RNA–Protein interactions for RNA: ENST00000641691.1

PPT1-217, Transcript of palmitoyl-protein thioesterase 1, humanhuman

Gene PPT1, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-217ENST00000641691 NISCHQ9Y2I1 1504 aa27.81■■■□□ 2.04
PPT1-217ENST00000641691 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
PPT1-217ENST00000641691 ZCCHC6Q5VYS8 1495 aaKnown RBP23.59■■□□□ 1.37
PPT1-217ENST00000641691 CCDC180Q9P1Z9 1646 aa23.59■■□□□ 1.37
PPT1-217ENST00000641691 SUPT5HO00267 1087 aaKnown RBP23.53■■□□□ 1.36
PPT1-217ENST00000641691 MYO15BQ96JP2 1530 aa23.04■■□□□ 1.28
PPT1-217ENST00000641691 CHIC1Q5VXU3 224 aa23.01■■□□□ 1.27
PPT1-217ENST00000641691 DCAF8L2P0C7V8 631 aa22.93■■□□□ 1.26
PPT1-217ENST00000641691 DCAF1Q9Y4B6 1507 aa22.82■■□□□ 1.24
PPT1-217ENST00000641691 HRCP23327 699 aa22.79■■□□□ 1.24
PPT1-217ENST00000641691 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
PPT1-217ENST00000641691 ABCC9O60706 1549 aa22.35■■□□□ 1.17
PPT1-217ENST00000641691 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.17
PPT1-217ENST00000641691 PPARGC1BQ86YN6 1023 aaKnown RBP22.25■■□□□ 1.15
PPT1-217ENST00000641691 SCRIBQ14160 1630 aa22.13■■□□□ 1.13
PPT1-217ENST00000641691 TRIM26Q12899 539 aaPredicted RBP22.1■■□□□ 1.13
PPT1-217ENST00000641691 RSF1Q96T23 1441 aaPredicted RBP22.09■■□□□ 1.13
PPT1-217ENST00000641691 RB1CC1Q8TDY2 1594 aa21.96■■□□□ 1.11
PPT1-217ENST00000641691 TRIM41Q8WV44 630 aa21.9■■□□□ 1.1
PPT1-217ENST00000641691 ZEB1P37275 1124 aaPredicted RBP21.75■■□□□ 1.07
PPT1-217ENST00000641691 FAM9AQ8IZU1 332 aaPredicted RBP21.73■■□□□ 1.07
PPT1-217ENST00000641691 NACADO15069 1562 aa21.7■■□□□ 1.06
PPT1-217ENST00000641691 CECR2Q9BXF3 1484 aa21.66■■□□□ 1.06
PPT1-217ENST00000641691 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.05
PPT1-217ENST00000641691 WIZO95785 1651 aa21.58■■□□□ 1.05
PPT1-217ENST00000641691 EHMT2Q96KQ7 1210 aa21.54■■□□□ 1.04
PPT1-217ENST00000641691 BAZ1AQ9NRL2 1556 aaPredicted RBP21.47■■□□□ 1.03
PPT1-217ENST00000641691 EIF4G1Q04637 1599 aaKnown RBP21.41■■□□□ 1.02
PPT1-217ENST00000641691 TOP2AP11388 1531 aaKnown RBP21.22■□□□□ 0.99
PPT1-217ENST00000641691 ABCC8Q09428 1581 aa21.18■□□□□ 0.98
PPT1-217ENST00000641691 SMARCA4P51532 1647 aa21.16■□□□□ 0.98
PPT1-217ENST00000641691 SCAF1Q9H7N4 1312 aaKnown RBP21.16■□□□□ 0.98
PPT1-217ENST00000641691 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
PPT1-217ENST00000641691 CCER1Q8TC90 406 aaPredicted RBP21.12■□□□□ 0.97
PPT1-217ENST00000641691 CCDC88BA6NC98 1476 aa21.12■□□□□ 0.97
PPT1-217ENST00000641691 SMARCA2P51531 1590 aa21.12■□□□□ 0.97
PPT1-217ENST00000641691 WRNQ14191 1432 aaPredicted RBP eCLIP21.09■□□□□ 0.97
PPT1-217ENST00000641691 UNC13AQ9UPW8 1703 aa21.09■□□□□ 0.97
PPT1-217ENST00000641691 PELP1Q8IZL8 1130 aaKnown RBP21.06■□□□□ 0.96
PPT1-217ENST00000641691 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
PPT1-217ENST00000641691 SOGA1O94964 1423 aa20.99■□□□□ 0.95
PPT1-217ENST00000641691 TNIKQ9UKE5 1360 aa20.97■□□□□ 0.95
PPT1-217ENST00000641691 EEA1Q15075 1411 aa20.95■□□□□ 0.94
PPT1-217ENST00000641691 TTBK1Q5TCY1 1321 aaPredicted RBP20.93■□□□□ 0.94
PPT1-217ENST00000641691 RUSC2Q8N2Y8 1516 aa20.88■□□□□ 0.93
PPT1-217ENST00000641691 CSRNP3Q8WYN3 585 aa20.88■□□□□ 0.93
PPT1-217ENST00000641691 ACIN1Q9UKV3 1341 aaKnown RBP20.87■□□□□ 0.93
PPT1-217ENST00000641691 DIEXFQ68CQ4 756 aaKnown RBP20.86■□□□□ 0.93
PPT1-217ENST00000641691 GOLGA3Q08378 1498 aa20.83■□□□□ 0.93
PPT1-217ENST00000641691 UBTFP17480 764 aaKnown RBP20.83■□□□□ 0.92
PPT1-217ENST00000641691 NEUROD1Q13562 356 aa20.81■□□□□ 0.92
PPT1-217ENST00000641691 PEG3Q9GZU2 1588 aa20.73■□□□□ 0.91
PPT1-217ENST00000641691 CENPBP07199 599 aaPredicted RBP20.73■□□□□ 0.91
PPT1-217ENST00000641691 BICRAQ9NZM4 1560 aa20.72■□□□□ 0.91
PPT1-217ENST00000641691 KIF21BO75037 1637 aa20.69■□□□□ 0.9
PPT1-217ENST00000641691 SYNJ1O43426 1573 aa20.68■□□□□ 0.9
PPT1-217ENST00000641691 CEP164Q9UPV0 1460 aa20.68■□□□□ 0.9
PPT1-217ENST00000641691 ZNF316A6NFI3 1004 aaPredicted RBP20.64■□□□□ 0.89
PPT1-217ENST00000641691 PABPN1Q86U42 306 aaKnown RBP eCLIP20.64■□□□□ 0.89
PPT1-217ENST00000641691 GTF3C3Q9Y5Q9 886 aa20.64■□□□□ 0.89
PPT1-217ENST00000641691 CLIP1P30622 1438 aa20.59■□□□□ 0.89
PPT1-217ENST00000641691 VPS8Q8N3P4 1428 aa20.54■□□□□ 0.88
PPT1-217ENST00000641691 BAZ1BQ9UIG0 1483 aaKnown RBP20.54■□□□□ 0.88
PPT1-217ENST00000641691 HNRNPUL2Q1KMD3 747 aaKnown RBP20.52■□□□□ 0.88
PPT1-217ENST00000641691 ATAD2BQ9ULI0 1458 aa20.51■□□□□ 0.87
PPT1-217ENST00000641691 RAPGEF2Q9Y4G8 1499 aa20.48■□□□□ 0.87
PPT1-217ENST00000641691 APLP2Q06481 763 aa20.43■□□□□ 0.86
PPT1-217ENST00000641691 TOP2BQ02880 1626 aa20.41■□□□□ 0.86
PPT1-217ENST00000641691 YTHDC1Q96MU7 727 aaKnown RBP20.38■□□□□ 0.85
PPT1-217ENST00000641691 MIER1Q8N108 512 aa20.37■□□□□ 0.85
PPT1-217ENST00000641691 BIVM-ERCC5R4GMW8 1640 aa20.36■□□□□ 0.85
PPT1-217ENST00000641691 RANGAP1P46060 587 aaPredicted RBP20.33■□□□□ 0.85
PPT1-217ENST00000641691 DNAJC5BQ9UF47 199 aa20.33■□□□□ 0.85
PPT1-217ENST00000641691 ERICH3Q5RHP9 1530 aa20.3■□□□□ 0.84
PPT1-217ENST00000641691 PRXQ9BXM0 1461 aa20.25■□□□□ 0.83
PPT1-217ENST00000641691 ARAP1Q96P48 1450 aa20.24■□□□□ 0.83
PPT1-217ENST00000641691 CLSPNQ9HAW4 1339 aa20.21■□□□□ 0.83
PPT1-217ENST00000641691 DHX57Q6P158 1386 aaKnown RBP20.19■□□□□ 0.82
PPT1-217ENST00000641691 CUX1P39880 1505 aa20.13■□□□□ 0.81
PPT1-217ENST00000641691 KANK4Q5T7N3 995 aaPredicted RBP20.13■□□□□ 0.81
PPT1-217ENST00000641691 HMGXB3Q12766 1538 aa20.11■□□□□ 0.81
PPT1-217ENST00000641691 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
PPT1-217ENST00000641691 KIF27Q86VH2 1401 aa20.09■□□□□ 0.81
PPT1-217ENST00000641691 MYT1Q01538 1121 aa20.06■□□□□ 0.8
PPT1-217ENST00000641691 NCAPD3P42695 1498 aa20.05■□□□□ 0.8
PPT1-217ENST00000641691 CUX2O14529 1486 aa20.04■□□□□ 0.8
PPT1-217ENST00000641691 ARHGAP35Q9NRY4 1499 aa20.01■□□□□ 0.79
PPT1-217ENST00000641691 CCNB3Q8WWL7 1395 aa19.99■□□□□ 0.79
PPT1-217ENST00000641691 CFTRP13569 1480 aa19.98■□□□□ 0.79
PPT1-217ENST00000641691 PRDM2Q13029 1718 aa19.96■□□□□ 0.79
PPT1-217ENST00000641691 TIAM1Q13009 1591 aa19.88■□□□□ 0.77
PPT1-217ENST00000641691 ITGAEP38570 1179 aa19.88■□□□□ 0.77
PPT1-217ENST00000641691 MAP3K1Q13233 1512 aa19.85■□□□□ 0.77
PPT1-217ENST00000641691 RAB3GAP2Q9H2M9 1393 aa19.85■□□□□ 0.77
PPT1-217ENST00000641691 MAPKBP1O60336 1514 aa19.84■□□□□ 0.77
PPT1-217ENST00000641691 SUPT16HQ9Y5B9 1047 aaKnown RBP19.82■□□□□ 0.76
PPT1-217ENST00000641691 IGF1RP08069 1367 aa19.82■□□□□ 0.76
PPT1-217ENST00000641691 LRRC9Q6ZRR7 1453 aa19.77■□□□□ 0.76
PPT1-217ENST00000641691 SETD5Q9C0A6 1442 aa19.76■□□□□ 0.75
PPT1-217ENST00000641691 CARMIL1Q5VZK9 1371 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms