RNA–Protein interactions for RNA: ENST00000433473.8

PPT1-203, Transcript of palmitoyl-protein thioesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPT1, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-203ENST00000433473 NISCHQ9Y2I1 1504 aa31■■■□□ 2.55
PPT1-203ENST00000433473 CCDC180Q9P1Z9 1646 aa26.68■■□□□ 1.86
PPT1-203ENST00000433473 ZCCHC6Q5VYS8 1495 aaKnown RBP26.08■■□□□ 1.77
PPT1-203ENST00000433473 SHROOM4Q9ULL8 1493 aa25.99■■□□□ 1.75
PPT1-203ENST00000433473 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
PPT1-203ENST00000433473 DCAF1Q9Y4B6 1507 aa25.4■■□□□ 1.66
PPT1-203ENST00000433473 ABCC9O60706 1549 aa25.39■■□□□ 1.66
PPT1-203ENST00000433473 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
PPT1-203ENST00000433473 SCRIBQ14160 1630 aa24.95■■□□□ 1.59
PPT1-203ENST00000433473 MYO15BQ96JP2 1530 aa24.91■■□□□ 1.58
PPT1-203ENST00000433473 NACADO15069 1562 aa24.83■■□□□ 1.57
PPT1-203ENST00000433473 RB1CC1Q8TDY2 1594 aa24.6■■□□□ 1.53
PPT1-203ENST00000433473 CECR2Q9BXF3 1484 aa24.26■■□□□ 1.47
PPT1-203ENST00000433473 RSF1Q96T23 1441 aaPredicted RBP24.26■■□□□ 1.47
PPT1-203ENST00000433473 UNC13AQ9UPW8 1703 aa24.25■■□□□ 1.47
PPT1-203ENST00000433473 PABPN1Q86U42 306 aaKnown RBP eCLIP24.14■■□□□ 1.45
PPT1-203ENST00000433473 MROH2BQ7Z745 1585 aa24.1■■□□□ 1.45
PPT1-203ENST00000433473 CHIC1Q5VXU3 224 aa24.03■■□□□ 1.44
PPT1-203ENST00000433473 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
PPT1-203ENST00000433473 WIZO95785 1651 aa23.94■■□□□ 1.42
PPT1-203ENST00000433473 BAZ1AQ9NRL2 1556 aaPredicted RBP23.86■■□□□ 1.41
PPT1-203ENST00000433473 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
PPT1-203ENST00000433473 TOP2AP11388 1531 aaKnown RBP23.52■■□□□ 1.36
PPT1-203ENST00000433473 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
PPT1-203ENST00000433473 CCDC88BA6NC98 1476 aa23.41■■□□□ 1.34
PPT1-203ENST00000433473 SMARCA2P51531 1590 aa23.38■■□□□ 1.33
PPT1-203ENST00000433473 LOC105371045A0A1W2PR82 267 aa23.33■■□□□ 1.33
PPT1-203ENST00000433473 ATAD2BQ9ULI0 1458 aa23.33■■□□□ 1.32
PPT1-203ENST00000433473 PEG3Q9GZU2 1588 aa23.31■■□□□ 1.32
PPT1-203ENST00000433473 EIF4G1Q04637 1599 aaKnown RBP23.26■■□□□ 1.31
PPT1-203ENST00000433473 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
PPT1-203ENST00000433473 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
PPT1-203ENST00000433473 ABCC8Q09428 1581 aa23.16■■□□□ 1.3
PPT1-203ENST00000433473 EHMT2Q96KQ7 1210 aa23.13■■□□□ 1.29
PPT1-203ENST00000433473 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
PPT1-203ENST00000433473 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
PPT1-203ENST00000433473 CC2D2AQ9P2K1 1620 aa22.84■■□□□ 1.25
PPT1-203ENST00000433473 WRNQ14191 1432 aaPredicted RBP eCLIP22.82■■□□□ 1.24
PPT1-203ENST00000433473 SOGA1O94964 1423 aa22.79■■□□□ 1.24
PPT1-203ENST00000433473 SYNJ1O43426 1573 aa22.75■■□□□ 1.23
PPT1-203ENST00000433473 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
PPT1-203ENST00000433473 CFTRP13569 1480 aa22.6■■□□□ 1.21
PPT1-203ENST00000433473 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
PPT1-203ENST00000433473 CSRNP3Q8WYN3 585 aa22.55■■□□□ 1.2
PPT1-203ENST00000433473 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.2
PPT1-203ENST00000433473 TOP2BQ02880 1626 aa22.51■■□□□ 1.19
PPT1-203ENST00000433473 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
PPT1-203ENST00000433473 CUX1P39880 1505 aa22.48■■□□□ 1.19
PPT1-203ENST00000433473 EEA1Q15075 1411 aa22.45■■□□□ 1.19
PPT1-203ENST00000433473 BIVM-ERCC5R4GMW8 1640 aa22.43■■□□□ 1.18
PPT1-203ENST00000433473 UBTFP17480 764 aaKnown RBP22.43■■□□□ 1.18
PPT1-203ENST00000433473 NESP48681 1621 aa22.41■■□□□ 1.18
PPT1-203ENST00000433473 PRDM2Q13029 1718 aa22.39■■□□□ 1.17
PPT1-203ENST00000433473 PPARGC1BQ86YN6 1023 aaKnown RBP22.38■■□□□ 1.17
PPT1-203ENST00000433473 CEP162Q5TB80 1403 aa22.31■■□□□ 1.16
PPT1-203ENST00000433473 GOLGA3Q08378 1498 aa22.31■■□□□ 1.16
PPT1-203ENST00000433473 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
PPT1-203ENST00000433473 TNIKQ9UKE5 1360 aa22.29■■□□□ 1.16
PPT1-203ENST00000433473 TRIM26Q12899 539 aaPredicted RBP22.26■■□□□ 1.15
PPT1-203ENST00000433473 CEP164Q9UPV0 1460 aa22.26■■□□□ 1.15
PPT1-203ENST00000433473 RAPGEF2Q9Y4G8 1499 aa22.26■■□□□ 1.15
PPT1-203ENST00000433473 RANGAP1P46060 587 aaPredicted RBP22.26■■□□□ 1.15
PPT1-203ENST00000433473 KIF21BO75037 1637 aa22.22■■□□□ 1.15
PPT1-203ENST00000433473 FGD5Q6ZNL6 1462 aa22.19■■□□□ 1.14
PPT1-203ENST00000433473 TTBK1Q5TCY1 1321 aaPredicted RBP22.18■■□□□ 1.14
PPT1-203ENST00000433473 KIF27Q86VH2 1401 aa22.16■■□□□ 1.14
PPT1-203ENST00000433473 CUX2O14529 1486 aa22.13■■□□□ 1.13
PPT1-203ENST00000433473 LAMC3Q9Y6N6 1575 aa22.12■■□□□ 1.13
PPT1-203ENST00000433473 PRXQ9BXM0 1461 aa22.08■■□□□ 1.12
PPT1-203ENST00000433473 TOPBP1Q92547 1522 aa22.07■■□□□ 1.12
PPT1-203ENST00000433473 RAD54L2Q9Y4B4 1467 aa22.07■■□□□ 1.12
PPT1-203ENST00000433473 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
PPT1-203ENST00000433473 CLIP1P30622 1438 aa22.05■■□□□ 1.12
PPT1-203ENST00000433473 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
PPT1-203ENST00000433473 POLA1P09884 1462 aaPredicted RBP22.02■■□□□ 1.12
PPT1-203ENST00000433473 HRCP23327 699 aa22.01■■□□□ 1.11
PPT1-203ENST00000433473 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
PPT1-203ENST00000433473 PDS5BQ9NTI5 1447 aa22■■□□□ 1.11
PPT1-203ENST00000433473 IGF1RP08069 1367 aa21.99■■□□□ 1.11
PPT1-203ENST00000433473 ERICH3Q5RHP9 1530 aa21.99■■□□□ 1.11
PPT1-203ENST00000433473 CARMIL1Q5VZK9 1371 aa21.89■■□□□ 1.1
PPT1-203ENST00000433473 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
PPT1-203ENST00000433473 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
PPT1-203ENST00000433473 VPS8Q8N3P4 1428 aa21.84■■□□□ 1.09
PPT1-203ENST00000433473 ARAP1Q96P48 1450 aa21.79■■□□□ 1.08
PPT1-203ENST00000433473 WDR97A6NE52 1622 aa21.76■■□□□ 1.07
PPT1-203ENST00000433473 APLP2Q06481 763 aa21.73■■□□□ 1.07
PPT1-203ENST00000433473 ARHGAP35Q9NRY4 1499 aa21.72■■□□□ 1.07
PPT1-203ENST00000433473 MRC2Q9UBG0 1479 aa21.72■■□□□ 1.07
PPT1-203ENST00000433473 GAPVD1Q14C86 1478 aa21.7■■□□□ 1.06
PPT1-203ENST00000433473 P3H3Q8IVL6 736 aa21.68■■□□□ 1.06
PPT1-203ENST00000433473 ABCA5Q8WWZ7 1642 aa21.68■■□□□ 1.06
PPT1-203ENST00000433473 TARBP1Q13395 1621 aaKnown RBP21.68■■□□□ 1.06
PPT1-203ENST00000433473 ERCC6Q03468 1493 aa21.66■■□□□ 1.06
PPT1-203ENST00000433473 AQRO60306 1485 aaKnown RBP eCLIP21.65■■□□□ 1.06
PPT1-203ENST00000433473 CUL7Q14999 1698 aa21.63■■□□□ 1.05
PPT1-203ENST00000433473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.6■■□□□ 1.05
PPT1-203ENST00000433473 KANK4Q5T7N3 995 aaPredicted RBP21.6■■□□□ 1.05
PPT1-203ENST00000433473 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
PPT1-203ENST00000433473 WDR62O43379 1518 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms