RNA–Protein interactions for RNA: ENST00000486261.5

KRIT1-222, Transcript of KRIT1, ankyrin repeat containing, humanhuman

TSL 1 (best)

Gene KRIT1, Length 4,057 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-222ENST00000486261 NISCHQ9Y2I1 1504 aa10.65□□□□□ -0.71
KRIT1-222ENST00000486261 ABCC9O60706 1549 aa9.5□□□□□ -0.89
KRIT1-222ENST00000486261 CCDC180Q9P1Z9 1646 aa9.47□□□□□ -0.89
KRIT1-222ENST00000486261 DCAF8L2P0C7V8 631 aa9.41□□□□□ -0.9
KRIT1-222ENST00000486261 RB1CC1Q8TDY2 1594 aa9.14□□□□□ -0.95
KRIT1-222ENST00000486261 NACADO15069 1562 aa9.08□□□□□ -0.96
KRIT1-222ENST00000486261 SLC24A1O60721 1099 aa9□□□□□ -0.97
KRIT1-222ENST00000486261 MYO15BQ96JP2 1530 aa8.94□□□□□ -0.98
KRIT1-222ENST00000486261 PABPN1Q86U42 306 aaKnown RBP eCLIP8.92□□□□□ -0.98
KRIT1-222ENST00000486261 EHMT2Q96KQ7 1210 aa8.84□□□□□ -0.99
KRIT1-222ENST00000486261 DCAF1Q9Y4B6 1507 aa8.83□□□□□ -1
KRIT1-222ENST00000486261 SHROOM4Q9ULL8 1493 aa8.81□□□□□ -1
KRIT1-222ENST00000486261 ZCCHC6Q5VYS8 1495 aaKnown RBP8.79□□□□□ -1
KRIT1-222ENST00000486261 SCRIBQ14160 1630 aa8.68□□□□□ -1.02
KRIT1-222ENST00000486261 DNAJC5BQ9UF47 199 aa8.61□□□□□ -1.03
KRIT1-222ENST00000486261 CECR2Q9BXF3 1484 aa8.6□□□□□ -1.03
KRIT1-222ENST00000486261 BICRAQ9NZM4 1560 aa8.5□□□□□ -1.05
KRIT1-222ENST00000486261 EIF4G1Q04637 1599 aaKnown RBP8.48□□□□□ -1.05
KRIT1-222ENST00000486261 CC2D2AQ9P2K1 1620 aa8.45□□□□□ -1.06
KRIT1-222ENST00000486261 ERCC6Q03468 1493 aa8.42□□□□□ -1.06
KRIT1-222ENST00000486261 SMARCA2P51531 1590 aa8.41□□□□□ -1.06
KRIT1-222ENST00000486261 UNC13AQ9UPW8 1703 aa8.41□□□□□ -1.06
KRIT1-222ENST00000486261 BAZ1AQ9NRL2 1556 aaPredicted RBP8.37□□□□□ -1.07
KRIT1-222ENST00000486261 NCAPD3P42695 1498 aa8.36□□□□□ -1.07
KRIT1-222ENST00000486261 BAZ1BQ9UIG0 1483 aaKnown RBP8.36□□□□□ -1.07
KRIT1-222ENST00000486261 PDS5BQ9NTI5 1447 aa8.32□□□□□ -1.08
KRIT1-222ENST00000486261 CHIC1Q5VXU3 224 aa8.32□□□□□ -1.08
KRIT1-222ENST00000486261 ATAD2BQ9ULI0 1458 aa8.3□□□□□ -1.08
KRIT1-222ENST00000486261 PLPPR3Q6T4P5 718 aa8.26□□□□□ -1.09
KRIT1-222ENST00000486261 HMGXB3Q12766 1538 aa8.26□□□□□ -1.09
KRIT1-222ENST00000486261 CUX2O14529 1486 aa8.25□□□□□ -1.09
KRIT1-222ENST00000486261 SMARCA4P51532 1647 aa8.23□□□□□ -1.09
KRIT1-222ENST00000486261 CADPSQ9ULU8 1353 aa8.2□□□□□ -1.1
KRIT1-222ENST00000486261 RTN4Q9NQC3 1192 aaKnown RBP8.17□□□□□ -1.1
KRIT1-222ENST00000486261 DNAJC5Q9H3Z4 198 aa8.15□□□□□ -1.1
KRIT1-222ENST00000486261 LAMC3Q9Y6N6 1575 aa8.15□□□□□ -1.11
KRIT1-222ENST00000486261 FAM9AQ8IZU1 332 aaPredicted RBP8.13□□□□□ -1.11
KRIT1-222ENST00000486261 MYT1Q01538 1121 aa8.12□□□□□ -1.11
KRIT1-222ENST00000486261 CEP164Q9UPV0 1460 aa8.12□□□□□ -1.11
KRIT1-222ENST00000486261 MROH2BQ7Z745 1585 aa8.11□□□□□ -1.11
KRIT1-222ENST00000486261 SUPT5HO00267 1087 aaKnown RBP8.1□□□□□ -1.11
KRIT1-222ENST00000486261 PEG3Q9GZU2 1588 aa8.1□□□□□ -1.11
KRIT1-222ENST00000486261 ABCC8Q09428 1581 aa8.09□□□□□ -1.11
KRIT1-222ENST00000486261 MRC2Q9UBG0 1479 aa8.09□□□□□ -1.11
KRIT1-222ENST00000486261 OSCARQ8IYS5 282 aa8.08□□□□□ -1.12
KRIT1-222ENST00000486261 RSF1Q96T23 1441 aaPredicted RBP8.08□□□□□ -1.12
KRIT1-222ENST00000486261 FANCD2Q9BXW9 1451 aa8.05□□□□□ -1.12
KRIT1-222ENST00000486261 TOP2AP11388 1531 aaKnown RBP8.04□□□□□ -1.12
KRIT1-222ENST00000486261 DAXXQ9UER7 740 aaPredicted RBP8.03□□□□□ -1.12
KRIT1-222ENST00000486261 FBLN2P98095 1184 aa8.03□□□□□ -1.12
KRIT1-222ENST00000486261 NESP48681 1621 aa8.02□□□□□ -1.13
KRIT1-222ENST00000486261 PRKCSHP14314 528 aaPredicted RBP8.01□□□□□ -1.13
KRIT1-222ENST00000486261 CFTRP13569 1480 aa8□□□□□ -1.13
KRIT1-222ENST00000486261 PELP1Q8IZL8 1130 aaKnown RBP7.99□□□□□ -1.13
KRIT1-222ENST00000486261 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
KRIT1-222ENST00000486261 TRIM41Q8WV44 630 aa7.99□□□□□ -1.13
KRIT1-222ENST00000486261 CHMP7Q8WUX9 453 aaPredicted RBP7.98□□□□□ -1.13
KRIT1-222ENST00000486261 IFT140Q96RY7 1462 aa7.96□□□□□ -1.13
KRIT1-222ENST00000486261 WIZO95785 1651 aa7.95□□□□□ -1.14
KRIT1-222ENST00000486261 RANGAP1P46060 587 aaPredicted RBP7.94□□□□□ -1.14
KRIT1-222ENST00000486261 NPM1P06748 294 aaKnown RBP eCLIP7.92□□□□□ -1.14
KRIT1-222ENST00000486261 CCDC88BA6NC98 1476 aa7.92□□□□□ -1.14
KRIT1-222ENST00000486261 WDR62O43379 1518 aa7.9□□□□□ -1.14
KRIT1-222ENST00000486261 SOGA1O94964 1423 aa7.89□□□□□ -1.15
KRIT1-222ENST00000486261 TRHP20396 242 aaPredicted RBP7.88□□□□□ -1.15
KRIT1-222ENST00000486261 TTBK1Q5TCY1 1321 aaPredicted RBP7.86□□□□□ -1.15
KRIT1-222ENST00000486261 AEBP2Q6ZN18 517 aaPredicted RBP7.86□□□□□ -1.15
KRIT1-222ENST00000486261 THOC2Q8NI27 1593 aaKnown RBP7.85□□□□□ -1.15
KRIT1-222ENST00000486261 WRNQ14191 1432 aaPredicted RBP eCLIP7.85□□□□□ -1.15
KRIT1-222ENST00000486261 TOPBP1Q92547 1522 aa7.84□□□□□ -1.15
KRIT1-222ENST00000486261 DNMBPQ6XZF7 1577 aa7.83□□□□□ -1.16
KRIT1-222ENST00000486261 AMER1Q5JTC6 1135 aaPredicted RBP7.83□□□□□ -1.16
KRIT1-222ENST00000486261 NCBP3Q53F19 620 aaKnown RBP7.83□□□□□ -1.16
KRIT1-222ENST00000486261 KIF21AQ7Z4S6 1674 aa7.82□□□□□ -1.16
KRIT1-222ENST00000486261 CYB5RLQ6IPT4 315 aa7.82□□□□□ -1.16
KRIT1-222ENST00000486261 URB2Q14146 1524 aaKnown RBP7.8□□□□□ -1.16
KRIT1-222ENST00000486261 GRIN2BQ13224 1484 aa7.8□□□□□ -1.16
KRIT1-222ENST00000486261 TDRD9Q8NDG6 1382 aaKnown RBP7.8□□□□□ -1.16
KRIT1-222ENST00000486261 KCNA4P22459 653 aa7.77□□□□□ -1.17
KRIT1-222ENST00000486261 MAGI1Q96QZ7 1491 aaPredicted RBP7.76□□□□□ -1.17
KRIT1-222ENST00000486261 TULP1O00294 542 aaPredicted RBP7.76□□□□□ -1.17
KRIT1-222ENST00000486261 WDR97A6NE52 1622 aa7.76□□□□□ -1.17
KRIT1-222ENST00000486261 GAPVD1Q14C86 1478 aa7.75□□□□□ -1.17
KRIT1-222ENST00000486261 FGD5Q6ZNL6 1462 aa7.75□□□□□ -1.17
KRIT1-222ENST00000486261 AQRO60306 1485 aaKnown RBP eCLIP7.75□□□□□ -1.172e-6■□□□□ 8.5
KRIT1-222ENST00000486261 POLA1P09884 1462 aaPredicted RBP7.74□□□□□ -1.17
KRIT1-222ENST00000486261 KIF27Q86VH2 1401 aa7.74□□□□□ -1.17
KRIT1-222ENST00000486261 SYNJ1O43426 1573 aa7.74□□□□□ -1.17
KRIT1-222ENST00000486261 SYNJ2O15056 1496 aa7.71□□□□□ -1.17
KRIT1-222ENST00000486261 PRDM2Q13029 1718 aa7.71□□□□□ -1.18
KRIT1-222ENST00000486261 CARMIL2Q6F5E8 1435 aa7.71□□□□□ -1.18
KRIT1-222ENST00000486261 FHAD1B1AJZ9 1412 aa7.7□□□□□ -1.18
KRIT1-222ENST00000486261 SNAPC4Q5SXM2 1469 aa7.7□□□□□ -1.18
KRIT1-222ENST00000486261 RAD54L2Q9Y4B4 1467 aa7.7□□□□□ -1.18
KRIT1-222ENST00000486261 ZNF608Q9ULD9 1512 aaPredicted RBP7.69□□□□□ -1.18
KRIT1-222ENST00000486261 JPH4Q96JJ6 628 aa7.68□□□□□ -1.18
KRIT1-222ENST00000486261 ABCA10Q8WWZ4 1543 aa7.67□□□□□ -1.18
KRIT1-222ENST00000486261 TIMELESSQ9UNS1 1208 aa7.66□□□□□ -1.18
KRIT1-222ENST00000486261 CSRNP3Q8WYN3 585 aa7.65□□□□□ -1.18
KRIT1-222ENST00000486261 EIF4G3O43432 1585 aaKnown RBP7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms