RNA–Protein interactions for RNA: ENST00000530076.6

PPT1-209, Transcript of palmitoyl-protein thioesterase 1, humanhuman

TSL 2 BASIC

Gene PPT1, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-209ENST00000530076 NISCHQ9Y2I1 1504 aa23.14■■□□□ 1.29
PPT1-209ENST00000530076 CCDC180Q9P1Z9 1646 aa20.27■□□□□ 0.84
PPT1-209ENST00000530076 ZCCHC6Q5VYS8 1495 aaKnown RBP19.46■□□□□ 0.71
PPT1-209ENST00000530076 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
PPT1-209ENST00000530076 ABCC9O60706 1549 aa19.12■□□□□ 0.65
PPT1-209ENST00000530076 DCAF8L2P0C7V8 631 aa18.98■□□□□ 0.63
PPT1-209ENST00000530076 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
PPT1-209ENST00000530076 NACADO15069 1562 aa18.84■□□□□ 0.61
PPT1-209ENST00000530076 SHROOM4Q9ULL8 1493 aa18.78■□□□□ 0.6
PPT1-209ENST00000530076 RB1CC1Q8TDY2 1594 aa18.69■□□□□ 0.58
PPT1-209ENST00000530076 SCRIBQ14160 1630 aa18.6■□□□□ 0.57
PPT1-209ENST00000530076 UNC13AQ9UPW8 1703 aa18.39■□□□□ 0.53
PPT1-209ENST00000530076 BICRAQ9NZM4 1560 aa18.15■□□□□ 0.5
PPT1-209ENST00000530076 SUPT5HO00267 1087 aaKnown RBP17.99■□□□□ 0.47
PPT1-209ENST00000530076 CECR2Q9BXF3 1484 aa17.96■□□□□ 0.47
PPT1-209ENST00000530076 PABPN1Q86U42 306 aaKnown RBP eCLIP17.96■□□□□ 0.47
PPT1-209ENST00000530076 RSF1Q96T23 1441 aaPredicted RBP17.91■□□□□ 0.46
PPT1-209ENST00000530076 BAZ1AQ9NRL2 1556 aaPredicted RBP17.88■□□□□ 0.45
PPT1-209ENST00000530076 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
PPT1-209ENST00000530076 SMARCA4P51532 1647 aa17.83■□□□□ 0.44
PPT1-209ENST00000530076 WIZO95785 1651 aa17.75■□□□□ 0.43
PPT1-209ENST00000530076 PEG3Q9GZU2 1588 aa17.62■□□□□ 0.41
PPT1-209ENST00000530076 EIF4G1Q04637 1599 aaKnown RBP17.59■□□□□ 0.41
PPT1-209ENST00000530076 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
PPT1-209ENST00000530076 SMARCA2P51531 1590 aa17.51■□□□□ 0.39
PPT1-209ENST00000530076 ATAD2BQ9ULI0 1458 aa17.5■□□□□ 0.39
PPT1-209ENST00000530076 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
PPT1-209ENST00000530076 HMGXB3Q12766 1538 aa17.38■□□□□ 0.37
PPT1-209ENST00000530076 NCAPD3P42695 1498 aa17.35■□□□□ 0.37
PPT1-209ENST00000530076 CCDC88BA6NC98 1476 aa17.35■□□□□ 0.37
PPT1-209ENST00000530076 CC2D2AQ9P2K1 1620 aa17.34■□□□□ 0.37
PPT1-209ENST00000530076 CHIC1Q5VXU3 224 aa17.22■□□□□ 0.35
PPT1-209ENST00000530076 ABCC8Q09428 1581 aa16.99■□□□□ 0.31
PPT1-209ENST00000530076 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
PPT1-209ENST00000530076 CFTRP13569 1480 aa16.96■□□□□ 0.31
PPT1-209ENST00000530076 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
PPT1-209ENST00000530076 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
PPT1-209ENST00000530076 WRNQ14191 1432 aaPredicted RBP eCLIP16.85■□□□□ 0.29
PPT1-209ENST00000530076 SYNJ1O43426 1573 aa16.84■□□□□ 0.29
PPT1-209ENST00000530076 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
PPT1-209ENST00000530076 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
PPT1-209ENST00000530076 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
PPT1-209ENST00000530076 NESP48681 1621 aa16.78■□□□□ 0.28
PPT1-209ENST00000530076 TOP2BQ02880 1626 aa16.77■□□□□ 0.28
PPT1-209ENST00000530076 CUX1P39880 1505 aa16.73■□□□□ 0.27
PPT1-209ENST00000530076 FANCD2Q9BXW9 1451 aa16.73■□□□□ 0.27
PPT1-209ENST00000530076 KIF21AQ7Z4S6 1674 aa16.65■□□□□ 0.26
PPT1-209ENST00000530076 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
PPT1-209ENST00000530076 SOGA1O94964 1423 aa16.62■□□□□ 0.25
PPT1-209ENST00000530076 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
PPT1-209ENST00000530076 DNMBPQ6XZF7 1577 aa16.61■□□□□ 0.25
PPT1-209ENST00000530076 FAM9AQ8IZU1 332 aaPredicted RBP16.61■□□□□ 0.25
PPT1-209ENST00000530076 EEA1Q15075 1411 aa16.59■□□□□ 0.25
PPT1-209ENST00000530076 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
PPT1-209ENST00000530076 TOPBP1Q92547 1522 aa16.56■□□□□ 0.24
PPT1-209ENST00000530076 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
PPT1-209ENST00000530076 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
PPT1-209ENST00000530076 LOC105371045A0A1W2PR82 267 aa16.54■□□□□ 0.24
PPT1-209ENST00000530076 POLA1P09884 1462 aaPredicted RBP16.46■□□□□ 0.23
PPT1-209ENST00000530076 MRC2Q9UBG0 1479 aa16.46■□□□□ 0.23
PPT1-209ENST00000530076 KIF21BO75037 1637 aa16.44■□□□□ 0.22
PPT1-209ENST00000530076 CSRNP3Q8WYN3 585 aa16.44■□□□□ 0.22
PPT1-209ENST00000530076 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
PPT1-209ENST00000530076 KIF27Q86VH2 1401 aa16.42■□□□□ 0.22
PPT1-209ENST00000530076 CUX2O14529 1486 aa16.41■□□□□ 0.22
PPT1-209ENST00000530076 WDR62O43379 1518 aa16.4■□□□□ 0.22
PPT1-209ENST00000530076 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
PPT1-209ENST00000530076 RAD54L2Q9Y4B4 1467 aa16.39■□□□□ 0.21
PPT1-209ENST00000530076 ERCC6Q03468 1493 aa16.39■□□□□ 0.21
PPT1-209ENST00000530076 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
PPT1-209ENST00000530076 GOLGA3Q08378 1498 aa16.37■□□□□ 0.21
PPT1-209ENST00000530076 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
PPT1-209ENST00000530076 TARBP1Q13395 1621 aaKnown RBP16.34■□□□□ 0.21
PPT1-209ENST00000530076 PRXQ9BXM0 1461 aa16.32■□□□□ 0.2
PPT1-209ENST00000530076 ERICH3Q5RHP9 1530 aa16.32■□□□□ 0.2
PPT1-209ENST00000530076 ABCA5Q8WWZ7 1642 aa16.32■□□□□ 0.2
PPT1-209ENST00000530076 RAPGEF2Q9Y4G8 1499 aa16.3■□□□□ 0.2
PPT1-209ENST00000530076 TNIKQ9UKE5 1360 aa16.28■□□□□ 0.2
PPT1-209ENST00000530076 IGF1RP08069 1367 aa16.26■□□□□ 0.19
PPT1-209ENST00000530076 CUL7Q14999 1698 aa16.24■□□□□ 0.19
PPT1-209ENST00000530076 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
PPT1-209ENST00000530076 PBRM1Q86U86 1689 aa16.22■□□□□ 0.19
PPT1-209ENST00000530076 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
PPT1-209ENST00000530076 CEP162Q5TB80 1403 aa16.21■□□□□ 0.19
PPT1-209ENST00000530076 UBTFP17480 764 aaKnown RBP16.2■□□□□ 0.18
PPT1-209ENST00000530076 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
PPT1-209ENST00000530076 CARMIL1Q5VZK9 1371 aa16.18■□□□□ 0.18
PPT1-209ENST00000530076 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
PPT1-209ENST00000530076 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
PPT1-209ENST00000530076 AQRO60306 1485 aaKnown RBP eCLIP16.12■□□□□ 0.17
PPT1-209ENST00000530076 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
PPT1-209ENST00000530076 GRIN2BQ13224 1484 aa16.1■□□□□ 0.17
PPT1-209ENST00000530076 CLIP1P30622 1438 aa16.08■□□□□ 0.16
PPT1-209ENST00000530076 CTTNBP2Q8WZ74 1663 aa16.08■□□□□ 0.16
PPT1-209ENST00000530076 FHAD1B1AJZ9 1412 aa16.04■□□□□ 0.16
PPT1-209ENST00000530076 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.15
PPT1-209ENST00000530076 MAGI1Q96QZ7 1491 aaPredicted RBP15.98■□□□□ 0.15
PPT1-209ENST00000530076 ARAP1Q96P48 1450 aa15.98■□□□□ 0.15
PPT1-209ENST00000530076 ARHGAP35Q9NRY4 1499 aa15.96■□□□□ 0.15
PPT1-209ENST00000530076 VPS8Q8N3P4 1428 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms