RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 DCAF8L2P0C7V8 631 aa13.31□□□□□ -0.28
PRKCA-202ENST00000413366 MYT1Q01538 1121 aa12.85□□□□□ -0.35
PRKCA-202ENST00000413366 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
PRKCA-202ENST00000413366 FAM9AQ8IZU1 332 aaPredicted RBP12.21□□□□□ -0.45
PRKCA-202ENST00000413366 SUPT5HO00267 1087 aaKnown RBP12.11□□□□□ -0.47
PRKCA-202ENST00000413366 NISCHQ9Y2I1 1504 aa12.05□□□□□ -0.48
PRKCA-202ENST00000413366 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.48
PRKCA-202ENST00000413366 SHROOM4Q9ULL8 1493 aa11.97□□□□□ -0.49
PRKCA-202ENST00000413366 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.49
PRKCA-202ENST00000413366 APLP2Q06481 763 aa11.93□□□□□ -0.5
PRKCA-202ENST00000413366 ERICH6Q7L0X2 663 aa11.74□□□□□ -0.53
PRKCA-202ENST00000413366 CCER1Q8TC90 406 aaPredicted RBP11.69□□□□□ -0.54
PRKCA-202ENST00000413366 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
PRKCA-202ENST00000413366 RANGAP1P46060 587 aaPredicted RBP11.59□□□□□ -0.55
PRKCA-202ENST00000413366 CENPBP07199 599 aaPredicted RBP11.56□□□□□ -0.56
PRKCA-202ENST00000413366 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
PRKCA-202ENST00000413366 ZEB1P37275 1124 aaPredicted RBP11.44□□□□□ -0.58
PRKCA-202ENST00000413366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.31□□□□□ -0.6
PRKCA-202ENST00000413366 HNRNPUL2Q1KMD3 747 aaKnown RBP11.31□□□□□ -0.6
PRKCA-202ENST00000413366 UBTFP17480 764 aaKnown RBP11.31□□□□□ -0.6
PRKCA-202ENST00000413366 YTHDC1Q96MU7 727 aaKnown RBP11.3□□□□□ -0.6
PRKCA-202ENST00000413366 TRIM41Q8WV44 630 aa11.28□□□□□ -0.6
PRKCA-202ENST00000413366 CHIC1Q5VXU3 224 aa11.24□□□□□ -0.61
PRKCA-202ENST00000413366 NEFLP07196 543 aa11.23□□□□□ -0.61
PRKCA-202ENST00000413366 HRCP23327 699 aa11.19□□□□□ -0.62
PRKCA-202ENST00000413366 PCGF6Q9BYE7 350 aa11.15□□□□□ -0.62
PRKCA-202ENST00000413366 DAXXQ9UER7 740 aaPredicted RBP11.08□□□□□ -0.64
PRKCA-202ENST00000413366 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
PRKCA-202ENST00000413366 POLR3GLQ9BT43 218 aa11.03□□□□□ -0.64
PRKCA-202ENST00000413366 ITGAEP38570 1179 aa10.95□□□□□ -0.66
PRKCA-202ENST00000413366 ABCC9O60706 1549 aa10.93□□□□□ -0.66
PRKCA-202ENST00000413366 FBLN2P98095 1184 aa10.92□□□□□ -0.66
PRKCA-202ENST00000413366 RTL5Q5HYW3 569 aaPredicted RBP10.91□□□□□ -0.66
PRKCA-202ENST00000413366 PABPN1Q86U42 306 aaKnown RBP eCLIP10.89□□□□□ -0.67
PRKCA-202ENST00000413366 BCANQ96GW7 911 aa10.88□□□□□ -0.67
PRKCA-202ENST00000413366 CLSPNQ9HAW4 1339 aa10.83□□□□□ -0.68
PRKCA-202ENST00000413366 GLIPR1L2Q4G1C9 344 aa10.82□□□□□ -0.68
PRKCA-202ENST00000413366 PPARGC1BQ86YN6 1023 aaKnown RBP10.82□□□□□ -0.68
PRKCA-202ENST00000413366 CNGB1Q14028 1251 aaPredicted RBP10.8□□□□□ -0.68
PRKCA-202ENST00000413366 ZNF316A6NFI3 1004 aaPredicted RBP10.8□□□□□ -0.68
PRKCA-202ENST00000413366 ESF1Q9H501 851 aaKnown RBP10.79□□□□□ -0.68
PRKCA-202ENST00000413366 TRIM26Q12899 539 aaPredicted RBP10.78□□□□□ -0.68
PRKCA-202ENST00000413366 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
PRKCA-202ENST00000413366 PLPPR3Q6T4P5 718 aa10.73□□□□□ -0.69
PRKCA-202ENST00000413366 TRIM52Q96A61 297 aa10.73□□□□□ -0.69
PRKCA-202ENST00000413366 FAM50AQ14320 339 aaKnown RBP10.72□□□□□ -0.69
PRKCA-202ENST00000413366 NPM1P06748 294 aaKnown RBP eCLIP10.67□□□□□ -0.7
PRKCA-202ENST00000413366 ACIN1Q9UKV3 1341 aaKnown RBP10.65□□□□□ -0.71
PRKCA-202ENST00000413366 ZBTB47Q9UFB7 747 aaPredicted RBP10.63□□□□□ -0.71
PRKCA-202ENST00000413366 STAG3Q9UJ98 1225 aa10.62□□□□□ -0.71
PRKCA-202ENST00000413366 GTF3C3Q9Y5Q9 886 aa10.62□□□□□ -0.71
PRKCA-202ENST00000413366 NEFMP07197 916 aa10.61□□□□□ -0.71
PRKCA-202ENST00000413366 ZNF326Q5BKZ1 582 aaKnown RBP10.58□□□□□ -0.72
PRKCA-202ENST00000413366 ARID3CA6NKF2 412 aa10.55□□□□□ -0.72
PRKCA-202ENST00000413366 BCL11AQ9H165 835 aa10.54□□□□□ -0.72
PRKCA-202ENST00000413366 ZNF777Q9ULD5 760 aaPredicted RBP10.52□□□□□ -0.72
PRKCA-202ENST00000413366 SCAF1Q9H7N4 1312 aaKnown RBP10.5□□□□□ -0.73
PRKCA-202ENST00000413366 CDK11AQ9UQ88 783 aaPredicted RBP10.49□□□□□ -0.73
PRKCA-202ENST00000413366 NEUROD1Q13562 356 aa10.49□□□□□ -0.73
PRKCA-202ENST00000413366 EIF5BO60841 1220 aaKnown RBP10.48□□□□□ -0.73
PRKCA-202ENST00000413366 DIEXFQ68CQ4 756 aaKnown RBP10.48□□□□□ -0.73
PRKCA-202ENST00000413366 CHGAP10645 457 aaKnown RBP10.47□□□□□ -0.73
PRKCA-202ENST00000413366 ANP32EQ9BTT0 268 aa10.47□□□□□ -0.73
PRKCA-202ENST00000413366 CANXP27824 592 aaKnown RBP10.47□□□□□ -0.73
PRKCA-202ENST00000413366 P3H3Q8IVL6 736 aa10.45□□□□□ -0.74
PRKCA-202ENST00000413366 A0A0G2JS52 829 aa10.43□□□□□ -0.74
PRKCA-202ENST00000413366 SCRIBQ14160 1630 aa10.38□□□□□ -0.75
PRKCA-202ENST00000413366 ANP32BQ92688 251 aaKnown RBP10.37□□□□□ -0.75
PRKCA-202ENST00000413366 LOC105371045A0A1W2PR82 267 aa10.37□□□□□ -0.75
PRKCA-202ENST00000413366 C14orf37Q86TY3 774 aa10.36□□□□□ -0.75
PRKCA-202ENST00000413366 ARID4BQ4LE39 1312 aaPredicted RBP10.35□□□□□ -0.75
PRKCA-202ENST00000413366 ANP32AP39687 249 aaKnown RBP10.35□□□□□ -0.75
PRKCA-202ENST00000413366 CHMP7Q8WUX9 453 aaPredicted RBP10.34□□□□□ -0.75
PRKCA-202ENST00000413366 HAP1P54257 671 aaPredicted RBP10.33□□□□□ -0.76
PRKCA-202ENST00000413366 ZBTB7CA1YPR0 619 aa10.32□□□□□ -0.76
PRKCA-202ENST00000413366 NPM2Q86SE8 214 aaKnown RBP10.3□□□□□ -0.76
PRKCA-202ENST00000413366 ANP32CO43423 234 aa10.3□□□□□ -0.76
PRKCA-202ENST00000413366 ERCC6Q03468 1493 aa10.29□□□□□ -0.76
PRKCA-202ENST00000413366 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
PRKCA-202ENST00000413366 ERICH6BQ5W0A0 696 aa10.29□□□□□ -0.76
PRKCA-202ENST00000413366 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.29□□□□□ -0.765e-7■■■□□ 18.4
PRKCA-202ENST00000413366 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
PRKCA-202ENST00000413366 PLEKHG5O94827 1062 aa10.27□□□□□ -0.77
PRKCA-202ENST00000413366 RB1CC1Q8TDY2 1594 aa10.23□□□□□ -0.77
PRKCA-202ENST00000413366 DCAF1Q9Y4B6 1507 aa10.21□□□□□ -0.77
PRKCA-202ENST00000413366 PRKCSHP14314 528 aaPredicted RBP10.21□□□□□ -0.78
PRKCA-202ENST00000413366 NCLP19338 710 aaKnown RBP10.2□□□□□ -0.78
PRKCA-202ENST00000413366 KCNH8Q96L42 1107 aa10.19□□□□□ -0.78
PRKCA-202ENST00000413366 TNNT2P45379 298 aaPredicted RBP10.18□□□□□ -0.78
PRKCA-202ENST00000413366 TSPY4P0CV99 314 aa10.17□□□□□ -0.78
PRKCA-202ENST00000413366 TSPY10P0CW01 314 aa10.17□□□□□ -0.78
PRKCA-202ENST00000413366 SENP3Q9H4L4 574 aaPredicted RBP10.17□□□□□ -0.78
PRKCA-202ENST00000413366 NPHP1O15259 732 aa10.15□□□□□ -0.78
PRKCA-202ENST00000413366 CSRNP3Q8WYN3 585 aa10.13□□□□□ -0.79
PRKCA-202ENST00000413366 ARXQ96QS3 562 aa10.12□□□□□ -0.79
PRKCA-202ENST00000413366 CCDC180Q9P1Z9 1646 aa10.12□□□□□ -0.79
PRKCA-202ENST00000413366 HSP90AA1P07900 732 aaKnown RBP10.12□□□□□ -0.79
PRKCA-202ENST00000413366 CDK11BP21127 795 aaKnown RBP10.11□□□□□ -0.79
PRKCA-202ENST00000413366 TONSLQ96HA7 1378 aa10.1□□□□□ -0.79
PRKCA-202ENST00000413366 CHIC2Q9UKJ5 165 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms