RNA–Protein interactions for RNA: ENST00000422223.6

FREM1-204, Transcript of FRAS1 related extracellular matrix 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FREM1, Length 10,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-204ENST00000422223 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
FREM1-204ENST00000422223 MYT1Q01538 1121 aa14.46□□□□□ -0.09
FREM1-204ENST00000422223 ERICH6Q7L0X2 663 aa14.39□□□□□ -0.11
FREM1-204ENST00000422223 CCER1Q8TC90 406 aaPredicted RBP14.36□□□□□ -0.11
FREM1-204ENST00000422223 DCAF8L2P0C7V8 631 aa14.11□□□□□ -0.15
FREM1-204ENST00000422223 YTHDC1Q96MU7 727 aaKnown RBP13.97□□□□□ -0.17
FREM1-204ENST00000422223 CENPBP07199 599 aaPredicted RBP13.9□□□□□ -0.18
FREM1-204ENST00000422223 APLP2Q06481 763 aa13.73□□□□□ -0.21
FREM1-204ENST00000422223 TTBK1Q5TCY1 1321 aaPredicted RBP13.72□□□□□ -0.21
FREM1-204ENST00000422223 NEFLP07196 543 aa13.7□□□□□ -0.22
FREM1-204ENST00000422223 FAM9AQ8IZU1 332 aaPredicted RBP13.63□□□□□ -0.23
FREM1-204ENST00000422223 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
FREM1-204ENST00000422223 ZEB1P37275 1124 aaPredicted RBP13.52□□□□□ -0.25
FREM1-204ENST00000422223 SUPT5HO00267 1087 aaKnown RBP13.51□□□□□ -0.25
FREM1-204ENST00000422223 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
FREM1-204ENST00000422223 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
FREM1-204ENST00000422223 PCGF6Q9BYE7 350 aa13.25□□□□□ -0.29
FREM1-204ENST00000422223 ZNF316A6NFI3 1004 aaPredicted RBP13.22□□□□□ -0.29
FREM1-204ENST00000422223 GLIPR1L2Q4G1C9 344 aa12.99□□□□□ -0.33
FREM1-204ENST00000422223 CLSPNQ9HAW4 1339 aa12.95□□□□□ -0.34
FREM1-204ENST00000422223 SHROOM4Q9ULL8 1493 aa12.92□□□□□ -0.34
FREM1-204ENST00000422223 ATP1B4Q9UN42 357 aaPredicted RBP12.88□□□□□ -0.35
FREM1-204ENST00000422223 ANP32BQ92688 251 aaKnown RBP12.74□□□□□ -0.37
FREM1-204ENST00000422223 RANGAP1P46060 587 aaPredicted RBP12.73□□□□□ -0.37
FREM1-204ENST00000422223 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
FREM1-204ENST00000422223 POLR3GLQ9BT43 218 aa12.7□□□□□ -0.38
FREM1-204ENST00000422223 EIF5BO60841 1220 aaKnown RBP12.69□□□□□ -0.38
FREM1-204ENST00000422223 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
FREM1-204ENST00000422223 CDK11AQ9UQ88 783 aaPredicted RBP12.65□□□□□ -0.38
FREM1-204ENST00000422223 TRIM41Q8WV44 630 aa12.59□□□□□ -0.39
FREM1-204ENST00000422223 SLC4A1APQ9BWU0 796 aaKnown RBP12.59□□□□□ -0.39
FREM1-204ENST00000422223 MYT1LQ9UL68 1186 aa12.57□□□□□ -0.4
FREM1-204ENST00000422223 ANP32AP39687 249 aaKnown RBP12.55□□□□□ -0.4
FREM1-204ENST00000422223 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
FREM1-204ENST00000422223 HRCP23327 699 aa12.55□□□□□ -0.4
FREM1-204ENST00000422223 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
FREM1-204ENST00000422223 NEFMP07197 916 aa12.45□□□□□ -0.42
FREM1-204ENST00000422223 CNGB1Q14028 1251 aaPredicted RBP12.44□□□□□ -0.42
FREM1-204ENST00000422223 CANXP27824 592 aaKnown RBP12.42□□□□□ -0.42
FREM1-204ENST00000422223 DIEXFQ68CQ4 756 aaKnown RBP12.41□□□□□ -0.42
FREM1-204ENST00000422223 CDK11BP21127 795 aaKnown RBP12.41□□□□□ -0.42
FREM1-204ENST00000422223 HSP90AA1P07900 732 aaKnown RBP12.4□□□□□ -0.42
FREM1-204ENST00000422223 NISCHQ9Y2I1 1504 aa12.37□□□□□ -0.43
FREM1-204ENST00000422223 UPF2Q9HAU5 1272 aaKnown RBP12.34□□□□□ -0.43
FREM1-204ENST00000422223 ITGAEP38570 1179 aa12.32□□□□□ -0.44
FREM1-204ENST00000422223 BCANQ96GW7 911 aa12.3□□□□□ -0.44
FREM1-204ENST00000422223 ANP32CO43423 234 aa12.3□□□□□ -0.44
FREM1-204ENST00000422223 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.29□□□□□ -0.44
FREM1-204ENST00000422223 HNRNPUL2Q1KMD3 747 aaKnown RBP12.29□□□□□ -0.44
FREM1-204ENST00000422223 GTF3C3Q9Y5Q9 886 aa12.28□□□□□ -0.44
FREM1-204ENST00000422223 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
FREM1-204ENST00000422223 TRIM44Q96DX7 344 aaPredicted RBP12.27□□□□□ -0.45
FREM1-204ENST00000422223 CHIC1Q5VXU3 224 aa12.27□□□□□ -0.45
FREM1-204ENST00000422223 PPARGC1BQ86YN6 1023 aaKnown RBP12.24□□□□□ -0.45
FREM1-204ENST00000422223 NPM2Q86SE8 214 aaKnown RBP12.23□□□□□ -0.45
FREM1-204ENST00000422223 BCL11AQ9H165 835 aa12.22□□□□□ -0.45
FREM1-204ENST00000422223 ANP32EQ9BTT0 268 aa12.17□□□□□ -0.46
FREM1-204ENST00000422223 NCLP19338 710 aaKnown RBP12.13□□□□□ -0.47
FREM1-204ENST00000422223 NBR1Q14596 966 aa12.07□□□□□ -0.48
FREM1-204ENST00000422223 TRIM52Q96A61 297 aa12.04□□□□□ -0.48
FREM1-204ENST00000422223 ARXQ96QS3 562 aa12.04□□□□□ -0.48
FREM1-204ENST00000422223 GOLGA6L22H0YM25 854 aa12.02□□□□□ -0.49
FREM1-204ENST00000422223 DNTTIP2Q5QJE6 756 aaKnown RBP12.01□□□□□ -0.49
FREM1-204ENST00000422223 ZRSR1Q15695 479 aaKnown RBP12.01□□□□□ -0.49
FREM1-204ENST00000422223 ERICH6BQ5W0A0 696 aa12.01□□□□□ -0.49
FREM1-204ENST00000422223 GOLGA6L2Q8N9W4 650 aaPredicted RBP12□□□□□ -0.49
FREM1-204ENST00000422223 BECN1Q14457 450 aa12□□□□□ -0.49
FREM1-204ENST00000422223 DDRGK1Q96HY6 314 aa11.99□□□□□ -0.49
FREM1-204ENST00000422223 FAM50AQ14320 339 aaKnown RBP11.99□□□□□ -0.49
FREM1-204ENST00000422223 ACIN1Q9UKV3 1341 aaKnown RBP11.99□□□□□ -0.49
FREM1-204ENST00000422223 PTMAP06454 111 aaKnown RBP11.99□□□□□ -0.49
FREM1-204ENST00000422223 NEUROD1Q13562 356 aa11.99□□□□□ -0.49
FREM1-204ENST00000422223 GOLGA6L6A8MZA4 724 aa11.97□□□□□ -0.49
FREM1-204ENST00000422223 NAP1L5Q96NT1 182 aaPredicted RBP11.94□□□□□ -0.5
FREM1-204ENST00000422223 ZNF326Q5BKZ1 582 aaKnown RBP11.94□□□□□ -0.5
FREM1-204ENST00000422223 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
FREM1-204ENST00000422223 FKBP8Q14318 412 aa11.91□□□□□ -0.5
FREM1-204ENST00000422223 NRDCO43847 1150 aa11.9□□□□□ -0.5
FREM1-204ENST00000422223 CHAF1AQ13111 956 aaPredicted RBP11.9□□□□□ -0.5
FREM1-204ENST00000422223 L1TD1Q5T7N2 865 aaKnown RBP11.89□□□□□ -0.51
FREM1-204ENST00000422223 CCDC136Q96JN2 1154 aa11.89□□□□□ -0.51
FREM1-204ENST00000422223 CALRP27797 417 aaKnown RBP11.85□□□□□ -0.51
FREM1-204ENST00000422223 CASC1Q6TDU7 716 aa11.81□□□□□ -0.52
FREM1-204ENST00000422223 TNNT3P45378 269 aaPredicted RBP11.81□□□□□ -0.52
FREM1-204ENST00000422223 AMER1Q5JTC6 1135 aaPredicted RBP11.8□□□□□ -0.52
FREM1-204ENST00000422223 PPM1GO15355 546 aaPredicted RBP11.77□□□□□ -0.53
FREM1-204ENST00000422223 HNRNPUQ00839 825 aaKnown RBP eCLIP11.75□□□□□ -0.536e-7■■■■□ 23
FREM1-204ENST00000422223 MSNP26038 577 aaKnown RBP11.75□□□□□ -0.53
FREM1-204ENST00000422223 USP35Q9P2H5 1018 aa11.74□□□□□ -0.53
FREM1-204ENST00000422223 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.53
FREM1-204ENST00000422223 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.54
FREM1-204ENST00000422223 SETQ01105 290 aaPredicted RBP11.7□□□□□ -0.54
FREM1-204ENST00000422223 LOC105371045A0A1W2PR82 267 aa11.7□□□□□ -0.54
FREM1-204ENST00000422223 TULP1O00294 542 aaPredicted RBP11.69□□□□□ -0.54
FREM1-204ENST00000422223 NOC3LQ8WTT2 800 aaKnown RBP11.69□□□□□ -0.54
FREM1-204ENST00000422223 GOLGA6L1Q8N7Z2 621 aa11.68□□□□□ -0.54
FREM1-204ENST00000422223 TMC1Q8TDI8 760 aa11.68□□□□□ -0.54
FREM1-204ENST00000422223 PLCB2Q00722 1185 aa11.66□□□□□ -0.54
FREM1-204ENST00000422223 PTMSP20962 102 aa11.66□□□□□ -0.54
FREM1-204ENST00000422223 FAM9BQ8IZU0 186 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms