RNA–Protein interactions for RNA: ENST00000442415.6

RAF1-205, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene RAF1, Length 3,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-205ENST00000442415 NISCHQ9Y2I1 1504 aa30.17■■■□□ 2.42
RAF1-205ENST00000442415 SHROOM4Q9ULL8 1493 aa27.13■■□□□ 1.93
RAF1-205ENST00000442415 SUPT5HO00267 1087 aaKnown RBP26.75■■□□□ 1.87
RAF1-205ENST00000442415 DCAF8L2P0C7V8 631 aa26.61■■□□□ 1.85
RAF1-205ENST00000442415 CHIC1Q5VXU3 224 aa25.5■■□□□ 1.67
RAF1-205ENST00000442415 ZCCHC6Q5VYS8 1495 aaKnown RBP25.42■■□□□ 1.66
RAF1-205ENST00000442415 PCGF6Q9BYE7 350 aa25.4■■□□□ 1.66
RAF1-205ENST00000442415 HRCP23327 699 aa25.38■■□□□ 1.65
RAF1-205ENST00000442415 MYO15BQ96JP2 1530 aa25.31■■□□□ 1.64
RAF1-205ENST00000442415 PPARGC1BQ86YN6 1023 aaKnown RBP25.24■■□□□ 1.63
RAF1-205ENST00000442415 LOC105371045A0A1W2PR82 267 aa25.23■■□□□ 1.63
RAF1-205ENST00000442415 EHMT2Q96KQ7 1210 aa25.18■■□□□ 1.62
RAF1-205ENST00000442415 CCDC180Q9P1Z9 1646 aa24.99■■□□□ 1.59
RAF1-205ENST00000442415 FAM9AQ8IZU1 332 aaPredicted RBP24.93■■□□□ 1.58
RAF1-205ENST00000442415 PELP1Q8IZL8 1130 aaKnown RBP24.67■■□□□ 1.54
RAF1-205ENST00000442415 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
RAF1-205ENST00000442415 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
RAF1-205ENST00000442415 TRIM26Q12899 539 aaPredicted RBP24.36■■□□□ 1.49
RAF1-205ENST00000442415 SCAF1Q9H7N4 1312 aaKnown RBP24.31■■□□□ 1.48
RAF1-205ENST00000442415 TTBK1Q5TCY1 1321 aaPredicted RBP24.3■■□□□ 1.48
RAF1-205ENST00000442415 ABCC9O60706 1549 aa24.25■■□□□ 1.47
RAF1-205ENST00000442415 DCAF1Q9Y4B6 1507 aa24.18■■□□□ 1.46
RAF1-205ENST00000442415 RSF1Q96T23 1441 aaPredicted RBP24.18■■□□□ 1.46
RAF1-205ENST00000442415 RB1CC1Q8TDY2 1594 aa23.96■■□□□ 1.43
RAF1-205ENST00000442415 CECR2Q9BXF3 1484 aa23.94■■□□□ 1.42
RAF1-205ENST00000442415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.85■■□□□ 1.41
RAF1-205ENST00000442415 CCER1Q8TC90 406 aaPredicted RBP23.73■■□□□ 1.39
RAF1-205ENST00000442415 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
RAF1-205ENST00000442415 ZEB1P37275 1124 aaPredicted RBP23.7■■□□□ 1.38
RAF1-205ENST00000442415 MYT1Q01538 1121 aa23.68■■□□□ 1.38
RAF1-205ENST00000442415 RANGAP1P46060 587 aaPredicted RBP23.66■■□□□ 1.38
RAF1-205ENST00000442415 PABPN1Q86U42 306 aaKnown RBP eCLIP23.64■■□□□ 1.37
RAF1-205ENST00000442415 NEUROD1Q13562 356 aa23.6■■□□□ 1.37
RAF1-205ENST00000442415 UBTFP17480 764 aaKnown RBP23.58■■□□□ 1.37
RAF1-205ENST00000442415 WIZO95785 1651 aa23.56■■□□□ 1.36
RAF1-205ENST00000442415 GTF3C3Q9Y5Q9 886 aa23.54■■□□□ 1.36
RAF1-205ENST00000442415 ACIN1Q9UKV3 1341 aaKnown RBP23.54■■□□□ 1.36
RAF1-205ENST00000442415 NACADO15069 1562 aa23.36■■□□□ 1.33
RAF1-205ENST00000442415 ABCC8Q09428 1581 aa23.36■■□□□ 1.33
RAF1-205ENST00000442415 HNRNPUL2Q1KMD3 747 aaKnown RBP23.29■■□□□ 1.32
RAF1-205ENST00000442415 CCDC88BA6NC98 1476 aa23.27■■□□□ 1.32
RAF1-205ENST00000442415 SOGA1O94964 1423 aa23.25■■□□□ 1.31
RAF1-205ENST00000442415 CENPBP07199 599 aaPredicted RBP23.22■■□□□ 1.31
RAF1-205ENST00000442415 YTHDC1Q96MU7 727 aaKnown RBP23.21■■□□□ 1.31
RAF1-205ENST00000442415 CSRNP3Q8WYN3 585 aa23.19■■□□□ 1.3
RAF1-205ENST00000442415 DIEXFQ68CQ4 756 aaKnown RBP23.18■■□□□ 1.3
RAF1-205ENST00000442415 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.29
RAF1-205ENST00000442415 BAZ1AQ9NRL2 1556 aaPredicted RBP23.1■■□□□ 1.29
RAF1-205ENST00000442415 CEP162Q5TB80 1403 aa23.1■■□□□ 1.29
RAF1-205ENST00000442415 APLP2Q06481 763 aa23.02■■□□□ 1.28
RAF1-205ENST00000442415 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.26
RAF1-205ENST00000442415 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
RAF1-205ENST00000442415 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
RAF1-205ENST00000442415 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
RAF1-205ENST00000442415 ITGAEP38570 1179 aa22.83■■□□□ 1.25
RAF1-205ENST00000442415 WRNQ14191 1432 aaPredicted RBP eCLIP22.8■■□□□ 1.242e-6■■□□□ 11.9
RAF1-205ENST00000442415 ZNF316A6NFI3 1004 aaPredicted RBP22.8■■□□□ 1.24
RAF1-205ENST00000442415 EIF4G1Q04637 1599 aaKnown RBP22.73■■□□□ 1.23
RAF1-205ENST00000442415 MIER1Q8N108 512 aa22.71■■□□□ 1.23
RAF1-205ENST00000442415 GOLGA3Q08378 1498 aa22.7■■□□□ 1.22
RAF1-205ENST00000442415 CLIP1P30622 1438 aa22.69■■□□□ 1.22
RAF1-205ENST00000442415 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
RAF1-205ENST00000442415 UNC13AQ9UPW8 1703 aa22.6■■□□□ 1.21
RAF1-205ENST00000442415 EEA1Q15075 1411 aa22.56■■□□□ 1.2
RAF1-205ENST00000442415 BCL11AQ9H165 835 aa22.55■■□□□ 1.2
RAF1-205ENST00000442415 RAPGEF2Q9Y4G8 1499 aa22.55■■□□□ 1.2
RAF1-205ENST00000442415 BAZ1BQ9UIG0 1483 aaKnown RBP22.52■■□□□ 1.2
RAF1-205ENST00000442415 SYNJ1O43426 1573 aa22.51■■□□□ 1.19
RAF1-205ENST00000442415 KANK4Q5T7N3 995 aaPredicted RBP22.51■■□□□ 1.19
RAF1-205ENST00000442415 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
RAF1-205ENST00000442415 P3H3Q8IVL6 736 aa22.44■■□□□ 1.18
RAF1-205ENST00000442415 BICRAQ9NZM4 1560 aa22.44■■□□□ 1.18
RAF1-205ENST00000442415 ATAD2BQ9ULI0 1458 aa22.44■■□□□ 1.18
RAF1-205ENST00000442415 VPS8Q8N3P4 1428 aa22.39■■□□□ 1.18
RAF1-205ENST00000442415 ANP32EQ9BTT0 268 aa22.31■■□□□ 1.16
RAF1-205ENST00000442415 FAM50AQ14320 339 aaKnown RBP22.27■■□□□ 1.16
RAF1-205ENST00000442415 HIRIP3Q9BW71 556 aaPredicted RBP22.23■■□□□ 1.15
RAF1-205ENST00000442415 KIF21BO75037 1637 aa22.22■■□□□ 1.15
RAF1-205ENST00000442415 SUPT16HQ9Y5B9 1047 aaKnown RBP22.2■■□□□ 1.14
RAF1-205ENST00000442415 TSHZ2Q9NRE2 1034 aa22.18■■□□□ 1.14
RAF1-205ENST00000442415 KCNH8Q96L42 1107 aa22.12■■□□□ 1.13
RAF1-205ENST00000442415 DHX57Q6P158 1386 aaKnown RBP22.12■■□□□ 1.13
RAF1-205ENST00000442415 SIN3AQ96ST3 1273 aa22.1■■□□□ 1.13
RAF1-205ENST00000442415 BCANQ96GW7 911 aa22.1■■□□□ 1.13
RAF1-205ENST00000442415 ARAP1Q96P48 1450 aa22.09■■□□□ 1.13
RAF1-205ENST00000442415 KIF27Q86VH2 1401 aa22.06■■□□□ 1.12
RAF1-205ENST00000442415 DDX10Q13206 875 aaKnown RBP22.04■■□□□ 1.12
RAF1-205ENST00000442415 PEG3Q9GZU2 1588 aa22.02■■□□□ 1.12
RAF1-205ENST00000442415 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
RAF1-205ENST00000442415 CUX2O14529 1486 aa21.99■■□□□ 1.11
RAF1-205ENST00000442415 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
RAF1-205ENST00000442415 CUX1P39880 1505 aa21.97■■□□□ 1.11
RAF1-205ENST00000442415 ARID3CA6NKF2 412 aa21.96■■□□□ 1.11
RAF1-205ENST00000442415 PRXQ9BXM0 1461 aa21.95■■□□□ 1.1
RAF1-205ENST00000442415 RAB3GAP2Q9H2M9 1393 aa21.92■■□□□ 1.1
RAF1-205ENST00000442415 ARHGAP35Q9NRY4 1499 aa21.88■■□□□ 1.09
RAF1-205ENST00000442415 CARMIL1Q5VZK9 1371 aa21.87■■□□□ 1.09
RAF1-205ENST00000442415 IGF1RP08069 1367 aa21.85■■□□□ 1.09
RAF1-205ENST00000442415 TRIM52Q96A61 297 aa21.84■■□□□ 1.09
RAF1-205ENST00000442415 CNGB1Q14028 1251 aaPredicted RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms