41L1-218ENST00000628415 DCAF8L2P0C7V8 631 aa20.3■□□□□ 0.84
EPB41L1-218ENST00000628415 SHROOM4Q9ULL8 1493 aa20.27■□□□□ 0.84
EPB41L1-218ENST00000628415 SUPT5HO00267 1087 aaKnown RBP19.8■□□□□ 0.76
EPB41L1-218ENST00000628415 EHMT2Q96KQ7 1210 aa18.91■□□□□ 0.62
EPB41L1-218ENST00000628415 ZCCHC6Q5VYS8 1495 aaKnown RBP18.71■□□□□ 0.59
EPB41L1-218ENST00000628415 ABCC9O60706 1549 aa18.65■□□□□ 0.58
EPB41L1-218ENST00000628415 FAM9AQ8IZU1 332 aaPredicted RBP18.54■□□□□ 0.56
EPB41L1-218ENST00000628415 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
EPB41L1-218ENST00000628415 LOC105371045A0A1W2PR82 267 aa18.48■□□□□ 0.55
EPB41L1-218ENST00000628415 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
EPB41L1-218ENST00000628415 MYO15BQ96JP2 1530 aa18.3■□□□□ 0.52
EPB41L1-218ENST00000628415 SCRIBQ14160 1630 aa18.27■□□□□ 0.52
EPB41L1-218ENST00000628415 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
EPB41L1-218ENST00000628415 PABPN1Q86U42 306 aaKnown RBP eCLIP18.22■□□□□ 0.51
EPB41L1-218ENST00000628415 PPARGC1BQ86YN6 1023 aaKnown RBP18.15■□□□□ 0.5
EPB41L1-218ENST00000628415 TTBK1Q5TCY1 1321 aaPredicted RBP18.11■□□□□ 0.49
EPB41L1-218ENST00000628415 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
EPB41L1-218ENST00000628415 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
EPB41L1-218ENST00000628415 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
EPB41L1-218ENST00000628415 RSF1Q96T23 1441 aaPredicted RBP17.85■□□□□ 0.45
EPB41L1-218ENST00000628415 DCAF1Q9Y4B6 1507 aa17.69■□□□□ 0.42
EPB41L1-218ENST00000628415 RB1CC1Q8TDY2 1594 aa17.66■□□□□ 0.42
EPB41L1-218ENST00000628415 MROH2BQ7Z745 1585 aa17.63■□□□□ 0.41
EPB41L1-218ENST00000628415 HRCP23327 699 aa17.5■□□□□ 0.39
EPB41L1-218ENST00000628415 WIZO95785 1651 aa17.49■□□□□ 0.39
EPB41L1-218ENST00000628415 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
EPB41L1-218ENST00000628415 NACADO15069 1562 aa17.42■□□□□ 0.38
EPB41L1-218ENST00000628415 TRIM26Q12899 539 aaPredicted RBP17.34■□□□□ 0.37
EPB41L1-218ENST00000628415 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
EPB41L1-218ENST00000628415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
EPB41L1-218ENST00000628415 SOGA1O94964 1423 aa17.18■□□□□ 0.34
EPB41L1-218ENST00000628415 CCDC88BA6NC98 1476 aa17.18■□□□□ 0.34
EPB41L1-218ENST00000628415 RUSC2Q8N2Y8 1516 aa17.13■□□□□ 0.33
EPB41L1-218ENST00000628415 CCER1Q8TC90 406 aaPredicted RBP17.1■□□□□ 0.33
EPB41L1-218ENST00000628415 BAZ1AQ9NRL2 1556 aaPredicted RBP17.09■□□□□ 0.33
EPB41L1-218ENST00000628415 HNRNPUL2Q1KMD3 747 aaKnown RBP17.09■□□□□ 0.33
EPB41L1-218ENST00000628415 CSRNP3Q8WYN3 585 aa17.06■□□□□ 0.32
EPB41L1-218ENST00000628415 ATP1B4Q9UN42 357 aaPredicted RBP17.01■□□□□ 0.31
EPB41L1-218ENST00000628415 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
EPB41L1-218ENST00000628415 PELP1Q8IZL8 1130 aaKnown RBP16.97■□□□□ 0.31
EPB41L1-218ENST00000628415 ITGAEP38570 1179 aa16.97■□□□□ 0.31
EPB41L1-218ENST00000628415 UNC13AQ9UPW8 1703 aa16.96■□□□□ 0.31
EPB41L1-218ENST00000628415 BICRAQ9NZM4 1560 aa16.92■□□□□ 0.3
EPB41L1-218ENST00000628415 P3H3Q8IVL6 736 aa16.91■□□□□ 0.3
EPB41L1-218ENST00000628415 DNAJC5BQ9UF47 199 aa16.9■□□□□ 0.3
EPB41L1-218ENST00000628415 SMARCA2P51531 1590 aa16.88■□□□□ 0.29
EPB41L1-218ENST00000628415 BAZ1BQ9UIG0 1483 aaKnown RBP16.88■□□□□ 0.29
EPB41L1-218ENST00000628415 TOP2AP11388 1531 aaKnown RBP16.87■□□□□ 0.29
EPB41L1-218ENST00000628415 APLP2Q06481 763 aa16.87■□□□□ 0.29
EPB41L1-218ENST00000628415 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
EPB41L1-218ENST00000628415 CEP162Q5TB80 1403 aa16.82■□□□□ 0.28
EPB41L1-218ENST00000628415 ATAD2BQ9ULI0 1458 aa16.81■□□□□ 0.28
EPB41L1-218ENST00000628415 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
EPB41L1-218ENST00000628415 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
EPB41L1-218ENST00000628415 SYNJ1O43426 1573 aa16.63■□□□□ 0.25
EPB41L1-218ENST00000628415 RAPGEF2Q9Y4G8 1499 aa16.63■□□□□ 0.25
EPB41L1-218ENST00000628415 CLIP1P30622 1438 aa16.6■□□□□ 0.25
EPB41L1-218ENST00000628415 KANK4Q5T7N3 995 aaPredicted RBP16.6■□□□□ 0.25
EPB41L1-218ENST00000628415 ZEB1P37275 1124 aaPredicted RBP16.57■□□□□ 0.24
EPB41L1-218ENST00000628415 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
EPB41L1-218ENST00000628415 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
EPB41L1-218ENST00000628415 EIF4G1Q04637 1599 aaKnown RBP16.56■□□□□ 0.24
EPB41L1-218ENST00000628415 GOLGA3Q08378 1498 aa16.53■□□□□ 0.24
EPB41L1-218ENST00000628415 FAM50AQ14320 339 aaKnown RBP16.48■□□□□ 0.23
EPB41L1-218ENST00000628415 NESP48681 1621 aa16.46■□□□□ 0.23
EPB41L1-218ENST00000628415 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
EPB41L1-218ENST00000628415 CUX2O14529 1486 aa16.41■□□□□ 0.22
EPB41L1-218ENST00000628415 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
EPB41L1-218ENST00000628415 NEUROD1Q13562 356 aa16.38■□□□□ 0.21
EPB41L1-218ENST00000628415 FBLN2P98095 1184 aa16.38■□□□□ 0.21
EPB41L1-218ENST00000628415 HIRIP3Q9BW71 556 aaPredicted RBP16.37■□□□□ 0.21
EPB41L1-218ENST00000628415 TDRD9Q8NDG6 1382 aaKnown RBP16.36■□□□□ 0.21
EPB41L1-218ENST00000628415 RAD54L2Q9Y4B4 1467 aa16.35■□□□□ 0.21
EPB41L1-218ENST00000628415 MYT1Q01538 1121 aa16.34■□□□□ 0.21
EPB41L1-218ENST00000628415 CUX1P39880 1505 aa16.34■□□□□ 0.21
EPB41L1-218ENST00000628415 EEA1Q15075 1411 aa16.32■□□□□ 0.2
EPB41L1-218ENST00000628415 NCAPD3P42695 1498 aa16.31■□□□□ 0.2
EPB41L1-218ENST00000628415 KIF27Q86VH2 1401 aa16.31■□□□□ 0.2
EPB41L1-218ENST00000628415 CADPSQ9ULU8 1353 aa16.3■□□□□ 0.2
EPB41L1-218ENST00000628415 VPS8Q8N3P4 1428 aa16.26■□□□□ 0.19
EPB41L1-218ENST00000628415 CC2D2AQ9P2K1 1620 aa16.26■□□□□ 0.19
EPB41L1-218ENST00000628415 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
EPB41L1-218ENST00000628415 CNGB1Q14028 1251 aaPredicted RBP16.25■□□□□ 0.19
EPB41L1-218ENST00000628415 PEG3Q9GZU2 1588 aa16.24■□□□□ 0.19
EPB41L1-218ENST00000628415 ARAP1Q96P48 1450 aa16.23■□□□□ 0.19
EPB41L1-218ENST00000628415 IGF1RP08069 1367 aa16.23■□□□□ 0.19
EPB41L1-218ENST00000628415 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
EPB41L1-218ENST00000628415 MIER1Q8N108 512 aa16.22■□□□□ 0.19
EPB41L1-218ENST00000628415 FGD5Q6ZNL6 1462 aa16.21■□□□□ 0.19
EPB41L1-218ENST00000628415 KIF21BO75037 1637 aa16.2■□□□□ 0.18
EPB41L1-218ENST00000628415 CFTRP13569 1480 aa16.2■□□□□ 0.18
EPB41L1-218ENST00000628415 SIN3AQ96ST3 1273 aa16.2■□□□□ 0.18
EPB41L1-218ENST00000628415 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
EPB41L1-218ENST00000628415 FANCD2Q9BXW9 1451 aa16.18■□□□□ 0.18
EPB41L1-218ENST00000628415 FHOD3Q2V2M9 1422 aa16.17■□□□□ 0.18
EPB41L1-218ENST00000628415 TOP2BQ02880 1626 aa16.16■□□□□ 0.18
EPB41L1-218ENST00000628415 GTF3C3Q9Y5Q9 886 aa16.11■□□□□ 0.17
EPB41L1-218ENST00000628415 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
EPB41L1-218ENST00000628415 RRP7BPQ9NSQ0 103 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms