RNA–Protein interactions for RNA: ENST00000284384.6

PRKCA-201, Transcript of protein kinase C alpha, humanhuman

TSL 5

Gene PRKCA, Length 2,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-201ENST00000284384 NISCHQ9Y2I1 1504 aa17.03■□□□□ 0.32
PRKCA-201ENST00000284384 SLC24A1O60721 1099 aa15.64■□□□□ 0.09
PRKCA-201ENST00000284384 CHIC1Q5VXU3 224 aa15.05■□□□□ 0
PRKCA-201ENST00000284384 CCDC180Q9P1Z9 1646 aa14.89□□□□□ -0.03
PRKCA-201ENST00000284384 EHMT2Q96KQ7 1210 aa14.69□□□□□ -0.06
PRKCA-201ENST00000284384 ZCCHC6Q5VYS8 1495 aaKnown RBP14.43□□□□□ -0.1
PRKCA-201ENST00000284384 PLPPR3Q6T4P5 718 aa14.27□□□□□ -0.12
PRKCA-201ENST00000284384 DCAF1Q9Y4B6 1507 aa14.24□□□□□ -0.13
PRKCA-201ENST00000284384 ABCC9O60706 1549 aa14.24□□□□□ -0.13
PRKCA-201ENST00000284384 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
PRKCA-201ENST00000284384 DAXXQ9UER7 740 aaPredicted RBP14.1□□□□□ -0.15
PRKCA-201ENST00000284384 AEBP2Q6ZN18 517 aaPredicted RBP14.05□□□□□ -0.16
PRKCA-201ENST00000284384 MYO15BQ96JP2 1530 aa13.98□□□□□ -0.17
PRKCA-201ENST00000284384 NCBP3Q53F19 620 aaKnown RBP13.93□□□□□ -0.18
PRKCA-201ENST00000284384 RB1CC1Q8TDY2 1594 aa13.88□□□□□ -0.19
PRKCA-201ENST00000284384 NACADO15069 1562 aa13.83□□□□□ -0.2
PRKCA-201ENST00000284384 SHROOM4Q9ULL8 1493 aa13.8□□□□□ -0.2
PRKCA-201ENST00000284384 AMER1Q5JTC6 1135 aaPredicted RBP13.78□□□□□ -0.2
PRKCA-201ENST00000284384 KCNA4P22459 653 aa13.68□□□□□ -0.22
PRKCA-201ENST00000284384 CSRNP3Q8WYN3 585 aa13.63□□□□□ -0.23
PRKCA-201ENST00000284384 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
PRKCA-201ENST00000284384 PRKCSHP14314 528 aaPredicted RBP13.57□□□□□ -0.24
PRKCA-201ENST00000284384 DCAF8L2P0C7V8 631 aa13.53□□□□□ -0.24
PRKCA-201ENST00000284384 UNC13AQ9UPW8 1703 aa13.53□□□□□ -0.24
PRKCA-201ENST00000284384 SCRIBQ14160 1630 aa13.5□□□□□ -0.25
PRKCA-201ENST00000284384 SUPT5HO00267 1087 aaKnown RBP13.43□□□□□ -0.26
PRKCA-201ENST00000284384 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
PRKCA-201ENST00000284384 ARXQ96QS3 562 aa13.33□□□□□ -0.28
PRKCA-201ENST00000284384 TTBK1Q5TCY1 1321 aaPredicted RBP13.32□□□□□ -0.28
PRKCA-201ENST00000284384 APLP2Q06481 763 aa13.32□□□□□ -0.28
PRKCA-201ENST00000284384 TIMELESSQ9UNS1 1208 aa13.27□□□□□ -0.28
PRKCA-201ENST00000284384 RSF1Q96T23 1441 aaPredicted RBP13.27□□□□□ -0.29
PRKCA-201ENST00000284384 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
PRKCA-201ENST00000284384 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
PRKCA-201ENST00000284384 MYT1Q01538 1121 aa13.2□□□□□ -0.3
PRKCA-201ENST00000284384 BAZ1AQ9NRL2 1556 aaPredicted RBP13.17□□□□□ -0.3
PRKCA-201ENST00000284384 ERICH6Q7L0X2 663 aa13.13□□□□□ -0.31
PRKCA-201ENST00000284384 TAOK2Q9UL54 1235 aa13.1□□□□□ -0.31
PRKCA-201ENST00000284384 MROH2BQ7Z745 1585 aa13.1□□□□□ -0.31
PRKCA-201ENST00000284384 TULP1O00294 542 aaPredicted RBP13.08□□□□□ -0.32
PRKCA-201ENST00000284384 PABPN1Q86U42 306 aaKnown RBP eCLIP13.08□□□□□ -0.32
PRKCA-201ENST00000284384 CECR2Q9BXF3 1484 aa13.07□□□□□ -0.32
PRKCA-201ENST00000284384 SMARCA4P51532 1647 aa13.06□□□□□ -0.32
PRKCA-201ENST00000284384 CC2D2AQ9P2K1 1620 aa13.04□□□□□ -0.32
PRKCA-201ENST00000284384 WIZO95785 1651 aa13.04□□□□□ -0.32
PRKCA-201ENST00000284384 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
PRKCA-201ENST00000284384 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
PRKCA-201ENST00000284384 PEG3Q9GZU2 1588 aa12.98□□□□□ -0.33
PRKCA-201ENST00000284384 RANGAP1P46060 587 aaPredicted RBP12.95□□□□□ -0.34
PRKCA-201ENST00000284384 BCANQ96GW7 911 aa12.92□□□□□ -0.34
PRKCA-201ENST00000284384 HOMEZQ8IX15 550 aa12.91□□□□□ -0.34
PRKCA-201ENST00000284384 SLC4A1APQ9BWU0 796 aaKnown RBP12.91□□□□□ -0.34
PRKCA-201ENST00000284384 TPRNQ4KMQ1 711 aa12.89□□□□□ -0.35
PRKCA-201ENST00000284384 HRCP23327 699 aa12.88□□□□□ -0.35
PRKCA-201ENST00000284384 SMARCA2P51531 1590 aa12.86□□□□□ -0.35
PRKCA-201ENST00000284384 CCDC88BA6NC98 1476 aa12.75□□□□□ -0.37
PRKCA-201ENST00000284384 KLHL34Q8N239 644 aa12.75□□□□□ -0.37
PRKCA-201ENST00000284384 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
PRKCA-201ENST00000284384 TRIM41Q8WV44 630 aa12.71□□□□□ -0.38
PRKCA-201ENST00000284384 PODXL2Q9NZ53 605 aa12.7□□□□□ -0.38
PRKCA-201ENST00000284384 NCAPD3P42695 1498 aa12.68□□□□□ -0.38
PRKCA-201ENST00000284384 ATAD2BQ9ULI0 1458 aa12.68□□□□□ -0.38
PRKCA-201ENST00000284384 HMGXB3Q12766 1538 aa12.67□□□□□ -0.38
PRKCA-201ENST00000284384 GTF3C3Q9Y5Q9 886 aa12.66□□□□□ -0.38
PRKCA-201ENST00000284384 CUX2O14529 1486 aa12.63□□□□□ -0.39
PRKCA-201ENST00000284384 BAZ1BQ9UIG0 1483 aaKnown RBP12.63□□□□□ -0.39
PRKCA-201ENST00000284384 EEA1Q15075 1411 aa12.62□□□□□ -0.39
PRKCA-201ENST00000284384 HAP1P54257 671 aaPredicted RBP12.61□□□□□ -0.39
PRKCA-201ENST00000284384 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
PRKCA-201ENST00000284384 PPARGC1BQ86YN6 1023 aaKnown RBP12.57□□□□□ -0.4
PRKCA-201ENST00000284384 ABCC8Q09428 1581 aa12.56□□□□□ -0.4
PRKCA-201ENST00000284384 PRDM2Q13029 1718 aa12.56□□□□□ -0.4
PRKCA-201ENST00000284384 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
PRKCA-201ENST00000284384 LOC105371045A0A1W2PR82 267 aa12.53□□□□□ -0.4
PRKCA-201ENST00000284384 BIVM-ERCC5R4GMW8 1640 aa12.5□□□□□ -0.41
PRKCA-201ENST00000284384 WRNQ14191 1432 aaPredicted RBP eCLIP12.49□□□□□ -0.41
PRKCA-201ENST00000284384 ZBTB22O15209 634 aa12.47□□□□□ -0.41
PRKCA-201ENST00000284384 LAMC3Q9Y6N6 1575 aa12.47□□□□□ -0.41
PRKCA-201ENST00000284384 TOP2BQ02880 1626 aa12.46□□□□□ -0.41
PRKCA-201ENST00000284384 KIF21BO75037 1637 aa12.46□□□□□ -0.41
PRKCA-201ENST00000284384 SYNJ1O43426 1573 aa12.46□□□□□ -0.42
PRKCA-201ENST00000284384 TRIM26Q12899 539 aaPredicted RBP12.42□□□□□ -0.42
PRKCA-201ENST00000284384 DNAJC5Q9H3Z4 198 aa12.42□□□□□ -0.42
PRKCA-201ENST00000284384 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
PRKCA-201ENST00000284384 TNIKQ9UKE5 1360 aa12.38□□□□□ -0.43
PRKCA-201ENST00000284384 GOLGA3Q08378 1498 aa12.38□□□□□ -0.43
PRKCA-201ENST00000284384 ERCC6Q03468 1493 aa12.37□□□□□ -0.43
PRKCA-201ENST00000284384 CFTRP13569 1480 aa12.37□□□□□ -0.43
PRKCA-201ENST00000284384 THOC2Q8NI27 1593 aaKnown RBP12.37□□□□□ -0.43
PRKCA-201ENST00000284384 ADRA2BP18089 450 aa12.37□□□□□ -0.43
PRKCA-201ENST00000284384 TMEM132AQ24JP5 1023 aa12.36□□□□□ -0.43
PRKCA-201ENST00000284384 CEP164Q9UPV0 1460 aa12.36□□□□□ -0.43
PRKCA-201ENST00000284384 SOGA1O94964 1423 aa12.35□□□□□ -0.43
PRKCA-201ENST00000284384 FAM9AQ8IZU1 332 aaPredicted RBP12.32□□□□□ -0.44
PRKCA-201ENST00000284384 ERICH3Q5RHP9 1530 aa12.31□□□□□ -0.44
PRKCA-201ENST00000284384 CEP162Q5TB80 1403 aa12.3□□□□□ -0.44
PRKCA-201ENST00000284384 PDS5BQ9NTI5 1447 aa12.29□□□□□ -0.44
PRKCA-201ENST00000284384 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
PRKCA-201ENST00000284384 VSIG10Q8N0Z9 540 aa12.26□□□□□ -0.45
PRKCA-201ENST00000284384 CUX1P39880 1505 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms