RNA–Protein interactions for RNA: ENST00000462802.5

CUTA-205, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 1 (best)

Gene CUTA, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-205ENST00000462802 NISCHQ9Y2I1 1504 aa23.23■■□□□ 1.31
CUTA-205ENST00000462802 CCDC180Q9P1Z9 1646 aa20.46■□□□□ 0.87
CUTA-205ENST00000462802 ZCCHC6Q5VYS8 1495 aaKnown RBP19.48■□□□□ 0.71
CUTA-205ENST00000462802 ABCC9O60706 1549 aa19.35■□□□□ 0.69
CUTA-205ENST00000462802 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
CUTA-205ENST00000462802 MYO15BQ96JP2 1530 aa19.25■□□□□ 0.67
CUTA-205ENST00000462802 NACADO15069 1562 aa19.11■□□□□ 0.65
CUTA-205ENST00000462802 DCAF8L2P0C7V8 631 aa19.04■□□□□ 0.64
CUTA-205ENST00000462802 RB1CC1Q8TDY2 1594 aa18.97■□□□□ 0.63
CUTA-205ENST00000462802 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
CUTA-205ENST00000462802 SCRIBQ14160 1630 aa18.59■□□□□ 0.57
CUTA-205ENST00000462802 UNC13AQ9UPW8 1703 aa18.5■□□□□ 0.55
CUTA-205ENST00000462802 BICRAQ9NZM4 1560 aa18.34■□□□□ 0.53
CUTA-205ENST00000462802 SUPT5HO00267 1087 aaKnown RBP18.19■□□□□ 0.5
CUTA-205ENST00000462802 PABPN1Q86U42 306 aaKnown RBP eCLIP18.15■□□□□ 0.5
CUTA-205ENST00000462802 BAZ1AQ9NRL2 1556 aaPredicted RBP17.99■□□□□ 0.47
CUTA-205ENST00000462802 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
CUTA-205ENST00000462802 SMARCA4P51532 1647 aa17.9■□□□□ 0.46
CUTA-205ENST00000462802 RSF1Q96T23 1441 aaPredicted RBP17.88■□□□□ 0.45
CUTA-205ENST00000462802 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
CUTA-205ENST00000462802 EIF4G1Q04637 1599 aaKnown RBP17.81■□□□□ 0.44
CUTA-205ENST00000462802 PEG3Q9GZU2 1588 aa17.79■□□□□ 0.44
CUTA-205ENST00000462802 SMARCA2P51531 1590 aa17.71■□□□□ 0.43
CUTA-205ENST00000462802 WIZO95785 1651 aa17.69■□□□□ 0.42
CUTA-205ENST00000462802 CHIC1Q5VXU3 224 aa17.69■□□□□ 0.42
CUTA-205ENST00000462802 ATAD2BQ9ULI0 1458 aa17.67■□□□□ 0.42
CUTA-205ENST00000462802 NCAPD3P42695 1498 aa17.62■□□□□ 0.41
CUTA-205ENST00000462802 TOP2AP11388 1531 aaKnown RBP17.6■□□□□ 0.41
CUTA-205ENST00000462802 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.41
CUTA-205ENST00000462802 HMGXB3Q12766 1538 aa17.58■□□□□ 0.41
CUTA-205ENST00000462802 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
CUTA-205ENST00000462802 CCDC88BA6NC98 1476 aa17.36■□□□□ 0.37
CUTA-205ENST00000462802 DNAJC5BQ9UF47 199 aa17.25■□□□□ 0.35
CUTA-205ENST00000462802 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
CUTA-205ENST00000462802 CFTRP13569 1480 aa17.13■□□□□ 0.33
CUTA-205ENST00000462802 CADPSQ9ULU8 1353 aa17.11■□□□□ 0.33
CUTA-205ENST00000462802 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
CUTA-205ENST00000462802 LAMC3Q9Y6N6 1575 aa17.06■□□□□ 0.32
CUTA-205ENST00000462802 EEA1Q15075 1411 aa16.95■□□□□ 0.3
CUTA-205ENST00000462802 PDS5BQ9NTI5 1447 aa16.92■□□□□ 0.3
CUTA-205ENST00000462802 NESP48681 1621 aa16.9■□□□□ 0.3
CUTA-205ENST00000462802 FANCD2Q9BXW9 1451 aa16.88■□□□□ 0.29
CUTA-205ENST00000462802 LOC105371045A0A1W2PR82 267 aa16.88■□□□□ 0.29
CUTA-205ENST00000462802 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.296e-6■■■□□ 16.7
CUTA-205ENST00000462802 ABCC8Q09428 1581 aa16.82■□□□□ 0.28
CUTA-205ENST00000462802 CEP164Q9UPV0 1460 aa16.81■□□□□ 0.28
CUTA-205ENST00000462802 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
CUTA-205ENST00000462802 BIVM-ERCC5R4GMW8 1640 aa16.78■□□□□ 0.28
CUTA-205ENST00000462802 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
CUTA-205ENST00000462802 SYNJ1O43426 1573 aa16.74■□□□□ 0.27
CUTA-205ENST00000462802 CUX1P39880 1505 aa16.73■□□□□ 0.27
CUTA-205ENST00000462802 DNMBPQ6XZF7 1577 aa16.72■□□□□ 0.27
CUTA-205ENST00000462802 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
CUTA-205ENST00000462802 FAM9AQ8IZU1 332 aaPredicted RBP16.71■□□□□ 0.27
CUTA-205ENST00000462802 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
CUTA-205ENST00000462802 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
CUTA-205ENST00000462802 ERCC6Q03468 1493 aa16.67■□□□□ 0.26
CUTA-205ENST00000462802 URB2Q14146 1524 aaKnown RBP16.66■□□□□ 0.26
CUTA-205ENST00000462802 CSRNP3Q8WYN3 585 aa16.63■□□□□ 0.25
CUTA-205ENST00000462802 WDR62O43379 1518 aa16.62■□□□□ 0.25
CUTA-205ENST00000462802 PCGF6Q9BYE7 350 aa16.62■□□□□ 0.25
CUTA-205ENST00000462802 TNIKQ9UKE5 1360 aa16.62■□□□□ 0.25
CUTA-205ENST00000462802 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
CUTA-205ENST00000462802 THOC2Q8NI27 1593 aaKnown RBP16.6■□□□□ 0.25
CUTA-205ENST00000462802 FGD5Q6ZNL6 1462 aa16.59■□□□□ 0.25
CUTA-205ENST00000462802 HRCP23327 699 aa16.58■□□□□ 0.24
CUTA-205ENST00000462802 KIF21BO75037 1637 aa16.58■□□□□ 0.24
CUTA-205ENST00000462802 POLA1P09884 1462 aaPredicted RBP16.57■□□□□ 0.24
CUTA-205ENST00000462802 SOGA1O94964 1423 aa16.56■□□□□ 0.24
CUTA-205ENST00000462802 ABCA10Q8WWZ4 1543 aa16.51■□□□□ 0.23
CUTA-205ENST00000462802 KIF27Q86VH2 1401 aa16.48■□□□□ 0.23
CUTA-205ENST00000462802 CEP162Q5TB80 1403 aa16.47■□□□□ 0.23
CUTA-205ENST00000462802 WDR97A6NE52 1622 aa16.47■□□□□ 0.23
CUTA-205ENST00000462802 IFT140Q96RY7 1462 aa16.47■□□□□ 0.23
CUTA-205ENST00000462802 CUX2O14529 1486 aa16.46■□□□□ 0.23
CUTA-205ENST00000462802 TARBP1Q13395 1621 aaKnown RBP16.45■□□□□ 0.22
CUTA-205ENST00000462802 RAD54L2Q9Y4B4 1467 aa16.44■□□□□ 0.22
CUTA-205ENST00000462802 ZEB1P37275 1124 aaPredicted RBP16.44■□□□□ 0.22
CUTA-205ENST00000462802 ERICH3Q5RHP9 1530 aa16.44■□□□□ 0.22
CUTA-205ENST00000462802 UBTFP17480 764 aaKnown RBP16.41■□□□□ 0.22
CUTA-205ENST00000462802 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
CUTA-205ENST00000462802 ABCA5Q8WWZ7 1642 aa16.38■□□□□ 0.21
CUTA-205ENST00000462802 IGF1RP08069 1367 aa16.33■□□□□ 0.2
CUTA-205ENST00000462802 GAPVD1Q14C86 1478 aa16.33■□□□□ 0.2
CUTA-205ENST00000462802 PRXQ9BXM0 1461 aa16.32■□□□□ 0.2
CUTA-205ENST00000462802 EHMT2Q96KQ7 1210 aa16.31■□□□□ 0.2
CUTA-205ENST00000462802 TDRD9Q8NDG6 1382 aaKnown RBP16.3■□□□□ 0.2
CUTA-205ENST00000462802 CLIP1P30622 1438 aa16.29■□□□□ 0.2
CUTA-205ENST00000462802 CUL7Q14999 1698 aa16.29■□□□□ 0.2
CUTA-205ENST00000462802 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
CUTA-205ENST00000462802 ZNF608Q9ULD9 1512 aaPredicted RBP16.26■□□□□ 0.19
CUTA-205ENST00000462802 PBRM1Q86U86 1689 aa16.26■□□□□ 0.19
CUTA-205ENST00000462802 EIF4G3O43432 1585 aaKnown RBP16.26■□□□□ 0.19
CUTA-205ENST00000462802 AQRO60306 1485 aaKnown RBP eCLIP16.25■□□□□ 0.193e-9■■■■■ 30.8
CUTA-205ENST00000462802 RAPGEF2Q9Y4G8 1499 aa16.25■□□□□ 0.19
CUTA-205ENST00000462802 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
CUTA-205ENST00000462802 VPS8Q8N3P4 1428 aa16.24■□□□□ 0.19
CUTA-205ENST00000462802 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
CUTA-205ENST00000462802 FHAD1B1AJZ9 1412 aa16.19■□□□□ 0.18
CUTA-205ENST00000462802 APLP2Q06481 763 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms