RNA–Protein interactions for RNA: ENST00000439754.6

PPT1-204, Transcript of palmitoyl-protein thioesterase 1, humanhuman

TSL 3 BASIC

Gene PPT1, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-204ENST00000439754 NISCHQ9Y2I1 1504 aa28.71■■■□□ 2.19
PPT1-204ENST00000439754 CCDC180Q9P1Z9 1646 aa24.67■■□□□ 1.54
PPT1-204ENST00000439754 ZCCHC6Q5VYS8 1495 aaKnown RBP24.3■■□□□ 1.48
PPT1-204ENST00000439754 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
PPT1-204ENST00000439754 DCAF1Q9Y4B6 1507 aa23.78■■□□□ 1.4
PPT1-204ENST00000439754 SUPT5HO00267 1087 aaKnown RBP23.35■■□□□ 1.33
PPT1-204ENST00000439754 DCAF8L2P0C7V8 631 aa23.34■■□□□ 1.33
PPT1-204ENST00000439754 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
PPT1-204ENST00000439754 ABCC9O60706 1549 aa22.89■■□□□ 1.26
PPT1-204ENST00000439754 CHIC1Q5VXU3 224 aa22.81■■□□□ 1.24
PPT1-204ENST00000439754 NACADO15069 1562 aa22.8■■□□□ 1.24
PPT1-204ENST00000439754 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
PPT1-204ENST00000439754 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
PPT1-204ENST00000439754 RB1CC1Q8TDY2 1594 aa22.4■■□□□ 1.18
PPT1-204ENST00000439754 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
PPT1-204ENST00000439754 MROH2BQ7Z745 1585 aa22.2■■□□□ 1.14
PPT1-204ENST00000439754 BAZ1AQ9NRL2 1556 aaPredicted RBP22.11■■□□□ 1.13
PPT1-204ENST00000439754 WIZO95785 1651 aa22.03■■□□□ 1.12
PPT1-204ENST00000439754 UNC13AQ9UPW8 1703 aa21.96■■□□□ 1.11
PPT1-204ENST00000439754 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
PPT1-204ENST00000439754 LOC105371045A0A1W2PR82 267 aa21.92■■□□□ 1.1
PPT1-204ENST00000439754 SMARCA4P51532 1647 aa21.9■■□□□ 1.1
PPT1-204ENST00000439754 TOP2AP11388 1531 aaKnown RBP21.86■■□□□ 1.09
PPT1-204ENST00000439754 EIF4G1Q04637 1599 aaKnown RBP21.85■■□□□ 1.09
PPT1-204ENST00000439754 HRCP23327 699 aa21.8■■□□□ 1.08
PPT1-204ENST00000439754 PCGF6Q9BYE7 350 aa21.75■■□□□ 1.07
PPT1-204ENST00000439754 BICRAQ9NZM4 1560 aa21.73■■□□□ 1.07
PPT1-204ENST00000439754 SMARCA2P51531 1590 aa21.67■■□□□ 1.06
PPT1-204ENST00000439754 PEG3Q9GZU2 1588 aa21.65■■□□□ 1.06
PPT1-204ENST00000439754 CCDC88BA6NC98 1476 aa21.63■■□□□ 1.05
PPT1-204ENST00000439754 TRIM26Q12899 539 aaPredicted RBP21.59■■□□□ 1.05
PPT1-204ENST00000439754 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
PPT1-204ENST00000439754 PABPN1Q86U42 306 aaKnown RBP eCLIP21.44■■□□□ 1.02
PPT1-204ENST00000439754 ABCC8Q09428 1581 aa21.42■■□□□ 1.02
PPT1-204ENST00000439754 ATAD2BQ9ULI0 1458 aa21.35■■□□□ 1.01
PPT1-204ENST00000439754 EEA1Q15075 1411 aa21.35■■□□□ 1.01
PPT1-204ENST00000439754 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
PPT1-204ENST00000439754 WRNQ14191 1432 aaPredicted RBP eCLIP21.22■□□□□ 0.99
PPT1-204ENST00000439754 SOGA1O94964 1423 aa21.18■□□□□ 0.98
PPT1-204ENST00000439754 TNIKQ9UKE5 1360 aa21.15■□□□□ 0.98
PPT1-204ENST00000439754 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.98
PPT1-204ENST00000439754 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
PPT1-204ENST00000439754 HMGXB3Q12766 1538 aa21.1■□□□□ 0.97
PPT1-204ENST00000439754 PPARGC1BQ86YN6 1023 aaKnown RBP21.1■□□□□ 0.97
PPT1-204ENST00000439754 CSRNP3Q8WYN3 585 aa21.09■□□□□ 0.97
PPT1-204ENST00000439754 SYNJ1O43426 1573 aa21.09■□□□□ 0.97
PPT1-204ENST00000439754 CEP162Q5TB80 1403 aa21.08■□□□□ 0.97
PPT1-204ENST00000439754 GOLGA3Q08378 1498 aa21.06■□□□□ 0.96
PPT1-204ENST00000439754 NCAPD3P42695 1498 aa21.05■□□□□ 0.96
PPT1-204ENST00000439754 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
PPT1-204ENST00000439754 KIF21BO75037 1637 aa21.01■□□□□ 0.95
PPT1-204ENST00000439754 CEP164Q9UPV0 1460 aa20.99■□□□□ 0.95
PPT1-204ENST00000439754 TOP2BQ02880 1626 aa20.96■□□□□ 0.95
PPT1-204ENST00000439754 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
PPT1-204ENST00000439754 UBTFP17480 764 aaKnown RBP20.86■□□□□ 0.93
PPT1-204ENST00000439754 CFTRP13569 1480 aa20.81■□□□□ 0.92
PPT1-204ENST00000439754 ERICH3Q5RHP9 1530 aa20.75■□□□□ 0.91
PPT1-204ENST00000439754 CLIP1P30622 1438 aa20.74■□□□□ 0.91
PPT1-204ENST00000439754 RAPGEF2Q9Y4G8 1499 aa20.74■□□□□ 0.91
PPT1-204ENST00000439754 CUX1P39880 1505 aa20.71■□□□□ 0.91
PPT1-204ENST00000439754 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
PPT1-204ENST00000439754 PRXQ9BXM0 1461 aa20.69■□□□□ 0.9
PPT1-204ENST00000439754 VPS8Q8N3P4 1428 aa20.69■□□□□ 0.9
PPT1-204ENST00000439754 KIF27Q86VH2 1401 aa20.61■□□□□ 0.89
PPT1-204ENST00000439754 CCER1Q8TC90 406 aaPredicted RBP20.58■□□□□ 0.88
PPT1-204ENST00000439754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
PPT1-204ENST00000439754 CADPSQ9ULU8 1353 aa20.55■□□□□ 0.88
PPT1-204ENST00000439754 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
PPT1-204ENST00000439754 TTBK1Q5TCY1 1321 aaPredicted RBP20.46■□□□□ 0.87
PPT1-204ENST00000439754 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
PPT1-204ENST00000439754 APLP2Q06481 763 aa20.44■□□□□ 0.86
PPT1-204ENST00000439754 CUX2O14529 1486 aa20.36■□□□□ 0.85
PPT1-204ENST00000439754 FGD5Q6ZNL6 1462 aa20.36■□□□□ 0.85
PPT1-204ENST00000439754 IGF1RP08069 1367 aa20.34■□□□□ 0.85
PPT1-204ENST00000439754 FANCD2Q9BXW9 1451 aa20.32■□□□□ 0.84
PPT1-204ENST00000439754 ARHGAP35Q9NRY4 1499 aa20.31■□□□□ 0.84
PPT1-204ENST00000439754 DNMBPQ6XZF7 1577 aa20.29■□□□□ 0.84
PPT1-204ENST00000439754 CARMIL1Q5VZK9 1371 aa20.24■□□□□ 0.83
PPT1-204ENST00000439754 RANGAP1P46060 587 aaPredicted RBP20.23■□□□□ 0.83
PPT1-204ENST00000439754 MAP3K1Q13233 1512 aa20.23■□□□□ 0.83
PPT1-204ENST00000439754 ABCA10Q8WWZ4 1543 aa20.23■□□□□ 0.83
PPT1-204ENST00000439754 RRBP1Q9P2E9 1410 aaKnown RBP20.22■□□□□ 0.83
PPT1-204ENST00000439754 LAMC3Q9Y6N6 1575 aa20.2■□□□□ 0.82
PPT1-204ENST00000439754 HNRNPUL2Q1KMD3 747 aaKnown RBP20.19■□□□□ 0.82
PPT1-204ENST00000439754 TOPBP1Q92547 1522 aa20.19■□□□□ 0.82
PPT1-204ENST00000439754 POLA1P09884 1462 aaPredicted RBP20.17■□□□□ 0.82
PPT1-204ENST00000439754 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
PPT1-204ENST00000439754 KANK4Q5T7N3 995 aaPredicted RBP20.14■□□□□ 0.81
PPT1-204ENST00000439754 CUL7Q14999 1698 aa20.13■□□□□ 0.81
PPT1-204ENST00000439754 TIAM1Q13009 1591 aa20.1■□□□□ 0.81
PPT1-204ENST00000439754 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
PPT1-204ENST00000439754 DIEXFQ68CQ4 756 aaKnown RBP20.1■□□□□ 0.81
PPT1-204ENST00000439754 NESP48681 1621 aa20.09■□□□□ 0.81
PPT1-204ENST00000439754 WDR97A6NE52 1622 aa20.07■□□□□ 0.8
PPT1-204ENST00000439754 EFCAB5A4FU69 1503 aa20.07■□□□□ 0.8
PPT1-204ENST00000439754 RAD54L2Q9Y4B4 1467 aa20.07■□□□□ 0.8
PPT1-204ENST00000439754 CCNB3Q8WWL7 1395 aa20.06■□□□□ 0.8
PPT1-204ENST00000439754 ZNF316A6NFI3 1004 aaPredicted RBP20.05■□□□□ 0.8
PPT1-204ENST00000439754 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
PPT1-204ENST00000439754 CFAP43Q8NDM7 1665 aa20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms