RNA–Protein interactions for RNA: ENST00000448424.6

ATP7B-206, Transcript of ATPase copper transporting beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP7B, Length 6,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-206ENST00000448424 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
ATP7B-206ENST00000448424 EHMT2Q96KQ7 1210 aa15.31■□□□□ 0.04
ATP7B-206ENST00000448424 NISCHQ9Y2I1 1504 aa14.99□□□□□ -0.01
ATP7B-206ENST00000448424 SUPT5HO00267 1087 aaKnown RBP14.85□□□□□ -0.03
ATP7B-206ENST00000448424 PELP1Q8IZL8 1130 aaKnown RBP14.8□□□□□ -0.04
ATP7B-206ENST00000448424 TTBK1Q5TCY1 1321 aaPredicted RBP14.73□□□□□ -0.05
ATP7B-206ENST00000448424 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
ATP7B-206ENST00000448424 ERICH6Q7L0X2 663 aa14.64□□□□□ -0.07
ATP7B-206ENST00000448424 MYT1Q01538 1121 aa14.53□□□□□ -0.08
ATP7B-206ENST00000448424 RANGAP1P46060 587 aaPredicted RBP14.44□□□□□ -0.1
ATP7B-206ENST00000448424 APLP2Q06481 763 aa14.39□□□□□ -0.11
ATP7B-206ENST00000448424 FAM9AQ8IZU1 332 aaPredicted RBP14.35□□□□□ -0.11
ATP7B-206ENST00000448424 ATP1B4Q9UN42 357 aaPredicted RBP14.27□□□□□ -0.12
ATP7B-206ENST00000448424 PCGF6Q9BYE7 350 aa14.23□□□□□ -0.13
ATP7B-206ENST00000448424 CCER1Q8TC90 406 aaPredicted RBP14.19□□□□□ -0.14
ATP7B-206ENST00000448424 YTHDC1Q96MU7 727 aaKnown RBP14.17□□□□□ -0.14
ATP7B-206ENST00000448424 CNGB1Q14028 1251 aaPredicted RBP14.02□□□□□ -0.17
ATP7B-206ENST00000448424 CHIC1Q5VXU3 224 aa13.99□□□□□ -0.17
ATP7B-206ENST00000448424 CENPBP07199 599 aaPredicted RBP13.93□□□□□ -0.18
ATP7B-206ENST00000448424 POLR3GLQ9BT43 218 aa13.93□□□□□ -0.18
ATP7B-206ENST00000448424 NEFLP07196 543 aa13.92□□□□□ -0.18
ATP7B-206ENST00000448424 MYT1LQ9UL68 1186 aa13.87□□□□□ -0.19
ATP7B-206ENST00000448424 DAXXQ9UER7 740 aaPredicted RBP13.86□□□□□ -0.19
ATP7B-206ENST00000448424 PPARGC1BQ86YN6 1023 aaKnown RBP13.81□□□□□ -0.2
ATP7B-206ENST00000448424 SLC4A1APQ9BWU0 796 aaKnown RBP13.76□□□□□ -0.21
ATP7B-206ENST00000448424 TRIM41Q8WV44 630 aa13.68□□□□□ -0.22
ATP7B-206ENST00000448424 UBTFP17480 764 aaKnown RBP13.66□□□□□ -0.22
ATP7B-206ENST00000448424 BCL11AQ9H165 835 aa13.65□□□□□ -0.22
ATP7B-206ENST00000448424 ABCC9O60706 1549 aa13.63□□□□□ -0.23
ATP7B-206ENST00000448424 ITGAEP38570 1179 aa13.62□□□□□ -0.23
ATP7B-206ENST00000448424 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.62□□□□□ -0.23
ATP7B-206ENST00000448424 HNRNPUL2Q1KMD3 747 aaKnown RBP13.62□□□□□ -0.23
ATP7B-206ENST00000448424 PABPN1Q86U42 306 aaKnown RBP eCLIP13.6□□□□□ -0.23
ATP7B-206ENST00000448424 CLSPNQ9HAW4 1339 aa13.55□□□□□ -0.24
ATP7B-206ENST00000448424 ZNF316A6NFI3 1004 aaPredicted RBP13.51□□□□□ -0.25
ATP7B-206ENST00000448424 SLC24A1O60721 1099 aa13.46□□□□□ -0.25
ATP7B-206ENST00000448424 ZEB1P37275 1124 aaPredicted RBP13.38□□□□□ -0.27
ATP7B-206ENST00000448424 RTL5Q5HYW3 569 aaPredicted RBP13.36□□□□□ -0.27
ATP7B-206ENST00000448424 FBLN2P98095 1184 aa13.32□□□□□ -0.28
ATP7B-206ENST00000448424 BCANQ96GW7 911 aa13.28□□□□□ -0.28
ATP7B-206ENST00000448424 ZBTB47Q9UFB7 747 aaPredicted RBP13.14□□□□□ -0.31
ATP7B-206ENST00000448424 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
ATP7B-206ENST00000448424 ZNF326Q5BKZ1 582 aaKnown RBP13.09□□□□□ -0.31
ATP7B-206ENST00000448424 EIF5BO60841 1220 aaKnown RBP13.05□□□□□ -0.32
ATP7B-206ENST00000448424 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
ATP7B-206ENST00000448424 CANXP27824 592 aaKnown RBP13.03□□□□□ -0.32
ATP7B-206ENST00000448424 HRCP23327 699 aa13.02□□□□□ -0.33
ATP7B-206ENST00000448424 TRIM52Q96A61 297 aa13.01□□□□□ -0.33
ATP7B-206ENST00000448424 NPM2Q86SE8 214 aaKnown RBP13□□□□□ -0.33
ATP7B-206ENST00000448424 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.33
ATP7B-206ENST00000448424 ARXQ96QS3 562 aa12.96□□□□□ -0.34
ATP7B-206ENST00000448424 ARID3CA6NKF2 412 aa12.94□□□□□ -0.34
ATP7B-206ENST00000448424 LOC105371045A0A1W2PR82 267 aa12.89□□□□□ -0.35
ATP7B-206ENST00000448424 A0A0G2JS52 829 aa12.88□□□□□ -0.35
ATP7B-206ENST00000448424 TRIM26Q12899 539 aaPredicted RBP12.88□□□□□ -0.35
ATP7B-206ENST00000448424 ESF1Q9H501 851 aaKnown RBP12.88□□□□□ -0.35
ATP7B-206ENST00000448424 TULP1O00294 542 aaPredicted RBP12.87□□□□□ -0.35
ATP7B-206ENST00000448424 NPM1P06748 294 aaKnown RBP eCLIP12.87□□□□□ -0.35
ATP7B-206ENST00000448424 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
ATP7B-206ENST00000448424 CDK11AQ9UQ88 783 aaPredicted RBP12.85□□□□□ -0.35
ATP7B-206ENST00000448424 DIEXFQ68CQ4 756 aaKnown RBP12.84□□□□□ -0.35
ATP7B-206ENST00000448424 P3H3Q8IVL6 736 aa12.82□□□□□ -0.36
ATP7B-206ENST00000448424 HSP90AA1P07900 732 aaKnown RBP12.79□□□□□ -0.36
ATP7B-206ENST00000448424 SCAF1Q9H7N4 1312 aaKnown RBP12.78□□□□□ -0.36
ATP7B-206ENST00000448424 NEFMP07197 916 aa12.78□□□□□ -0.36
ATP7B-206ENST00000448424 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
ATP7B-206ENST00000448424 SENP3Q9H4L4 574 aaPredicted RBP12.77□□□□□ -0.37
ATP7B-206ENST00000448424 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
ATP7B-206ENST00000448424 ZNF777Q9ULD5 760 aaPredicted RBP12.76□□□□□ -0.37
ATP7B-206ENST00000448424 GTF3C3Q9Y5Q9 886 aa12.76□□□□□ -0.37
ATP7B-206ENST00000448424 SALL2Q9Y467 1007 aaPredicted RBP12.74□□□□□ -0.37
ATP7B-206ENST00000448424 ANP32BQ92688 251 aaKnown RBP12.72□□□□□ -0.37
ATP7B-206ENST00000448424 ANP32CO43423 234 aa12.7□□□□□ -0.38
ATP7B-206ENST00000448424 TPRNQ4KMQ1 711 aa12.7□□□□□ -0.38
ATP7B-206ENST00000448424 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
ATP7B-206ENST00000448424 CDK11BP21127 795 aaKnown RBP12.68□□□□□ -0.38
ATP7B-206ENST00000448424 ANP32AP39687 249 aaKnown RBP12.67□□□□□ -0.38
ATP7B-206ENST00000448424 NBR1Q14596 966 aa12.67□□□□□ -0.38
ATP7B-206ENST00000448424 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
ATP7B-206ENST00000448424 CHGAP10645 457 aaKnown RBP12.65□□□□□ -0.38
ATP7B-206ENST00000448424 TAOK2Q9UL54 1235 aa12.64□□□□□ -0.39
ATP7B-206ENST00000448424 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
ATP7B-206ENST00000448424 TRHP20396 242 aaPredicted RBP12.55□□□□□ -0.4
ATP7B-206ENST00000448424 AMER1Q5JTC6 1135 aaPredicted RBP12.55□□□□□ -0.4
ATP7B-206ENST00000448424 ERCC6Q03468 1493 aa12.53□□□□□ -0.4
ATP7B-206ENST00000448424 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.41
ATP7B-206ENST00000448424 ARID4BQ4LE39 1312 aaPredicted RBP12.49□□□□□ -0.41
ATP7B-206ENST00000448424 SENP3-EIF4A1A0A087X0R7 540 aa12.48□□□□□ -0.41
ATP7B-206ENST00000448424 FKBP8Q14318 412 aa12.48□□□□□ -0.41
ATP7B-206ENST00000448424 GLIPR1L2Q4G1C9 344 aa12.48□□□□□ -0.41
ATP7B-206ENST00000448424 FAM9BQ8IZU0 186 aa12.48□□□□□ -0.41
ATP7B-206ENST00000448424 UPF2Q9HAU5 1272 aaKnown RBP12.47□□□□□ -0.41
ATP7B-206ENST00000448424 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
ATP7B-206ENST00000448424 KCNH8Q96L42 1107 aa12.47□□□□□ -0.41
ATP7B-206ENST00000448424 CSRNP3Q8WYN3 585 aa12.46□□□□□ -0.42
ATP7B-206ENST00000448424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.46□□□□□ -0.421e-6■■□□□ 12.8
ATP7B-206ENST00000448424 IRX6P78412 446 aaPredicted RBP12.43□□□□□ -0.42
ATP7B-206ENST00000448424 NCLP19338 710 aaKnown RBP12.4□□□□□ -0.42
ATP7B-206ENST00000448424 CLSTN1O94985 981 aa12.37□□□□□ -0.43
ATP7B-206ENST00000448424 HNRNPUQ00839 825 aaKnown RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms