Protein–RNA interactions for Protein: P26196

DDX6, Probable ATP-dependent RNA helicase DDX6, humanhuman

Known RBP eCLIP

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX6P26196 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -08e-9■■■□□ 19.2
DDX6P26196 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.018e-9■■■□□ 19.2
DDX6P26196 COPB1-209ENST00000533096 547 ntTSL 414.04□□□□□ -0.163e-6■■■□□ 19.2
DDX6P26196 COPB1-206ENST00000529210 607 ntTSL 412.92□□□□□ -0.343e-6■■■□□ 19.2
DDX6P26196 COPB1-207ENST00000529866 729 ntTSL 211.32□□□□□ -0.63e-6■■■□□ 19.2
DDX6P26196 API5-201ENST00000378852 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.813e-6■■■□□ 19.2
DDX6P26196 COPB1-211ENST00000534234 1584 ntTSL 59.54□□□□□ -0.883e-6■■■□□ 19.2
DDX6P26196 COPB1-210ENST00000533533 537 ntTSL 49.31□□□□□ -0.923e-6■■■□□ 19.2
DDX6P26196 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.263e-6■■■□□ 19.2
DDX6P26196 COPB1-212ENST00000534771 576 ntTSL 41.42□□□□□ -2.183e-6■■■□□ 19.2
DDX6P26196 ATP7B-212ENST00000634519 727 ntTSL 313.84□□□□□ -0.191e-7■■■□□ 19.2
DDX6P26196 ATP7B-214ENST00000634810 5825 ntTSL 1 (best)13.45□□□□□ -0.261e-7■■■□□ 19.2
DDX6P26196 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.36□□□□□ -0.271e-7■■■□□ 19.2
DDX6P26196 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.431e-7■■■□□ 19.2
DDX6P26196 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.611e-7■■■□□ 19.2
DDX6P26196 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.951e-7■■■□□ 19.2
DDX6P26196 IGF2R-203ENST00000475584 597 ntTSL 316.21■□□□□ 0.192e-6■■■□□ 19.2
DDX6P26196 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.342e-6■■■□□ 19.2
DDX6P26196 PPT1-215ENST00000641471 2368 ntBASIC15.22■□□□□ 0.032e-6■■■□□ 19.2
DDX6P26196 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC14.95□□□□□ -0.022e-6■■■□□ 19.2
DDX6P26196 PPT1-212ENST00000641236 2481 nt14.16□□□□□ -0.142e-6■■■□□ 19.2
DDX6P26196 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-6■■■□□ 19.2
DDX6P26196 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC13.12□□□□□ -0.312e-6■■■□□ 19.2
DDX6P26196 PPT1-213ENST00000641319 2388 ntBASIC12.96□□□□□ -0.332e-6■■■□□ 19.2
DDX6P26196 PPT1-217ENST00000641691 2253 nt12.85□□□□□ -0.352e-6■■■□□ 19.2
DDX6P26196 PPT1-210ENST00000530704 2340 ntTSL 1 (best)11.99□□□□□ -0.492e-6■■■□□ 19.2
DDX6P26196 PPT1-219ENST00000642050 4010 ntAPPRIS P2 BASIC11.16□□□□□ -0.622e-6■■■□□ 19.2
DDX6P26196 PPT1-211ENST00000641083 2353 nt10.66□□□□□ -0.72e-6■■■□□ 19.2
DDX6P26196 PPT1-209ENST00000530076 1872 ntTSL 2 BASIC10.3□□□□□ -0.762e-6■■■□□ 19.2
DDX6P26196 CUTA-208ENST00000482684 837 ntTSL 1 (best)21.52■■□□□ 1.043e-7■■■□□ 19.2
DDX6P26196 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.663e-7■■■□□ 19.2
DDX6P26196 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.33e-7■■■□□ 19.2
DDX6P26196 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.023e-7■■■□□ 19.2
DDX6P26196 CUTA-201ENST00000374484 658 ntTSL 314.57□□□□□ -0.083e-7■■■□□ 19.2
DDX6P26196 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.57□□□□□ -0.083e-7■■■□□ 19.2
DDX6P26196 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.193e-7■■■□□ 19.2
DDX6P26196 CUTA-206ENST00000465956 961 ntTSL 212.27□□□□□ -0.453e-7■■■□□ 19.2
DDX6P26196 CUTA-211ENST00000488478 676 ntTSL 5 BASIC11.17□□□□□ -0.623e-7■■■□□ 19.2
DDX6P26196 CUTA-205ENST00000462802 1054 ntTSL 1 (best)10.53□□□□□ -0.723e-7■■■□□ 19.2
DDX6P26196 CUTA-209ENST00000487637 1378 ntTSL 210.52□□□□□ -0.723e-7■■■□□ 19.2
DDX6P26196 CUTA-213ENST00000494751 731 ntTSL 5 BASIC10.13□□□□□ -0.793e-7■■■□□ 19.2
DDX6P26196 CUTA-214ENST00000607266 661 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.833e-7■■■□□ 19.2
DDX6P26196 CUTA-207ENST00000479249 562 ntTSL 38.49□□□□□ -1.053e-7■■■□□ 19.2
DDX6P26196 FBXO5-203ENST00000477822 2610 ntTSL 26.31□□□□□ -1.43e-7■■■□□ 19.2
DDX6P26196 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.042e-7■■■□□ 19.1
DDX6P26196 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.04■□□□□ -01e-11■■■□□ 19.1
DDX6P26196 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.593e-6■■■□□ 19.1
DDX6P26196 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.12■■■□□ 2.093e-6■■■□□ 19.1
DDX6P26196 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.45■■□□□ 1.983e-6■■■□□ 19.1
DDX6P26196 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.823e-6■■■□□ 19.1
DDX6P26196 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.24■■□□□ 1.633e-6■■■□□ 19.1
DDX6P26196 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.57■□□□□ 0.243e-6■■■□□ 19.1
DDX6P26196 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.243e-6■■■□□ 19.1
DDX6P26196 HOXB3-213ENST00000552000 466 ntTSL 35.8□□□□□ -1.483e-6■■■□□ 19.1
DDX6P26196 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.68■□□□□ 0.11e-8■■■□□ 19.1
DDX6P26196 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.23□□□□□ -0.131e-8■■■□□ 19.1
DDX6P26196 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC13.5□□□□□ -0.251e-8■■■□□ 19.1
DDX6P26196 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.281e-8■■■□□ 19.1
DDX6P26196 PIP5K1A-203ENST00000368890 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.441e-8■■■□□ 19.1
DDX6P26196 AC079594.2-201ENST00000483754 3360 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.471e-8■■■□□ 19.1
DDX6P26196 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.511e-8■■■□□ 19.1
DDX6P26196 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.541e-8■■■□□ 19.1
DDX6P26196 TMEM38B-202ENST00000374692 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.571e-8■■■□□ 19.1
DDX6P26196 TRIM59-201ENST00000309784 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.611e-8■■■□□ 19.1
DDX6P26196 PIP5K1A-201ENST00000349792 3767 ntAPPRIS P3 TSL 1 (best)10.91□□□□□ -0.661e-8■■■□□ 19.1
DDX6P26196 KRIT1-204ENST00000394507 4762 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.921e-8■■■□□ 19.1
DDX6P26196 TRIM59-208ENST00000543469 4615 ntTSL 5 BASIC8.36□□□□□ -1.071e-8■■■□□ 19.1
DDX6P26196 KRIT1-222ENST00000486261 4057 ntTSL 1 (best)5.1□□□□□ -1.591e-8■■■□□ 19.1
DDX6P26196 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.99□□□□□ -1.771e-8■■■□□ 19.1
DDX6P26196 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.213e-6■■■□□ 19
DDX6P26196 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.143e-6■■■□□ 19
DDX6P26196 SPEN-201ENST00000375759 12232 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.867e-9■■■□□ 19
DDX6P26196 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.14e-28■■■□□ 19
DDX6P26196 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.034e-28■■■□□ 19
DDX6P26196 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC14.57□□□□□ -0.084e-28■■■□□ 19
DDX6P26196 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.14e-28■■■□□ 19
DDX6P26196 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.42□□□□□ -0.14e-28■■■□□ 19
DDX6P26196 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.24e-28■■■□□ 19
DDX6P26196 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC12.82□□□□□ -0.364e-28■■■□□ 19
DDX6P26196 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.12■■■□□ 2.097e-7■■■□□ 19
DDX6P26196 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.697e-7■■■□□ 19
DDX6P26196 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.172e-6■■■□□ 19
DDX6P26196 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.096e-9■■■□□ 19
DDX6P26196 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.41■□□□□ 0.541e-6■■■□□ 18.9
DDX6P26196 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.98■□□□□ 0.958e-8■■■□□ 18.9
DDX6P26196 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.088e-8■■■□□ 18.9
DDX6P26196 VASP-202ENST00000586014 1725 ntTSL 520.24■□□□□ 0.838e-34■■■□□ 18.9
DDX6P26196 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.168e-34■■■□□ 18.9
DDX6P26196 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.17■■□□□ 1.781e-6■■■□□ 18.9
DDX6P26196 TCEAL9-201ENST00000372656 992 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.361e-6■■■□□ 18.9
DDX6P26196 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.361e-6■■■□□ 18.9
DDX6P26196 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.38■□□□□ 0.218e-7■■■□□ 18.9
DDX6P26196 DEK-204ENST00000505224 1372 ntTSL 214.23□□□□□ -0.135e-10■■■□□ 18.9
DDX6P26196 NT5DC1-201ENST00000319550 6923 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.166e-6■■■□□ 18.9
DDX6P26196 CORO1C-216ENST00000551059 474 ntTSL 219.89■□□□□ 0.772e-7■■■□□ 18.8
DDX6P26196 CORO1C-214ENST00000550542 1245 ntTSL 519.51■□□□□ 0.712e-7■■■□□ 18.8
DDX6P26196 CORO1C-219ENST00000552871 587 ntTSL 319.51■□□□□ 0.712e-7■■■□□ 18.8
DDX6P26196 CORO1C-210ENST00000549384 891 ntTSL 519.26■□□□□ 0.672e-7■■■□□ 18.8
DDX6P26196 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.582e-7■■■□□ 18.8
DDX6P26196 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.25■■□□□ 1.152e-7■■■□□ 18.8
Retrieved 100 of 14,483 protein–RNA pairs in 161.9 ms