RNA–Protein interactions for RNA: ENST00000359013.4

TGFBR2-202, Transcript of transforming growth factor beta receptor 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TGFBR2, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR2-202ENST00000359013 DCAF8L2P0C7V8 631 aa25.73■■□□□ 1.71
TGFBR2-202ENST00000359013 SUPT5HO00267 1087 aaKnown RBP25.49■■□□□ 1.67
TGFBR2-202ENST00000359013 PELP1Q8IZL8 1130 aaKnown RBP25.17■■□□□ 1.62
TGFBR2-202ENST00000359013 NISCHQ9Y2I1 1504 aa25.08■■□□□ 1.61
TGFBR2-202ENST00000359013 PCGF6Q9BYE7 350 aa25■■□□□ 1.59
TGFBR2-202ENST00000359013 SHROOM4Q9ULL8 1493 aa24.77■■□□□ 1.56
TGFBR2-202ENST00000359013 MYT1Q01538 1121 aa24.74■■□□□ 1.55
TGFBR2-202ENST00000359013 EHMT2Q96KQ7 1210 aa24.6■■□□□ 1.53
TGFBR2-202ENST00000359013 CENPBP07199 599 aaPredicted RBP24.48■■□□□ 1.51
TGFBR2-202ENST00000359013 HRCP23327 699 aa24.3■■□□□ 1.48
TGFBR2-202ENST00000359013 ZEB1P37275 1124 aaPredicted RBP24.29■■□□□ 1.48
TGFBR2-202ENST00000359013 FAM9AQ8IZU1 332 aaPredicted RBP24.01■■□□□ 1.43
TGFBR2-202ENST00000359013 ERICH6Q7L0X2 663 aa23.98■■□□□ 1.43
TGFBR2-202ENST00000359013 CCER1Q8TC90 406 aaPredicted RBP23.96■■□□□ 1.43
TGFBR2-202ENST00000359013 TTBK1Q5TCY1 1321 aaPredicted RBP23.94■■□□□ 1.42
TGFBR2-202ENST00000359013 PPARGC1BQ86YN6 1023 aaKnown RBP23.94■■□□□ 1.42
TGFBR2-202ENST00000359013 YTHDC1Q96MU7 727 aaKnown RBP23.93■■□□□ 1.42
TGFBR2-202ENST00000359013 APLP2Q06481 763 aa23.67■■□□□ 1.38
TGFBR2-202ENST00000359013 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
TGFBR2-202ENST00000359013 NEFLP07196 543 aa23.45■■□□□ 1.34
TGFBR2-202ENST00000359013 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
TGFBR2-202ENST00000359013 LOC105371045A0A1W2PR82 267 aa23.28■■□□□ 1.32
TGFBR2-202ENST00000359013 GTF3C3Q9Y5Q9 886 aa23.25■■□□□ 1.31
TGFBR2-202ENST00000359013 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
TGFBR2-202ENST00000359013 DIEXFQ68CQ4 756 aaKnown RBP23.14■■□□□ 1.29
TGFBR2-202ENST00000359013 RANGAP1P46060 587 aaPredicted RBP23.13■■□□□ 1.29
TGFBR2-202ENST00000359013 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.97■■□□□ 1.27
TGFBR2-202ENST00000359013 UBTFP17480 764 aaKnown RBP22.94■■□□□ 1.26
TGFBR2-202ENST00000359013 ACIN1Q9UKV3 1341 aaKnown RBP22.94■■□□□ 1.26
TGFBR2-202ENST00000359013 SCAF1Q9H7N4 1312 aaKnown RBP22.71■■□□□ 1.23
TGFBR2-202ENST00000359013 HNRNPUL2Q1KMD3 747 aaKnown RBP22.67■■□□□ 1.22
TGFBR2-202ENST00000359013 BCANQ96GW7 911 aa22.67■■□□□ 1.22
TGFBR2-202ENST00000359013 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.21
TGFBR2-202ENST00000359013 DAXXQ9UER7 740 aaPredicted RBP22.57■■□□□ 1.2
TGFBR2-202ENST00000359013 ATP1B4Q9UN42 357 aaPredicted RBP22.56■■□□□ 1.2
TGFBR2-202ENST00000359013 NEUROD1Q13562 356 aa22.52■■□□□ 1.2
TGFBR2-202ENST00000359013 ITGAEP38570 1179 aa22.44■■□□□ 1.18
TGFBR2-202ENST00000359013 ZNF316A6NFI3 1004 aaPredicted RBP22.41■■□□□ 1.18
TGFBR2-202ENST00000359013 CDK11AQ9UQ88 783 aaPredicted RBP22.27■■□□□ 1.16
TGFBR2-202ENST00000359013 CNGB1Q14028 1251 aaPredicted RBP22.26■■□□□ 1.15
TGFBR2-202ENST00000359013 POLR3GLQ9BT43 218 aa22.19■■□□□ 1.14
TGFBR2-202ENST00000359013 EIF5BO60841 1220 aaKnown RBP22.08■■□□□ 1.13
TGFBR2-202ENST00000359013 FKBP8Q14318 412 aa22.03■■□□□ 1.12
TGFBR2-202ENST00000359013 CLSPNQ9HAW4 1339 aa22.01■■□□□ 1.11
TGFBR2-202ENST00000359013 ANP32CO43423 234 aa21.97■■□□□ 1.11
TGFBR2-202ENST00000359013 DCAF1Q9Y4B6 1507 aa21.94■■□□□ 1.1
TGFBR2-202ENST00000359013 ANP32EQ9BTT0 268 aa21.93■■□□□ 1.1
TGFBR2-202ENST00000359013 ANP32AP39687 249 aaKnown RBP21.87■■□□□ 1.09
TGFBR2-202ENST00000359013 MIER1Q8N108 512 aa21.84■■□□□ 1.09
TGFBR2-202ENST00000359013 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.09
TGFBR2-202ENST00000359013 BCL11AQ9H165 835 aa21.82■■□□□ 1.08
TGFBR2-202ENST00000359013 NBR1Q14596 966 aa21.79■■□□□ 1.08
TGFBR2-202ENST00000359013 NPM2Q86SE8 214 aaKnown RBP21.75■■□□□ 1.07
TGFBR2-202ENST00000359013 FAM50AQ14320 339 aaKnown RBP21.67■■□□□ 1.06
TGFBR2-202ENST00000359013 GLIPR1L2Q4G1C9 344 aa21.6■■□□□ 1.05
TGFBR2-202ENST00000359013 TRIM52Q96A61 297 aa21.6■■□□□ 1.05
TGFBR2-202ENST00000359013 MYO15BQ96JP2 1530 aa21.57■■□□□ 1.04
TGFBR2-202ENST00000359013 HNRNPUQ00839 825 aaKnown RBP eCLIP21.55■■□□□ 1.04
TGFBR2-202ENST00000359013 DDX10Q13206 875 aaKnown RBP21.55■■□□□ 1.04
TGFBR2-202ENST00000359013 ZBTB47Q9UFB7 747 aaPredicted RBP21.54■■□□□ 1.04
TGFBR2-202ENST00000359013 IRX6P78412 446 aaPredicted RBP21.47■■□□□ 1.03
TGFBR2-202ENST00000359013 SUPT16HQ9Y5B9 1047 aaKnown RBP21.41■■□□□ 1.02
TGFBR2-202ENST00000359013 CCDC136Q96JN2 1154 aa21.35■■□□□ 1.01
TGFBR2-202ENST00000359013 RTN4Q9NQC3 1192 aaKnown RBP21.35■■□□□ 1.01
TGFBR2-202ENST00000359013 ZNF326Q5BKZ1 582 aaKnown RBP21.34■■□□□ 1.01
TGFBR2-202ENST00000359013 CSRNP3Q8WYN3 585 aa21.33■■□□□ 1.01
TGFBR2-202ENST00000359013 FAM9BQ8IZU0 186 aa21.33■■□□□ 1
TGFBR2-202ENST00000359013 ARXQ96QS3 562 aa21.26■□□□□ 0.99
TGFBR2-202ENST00000359013 SLC4A1APQ9BWU0 796 aaKnown RBP21.25■□□□□ 0.99
TGFBR2-202ENST00000359013 CCDC180Q9P1Z9 1646 aa21.23■□□□□ 0.99
TGFBR2-202ENST00000359013 DEKP35659 375 aaKnown RBP21.18■□□□□ 0.98
TGFBR2-202ENST00000359013 RBM19Q9Y4C8 960 aaKnown RBP21.17■□□□□ 0.98
TGFBR2-202ENST00000359013 CANXP27824 592 aaKnown RBP21.17■□□□□ 0.98
TGFBR2-202ENST00000359013 HIRIP3Q9BW71 556 aaPredicted RBP21.17■□□□□ 0.98
TGFBR2-202ENST00000359013 ANP32BQ92688 251 aaKnown RBP21.14■□□□□ 0.97
TGFBR2-202ENST00000359013 TSHZ2Q9NRE2 1034 aa21.12■□□□□ 0.97
TGFBR2-202ENST00000359013 NEFMP07197 916 aa21.11■□□□□ 0.97
TGFBR2-202ENST00000359013 SALL2Q9Y467 1007 aaPredicted RBP21.1■□□□□ 0.97
TGFBR2-202ENST00000359013 ABCC9O60706 1549 aa21.1■□□□□ 0.97
TGFBR2-202ENST00000359013 TONSLQ96HA7 1378 aa21.09■□□□□ 0.97
TGFBR2-202ENST00000359013 MRS2Q9HD23 443 aa21.07■□□□□ 0.96
TGFBR2-202ENST00000359013 NOP58Q9Y2X3 529 aaKnown RBP21.06■□□□□ 0.96
TGFBR2-202ENST00000359013 LAS1LQ9Y4W2 734 aaKnown RBP21.01■□□□□ 0.95
TGFBR2-202ENST00000359013 UPF2Q9HAU5 1272 aaKnown RBP21■□□□□ 0.95
TGFBR2-202ENST00000359013 HSP90AA1P07900 732 aaKnown RBP20.99■□□□□ 0.95
TGFBR2-202ENST00000359013 ERICH6BQ5W0A0 696 aa20.97■□□□□ 0.95
TGFBR2-202ENST00000359013 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
TGFBR2-202ENST00000359013 P3H3Q8IVL6 736 aa20.95■□□□□ 0.94
TGFBR2-202ENST00000359013 TMC1Q8TDI8 760 aa20.93■□□□□ 0.94
TGFBR2-202ENST00000359013 PPM1GO15355 546 aaPredicted RBP20.93■□□□□ 0.94
TGFBR2-202ENST00000359013 ZCCHC6Q5VYS8 1495 aaKnown RBP20.93■□□□□ 0.94
TGFBR2-202ENST00000359013 PPP4R2Q9NY27 417 aa20.92■□□□□ 0.94
TGFBR2-202ENST00000359013 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.91■□□□□ 0.94
TGFBR2-202ENST00000359013 DDRGK1Q96HY6 314 aa20.9■□□□□ 0.94
TGFBR2-202ENST00000359013 B4GALNT3Q6L9W6 998 aa20.88■□□□□ 0.93
TGFBR2-202ENST00000359013 ARID3CA6NKF2 412 aa20.87■□□□□ 0.93
TGFBR2-202ENST00000359013 NAP1L5Q96NT1 182 aaPredicted RBP20.86■□□□□ 0.93
TGFBR2-202ENST00000359013 SENP3-EIF4A1A0A087X0R7 540 aa20.84■□□□□ 0.93
TGFBR2-202ENST00000359013 TRIM44Q96DX7 344 aaPredicted RBP20.82■□□□□ 0.92
TGFBR2-202ENST00000359013 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms