RNA–Protein interactions for RNA: ENST00000380880.3

FREM1-202, Transcript of FRAS1 related extracellular matrix 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FREM1, Length 7,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1-202ENST00000380880 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
FREM1-202ENST00000380880 PELP1Q8IZL8 1130 aaKnown RBP15.19■□□□□ 0.02
FREM1-202ENST00000380880 FAM9AQ8IZU1 332 aaPredicted RBP15.03■□□□□ -0
FREM1-202ENST00000380880 EHMT2Q96KQ7 1210 aa14.83□□□□□ -0.04
FREM1-202ENST00000380880 APLP2Q06481 763 aa14.79□□□□□ -0.04
FREM1-202ENST00000380880 SUPT5HO00267 1087 aaKnown RBP14.7□□□□□ -0.06
FREM1-202ENST00000380880 ERICH6Q7L0X2 663 aa14.68□□□□□ -0.06
FREM1-202ENST00000380880 CCER1Q8TC90 406 aaPredicted RBP14.54□□□□□ -0.08
FREM1-202ENST00000380880 ATP1B4Q9UN42 357 aaPredicted RBP14.37□□□□□ -0.11
FREM1-202ENST00000380880 TTBK1Q5TCY1 1321 aaPredicted RBP14.31□□□□□ -0.12
FREM1-202ENST00000380880 SHROOM4Q9ULL8 1493 aa14.24□□□□□ -0.13
FREM1-202ENST00000380880 RANGAP1P46060 587 aaPredicted RBP14.24□□□□□ -0.13
FREM1-202ENST00000380880 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.14
FREM1-202ENST00000380880 NEFLP07196 543 aa14.09□□□□□ -0.15
FREM1-202ENST00000380880 DAXXQ9UER7 740 aaPredicted RBP14.07□□□□□ -0.16
FREM1-202ENST00000380880 MYT1Q01538 1121 aa14.02□□□□□ -0.17
FREM1-202ENST00000380880 CENPBP07199 599 aaPredicted RBP14.01□□□□□ -0.17
FREM1-202ENST00000380880 PCGF6Q9BYE7 350 aa13.99□□□□□ -0.17
FREM1-202ENST00000380880 CHIC1Q5VXU3 224 aa13.97□□□□□ -0.17
FREM1-202ENST00000380880 SLC4A1APQ9BWU0 796 aaKnown RBP13.9□□□□□ -0.18
FREM1-202ENST00000380880 POLR3GLQ9BT43 218 aa13.87□□□□□ -0.19
FREM1-202ENST00000380880 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.82□□□□□ -0.2
FREM1-202ENST00000380880 HNRNPUL2Q1KMD3 747 aaKnown RBP13.82□□□□□ -0.2
FREM1-202ENST00000380880 YTHDC1Q96MU7 727 aaKnown RBP13.81□□□□□ -0.2
FREM1-202ENST00000380880 UBTFP17480 764 aaKnown RBP13.78□□□□□ -0.2
FREM1-202ENST00000380880 ZEB1P37275 1124 aaPredicted RBP13.66□□□□□ -0.22
FREM1-202ENST00000380880 CNGB1Q14028 1251 aaPredicted RBP13.65□□□□□ -0.22
FREM1-202ENST00000380880 CLSPNQ9HAW4 1339 aa13.64□□□□□ -0.23
FREM1-202ENST00000380880 ZNF316A6NFI3 1004 aaPredicted RBP13.64□□□□□ -0.23
FREM1-202ENST00000380880 TRIM41Q8WV44 630 aa13.59□□□□□ -0.23
FREM1-202ENST00000380880 SLC24A1O60721 1099 aa13.59□□□□□ -0.23
FREM1-202ENST00000380880 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
FREM1-202ENST00000380880 NISCHQ9Y2I1 1504 aa13.53□□□□□ -0.24
FREM1-202ENST00000380880 ITGAEP38570 1179 aa13.5□□□□□ -0.25
FREM1-202ENST00000380880 BCANQ96GW7 911 aa13.43□□□□□ -0.26
FREM1-202ENST00000380880 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
FREM1-202ENST00000380880 BCL11AQ9H165 835 aa13.37□□□□□ -0.27
FREM1-202ENST00000380880 PPARGC1BQ86YN6 1023 aaKnown RBP13.31□□□□□ -0.28
FREM1-202ENST00000380880 NEFMP07197 916 aa13.27□□□□□ -0.28
FREM1-202ENST00000380880 CANXP27824 592 aaKnown RBP13.2□□□□□ -0.3
FREM1-202ENST00000380880 TRIM52Q96A61 297 aa13.16□□□□□ -0.3
FREM1-202ENST00000380880 ESF1Q9H501 851 aaKnown RBP13.15□□□□□ -0.3
FREM1-202ENST00000380880 PLPPR3Q6T4P5 718 aa13.14□□□□□ -0.31
FREM1-202ENST00000380880 CDK11BP21127 795 aaKnown RBP13.11□□□□□ -0.31
FREM1-202ENST00000380880 CDK11AQ9UQ88 783 aaPredicted RBP13.11□□□□□ -0.31
FREM1-202ENST00000380880 FAM50AQ14320 339 aaKnown RBP13.07□□□□□ -0.32
FREM1-202ENST00000380880 ZNF326Q5BKZ1 582 aaKnown RBP13.07□□□□□ -0.32
FREM1-202ENST00000380880 A0A0G2JS52 829 aa13.04□□□□□ -0.32
FREM1-202ENST00000380880 FBLN2P98095 1184 aa13.04□□□□□ -0.32
FREM1-202ENST00000380880 SCAF1Q9H7N4 1312 aaKnown RBP13□□□□□ -0.33
FREM1-202ENST00000380880 STAG3Q9UJ98 1225 aa13□□□□□ -0.33
FREM1-202ENST00000380880 ANP32BQ92688 251 aaKnown RBP12.99□□□□□ -0.33
FREM1-202ENST00000380880 NEUROD1Q13562 356 aa12.94□□□□□ -0.34
FREM1-202ENST00000380880 HSP90AA1P07900 732 aaKnown RBP12.93□□□□□ -0.34
FREM1-202ENST00000380880 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
FREM1-202ENST00000380880 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
FREM1-202ENST00000380880 ANP32CO43423 234 aa12.84□□□□□ -0.35
FREM1-202ENST00000380880 TULP1O00294 542 aaPredicted RBP12.84□□□□□ -0.35
FREM1-202ENST00000380880 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
FREM1-202ENST00000380880 NPM1P06748 294 aaKnown RBP eCLIP12.76□□□□□ -0.37
FREM1-202ENST00000380880 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
FREM1-202ENST00000380880 UPF2Q9HAU5 1272 aaKnown RBP12.76□□□□□ -0.37
FREM1-202ENST00000380880 ANP32AP39687 249 aaKnown RBP12.75□□□□□ -0.37
FREM1-202ENST00000380880 HRCP23327 699 aa12.75□□□□□ -0.37
FREM1-202ENST00000380880 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
FREM1-202ENST00000380880 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
FREM1-202ENST00000380880 HAP1P54257 671 aaPredicted RBP12.73□□□□□ -0.37
FREM1-202ENST00000380880 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
FREM1-202ENST00000380880 ARID3CA6NKF2 412 aa12.7□□□□□ -0.38
FREM1-202ENST00000380880 C14orf37Q86TY3 774 aa12.69□□□□□ -0.38
FREM1-202ENST00000380880 NPHP1O15259 732 aa12.68□□□□□ -0.38
FREM1-202ENST00000380880 DIEXFQ68CQ4 756 aaKnown RBP12.67□□□□□ -0.38
FREM1-202ENST00000380880 EIF5BO60841 1220 aaKnown RBP12.67□□□□□ -0.38
FREM1-202ENST00000380880 ARXQ96QS3 562 aa12.67□□□□□ -0.38
FREM1-202ENST00000380880 MYH16Q9H6N6 1097 aa12.6□□□□□ -0.39
FREM1-202ENST00000380880 GLIPR1L2Q4G1C9 344 aa12.6□□□□□ -0.39
FREM1-202ENST00000380880 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
FREM1-202ENST00000380880 CLSTN1O94985 981 aa12.55□□□□□ -0.4
FREM1-202ENST00000380880 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.54□□□□□ -0.4
FREM1-202ENST00000380880 NCLP19338 710 aaKnown RBP12.53□□□□□ -0.4
FREM1-202ENST00000380880 P3H3Q8IVL6 736 aa12.52□□□□□ -0.41
FREM1-202ENST00000380880 LOC105371045A0A1W2PR82 267 aa12.51□□□□□ -0.41
FREM1-202ENST00000380880 PABPN1Q86U42 306 aaKnown RBP eCLIP12.51□□□□□ -0.417e-8■□□□□ 11.1
FREM1-202ENST00000380880 PPP1R15AO75807 674 aaPredicted RBP12.49□□□□□ -0.41
FREM1-202ENST00000380880 PRM3Q9NNZ6 103 aa12.49□□□□□ -0.41
FREM1-202ENST00000380880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.418e-9■■□□□ 12.1
FREM1-202ENST00000380880 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
FREM1-202ENST00000380880 WDR43Q15061 677 aaKnown RBP eCLIP12.48□□□□□ -0.41
FREM1-202ENST00000380880 ARID4BQ4LE39 1312 aaPredicted RBP12.46□□□□□ -0.41
FREM1-202ENST00000380880 SENP3Q9H4L4 574 aaPredicted RBP12.46□□□□□ -0.41
FREM1-202ENST00000380880 TRIM44Q96DX7 344 aaPredicted RBP12.45□□□□□ -0.42
FREM1-202ENST00000380880 TAOK2Q9UL54 1235 aa12.45□□□□□ -0.42
FREM1-202ENST00000380880 GOLGA2Q08379 1002 aa12.44□□□□□ -0.42
FREM1-202ENST00000380880 KRI1Q8N9T8 703 aaKnown RBP12.44□□□□□ -0.42
FREM1-202ENST00000380880 LMOD2Q6P5Q4 547 aa12.39□□□□□ -0.43
FREM1-202ENST00000380880 TPRNQ4KMQ1 711 aa12.39□□□□□ -0.43
FREM1-202ENST00000380880 ISY1Q9ULR0 285 aaKnown RBP12.39□□□□□ -0.43
FREM1-202ENST00000380880 CASC1Q6TDU7 716 aa12.37□□□□□ -0.43
FREM1-202ENST00000380880 TNNT2P45379 298 aaPredicted RBP12.35□□□□□ -0.43
FREM1-202ENST00000380880 TMC1Q8TDI8 760 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 1414 ms