RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 NISCHQ9Y2I1 1504 aa33.95■■■■□ 3.02
CNBP-201ENST00000422453 CCDC180Q9P1Z9 1646 aa30.23■■■□□ 2.43
CNBP-201ENST00000422453 ABCC9O60706 1549 aa29.82■■■□□ 2.36
CNBP-201ENST00000422453 DCAF8L2P0C7V8 631 aa28.61■■■□□ 2.17
CNBP-201ENST00000422453 RB1CC1Q8TDY2 1594 aa28.59■■■□□ 2.17
CNBP-201ENST00000422453 NACADO15069 1562 aa28.51■■■□□ 2.15
CNBP-201ENST00000422453 MYO15BQ96JP2 1530 aa28.24■■■□□ 2.11
CNBP-201ENST00000422453 ZCCHC6Q5VYS8 1495 aaKnown RBP28.21■■■□□ 2.11
CNBP-201ENST00000422453 DCAF1Q9Y4B6 1507 aa28.05■■■□□ 2.08
CNBP-201ENST00000422453 PABPN1Q86U42 306 aaKnown RBP eCLIP27.88■■■□□ 2.05
CNBP-201ENST00000422453 UNC13AQ9UPW8 1703 aa27.86■■■□□ 2.05
CNBP-201ENST00000422453 BICRAQ9NZM4 1560 aa27.66■■■□□ 2.02
CNBP-201ENST00000422453 SCRIBQ14160 1630 aa27.62■■■□□ 2.01
CNBP-201ENST00000422453 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
CNBP-201ENST00000422453 SHROOM4Q9ULL8 1493 aa27.39■■□□□ 1.98
CNBP-201ENST00000422453 EIF4G1Q04637 1599 aaKnown RBP26.99■■□□□ 1.91
CNBP-201ENST00000422453 CC2D2AQ9P2K1 1620 aa26.94■■□□□ 1.9
CNBP-201ENST00000422453 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
CNBP-201ENST00000422453 SMARCA4P51532 1647 aa26.37■■□□□ 1.81
CNBP-201ENST00000422453 BAZ1AQ9NRL2 1556 aaPredicted RBP26.34■■□□□ 1.81
CNBP-201ENST00000422453 NCAPD3P42695 1498 aa26.3■■□□□ 1.8
CNBP-201ENST00000422453 ATAD2BQ9ULI0 1458 aa26.29■■□□□ 1.8
CNBP-201ENST00000422453 SMARCA2P51531 1590 aa26.26■■□□□ 1.79
CNBP-201ENST00000422453 MROH2BQ7Z745 1585 aa26.15■■□□□ 1.78
CNBP-201ENST00000422453 HMGXB3Q12766 1538 aa26.14■■□□□ 1.77
CNBP-201ENST00000422453 BAZ1BQ9UIG0 1483 aaKnown RBP26.1■■□□□ 1.77
CNBP-201ENST00000422453 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
CNBP-201ENST00000422453 WIZO95785 1651 aa25.87■■□□□ 1.73
CNBP-201ENST00000422453 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
CNBP-201ENST00000422453 ERCC6Q03468 1493 aa25.77■■□□□ 1.72
CNBP-201ENST00000422453 NESP48681 1621 aa25.72■■□□□ 1.71
CNBP-201ENST00000422453 LAMC3Q9Y6N6 1575 aa25.64■■□□□ 1.7
CNBP-201ENST00000422453 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.69
CNBP-201ENST00000422453 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
CNBP-201ENST00000422453 PDS5BQ9NTI5 1447 aa25.53■■□□□ 1.68
CNBP-201ENST00000422453 CUX2O14529 1486 aa25.5■■□□□ 1.67
CNBP-201ENST00000422453 KIF21AQ7Z4S6 1674 aa25.39■■□□□ 1.66
CNBP-201ENST00000422453 CFTRP13569 1480 aa25.34■■□□□ 1.65
CNBP-201ENST00000422453 THOC2Q8NI27 1593 aaKnown RBP25.33■■□□□ 1.65
CNBP-201ENST00000422453 CCDC88BA6NC98 1476 aa25.31■■□□□ 1.64
CNBP-201ENST00000422453 FANCD2Q9BXW9 1451 aa25.26■■□□□ 1.63
CNBP-201ENST00000422453 CEP164Q9UPV0 1460 aa25.25■■□□□ 1.63
CNBP-201ENST00000422453 MRC2Q9UBG0 1479 aa25.23■■□□□ 1.63
CNBP-201ENST00000422453 SUPT5HO00267 1087 aaKnown RBP25.14■■□□□ 1.62
CNBP-201ENST00000422453 WDR62O43379 1518 aa25.13■■□□□ 1.61
CNBP-201ENST00000422453 PRDM2Q13029 1718 aa25.08■■□□□ 1.61
CNBP-201ENST00000422453 URB2Q14146 1524 aaKnown RBP24.98■■□□□ 1.59
CNBP-201ENST00000422453 DNAJC5Q9H3Z4 198 aa24.97■■□□□ 1.59
CNBP-201ENST00000422453 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
CNBP-201ENST00000422453 TOPBP1Q92547 1522 aa24.82■■□□□ 1.56
CNBP-201ENST00000422453 DNMBPQ6XZF7 1577 aa24.77■■□□□ 1.56
CNBP-201ENST00000422453 IFT140Q96RY7 1462 aa24.73■■□□□ 1.55
CNBP-201ENST00000422453 ZNF608Q9ULD9 1512 aaPredicted RBP24.6■■□□□ 1.53
CNBP-201ENST00000422453 POLA1P09884 1462 aaPredicted RBP24.6■■□□□ 1.53
CNBP-201ENST00000422453 CUX1P39880 1505 aa24.54■■□□□ 1.52
CNBP-201ENST00000422453 SOGA1O94964 1423 aa24.54■■□□□ 1.52
CNBP-201ENST00000422453 TARBP1Q13395 1621 aaKnown RBP24.52■■□□□ 1.52
CNBP-201ENST00000422453 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
CNBP-201ENST00000422453 RAD54L2Q9Y4B4 1467 aa24.5■■□□□ 1.51
CNBP-201ENST00000422453 EIF4G3O43432 1585 aaKnown RBP24.49■■□□□ 1.51
CNBP-201ENST00000422453 OSCARQ8IYS5 282 aa24.49■■□□□ 1.51
CNBP-201ENST00000422453 AQRO60306 1485 aaKnown RBP eCLIP24.48■■□□□ 1.513e-6■■■□□ 18.6
CNBP-201ENST00000422453 TDRD9Q8NDG6 1382 aaKnown RBP24.42■■□□□ 1.5
CNBP-201ENST00000422453 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
CNBP-201ENST00000422453 WDR97A6NE52 1622 aa24.34■■□□□ 1.49
CNBP-201ENST00000422453 FBLN2P98095 1184 aa24.32■■□□□ 1.48
CNBP-201ENST00000422453 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
CNBP-201ENST00000422453 BIVM-ERCC5R4GMW8 1640 aa24.27■■□□□ 1.48
CNBP-201ENST00000422453 SYNJ1O43426 1573 aa24.26■■□□□ 1.47
CNBP-201ENST00000422453 ABCA10Q8WWZ4 1543 aa24.26■■□□□ 1.47
CNBP-201ENST00000422453 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
CNBP-201ENST00000422453 GAPVD1Q14C86 1478 aa24.23■■□□□ 1.47
CNBP-201ENST00000422453 SNAPC4Q5SXM2 1469 aa24.23■■□□□ 1.47
CNBP-201ENST00000422453 CHMP7Q8WUX9 453 aaPredicted RBP24.21■■□□□ 1.47
CNBP-201ENST00000422453 CHD1O14646 1710 aa24.2■■□□□ 1.47
CNBP-201ENST00000422453 MAGI1Q96QZ7 1491 aaPredicted RBP24.2■■□□□ 1.46
CNBP-201ENST00000422453 ABCA5Q8WWZ7 1642 aa24.15■■□□□ 1.46
CNBP-201ENST00000422453 PBRM1Q86U86 1689 aa24.14■■□□□ 1.45
CNBP-201ENST00000422453 TRIM41Q8WV44 630 aa24.14■■□□□ 1.45
CNBP-201ENST00000422453 SYNJ2O15056 1496 aa24.11■■□□□ 1.45
CNBP-201ENST00000422453 RIMBP3CA6NJZ7 1639 aa24.02■■□□□ 1.44
CNBP-201ENST00000422453 RIMBP3BA6NNM3 1639 aa24.02■■□□□ 1.44
CNBP-201ENST00000422453 RIMBP3Q9UFD9 1639 aa24.02■■□□□ 1.44
CNBP-201ENST00000422453 ARHGEF11O15085 1522 aa24.01■■□□□ 1.43
CNBP-201ENST00000422453 ERICH3Q5RHP9 1530 aa23.97■■□□□ 1.43
CNBP-201ENST00000422453 FHAD1B1AJZ9 1412 aa23.95■■□□□ 1.42
CNBP-201ENST00000422453 ADAMTS12P58397 1594 aa23.94■■□□□ 1.42
CNBP-201ENST00000422453 CLASP1Q7Z460 1538 aa23.93■■□□□ 1.42
CNBP-201ENST00000422453 GRIN2AQ12879 1464 aa23.92■■□□□ 1.42
CNBP-201ENST00000422453 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
CNBP-201ENST00000422453 CYB5RLQ6IPT4 315 aa23.89■■□□□ 1.42
CNBP-201ENST00000422453 NUP160Q12769 1436 aa23.8■■□□□ 1.4
CNBP-201ENST00000422453 IGF1RP08069 1367 aa23.8■■□□□ 1.4
CNBP-201ENST00000422453 ARAP1Q96P48 1450 aa23.8■■□□□ 1.4
CNBP-201ENST00000422453 CEP170Q5SW79 1584 aa23.78■■□□□ 1.4
CNBP-201ENST00000422453 CUL7Q14999 1698 aa23.72■■□□□ 1.39
CNBP-201ENST00000422453 CARMIL1Q5VZK9 1371 aa23.68■■□□□ 1.38
CNBP-201ENST00000422453 JPH4Q96JJ6 628 aa23.64■■□□□ 1.38
CNBP-201ENST00000422453 SHROOM2Q13796 1616 aa23.61■■□□□ 1.37
CNBP-201ENST00000422453 ERCC6L2Q5T890 1561 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms