RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 NISCHQ9Y2I1 1504 aa21,84■■□□□ 1,09
COPB1-210ENST00000533533 ABCC9O60706 1549 aa19,76■□□□□ 0,75
COPB1-210ENST00000533533 CCDC180Q9P1Z9 1646 aa19,65■□□□□ 0,74
COPB1-210ENST00000533533 AEBP2Q6ZN18 517 aaPredicted RBP19,37■□□□□ 0,69
COPB1-210ENST00000533533 RB1CC1Q8TDY2 1594 aa18,76■□□□□ 0,59
COPB1-210ENST00000533533 DNAJC5BQ9UF47 199 aa18,66■□□□□ 0,58
COPB1-210ENST00000533533 NACADO15069 1562 aa18,61■□□□□ 0,57
COPB1-210ENST00000533533 DCAF8L2P0C7V8 631 aa18,48■□□□□ 0,55
COPB1-210ENST00000533533 CHIC1Q5VXU3 224 aa18,46■□□□□ 0,55
COPB1-210ENST00000533533 PABPN1Q86U42 306 aaKnown RBP eCLIP18,38■□□□□ 0,53
COPB1-210ENST00000533533 UNC13AQ9UPW8 1703 aa18,37■□□□□ 0,53
COPB1-210ENST00000533533 MYO15BQ96JP2 1530 aa18,32■□□□□ 0,52
COPB1-210ENST00000533533 BICRAQ9NZM4 1560 aa18,22■□□□□ 0,51
COPB1-210ENST00000533533 ZCCHC6Q5VYS8 1495 aaKnown RBP18,06■□□□□ 0,48
COPB1-210ENST00000533533 DCAF1Q9Y4B6 1507 aa18,03■□□□□ 0,48
COPB1-210ENST00000533533 SHROOM4Q9ULL8 1493 aa17,97■□□□□ 0,47
COPB1-210ENST00000533533 SCRIBQ14160 1630 aa17,89■□□□□ 0,45
COPB1-210ENST00000533533 CC2D2AQ9P2K1 1620 aa17,86■□□□□ 0,45
COPB1-210ENST00000533533 CECR2Q9BXF3 1484 aa17,82■□□□□ 0,44
COPB1-210ENST00000533533 EIF4G1Q04637 1599 aaKnown RBP17,79■□□□□ 0,44
COPB1-210ENST00000533533 DNAJC5Q9H3Z4 198 aa17,24■□□□□ 0,35
COPB1-210ENST00000533533 NCAPD3P42695 1498 aa17,18■□□□□ 0,34
COPB1-210ENST00000533533 ATAD2BQ9ULI0 1458 aa17,11■□□□□ 0,33
COPB1-210ENST00000533533 CUX2O14529 1486 aa17,09■□□□□ 0,33
COPB1-210ENST00000533533 ERCC6Q03468 1493 aa17,07■□□□□ 0,32
COPB1-210ENST00000533533 SMARCA4P51532 1647 aa17,06■□□□□ 0,32
COPB1-210ENST00000533533 SMARCA2P51531 1590 aa17,06■□□□□ 0,32
COPB1-210ENST00000533533 HMGXB3Q12766 1538 aa17,04■□□□□ 0,32
COPB1-210ENST00000533533 BAZ1AQ9NRL2 1556 aaPredicted RBP16,95■□□□□ 0,3
COPB1-210ENST00000533533 NESP48681 1621 aa16,95■□□□□ 0,3
COPB1-210ENST00000533533 BAZ1BQ9UIG0 1483 aaKnown RBP16,93■□□□□ 0,3
COPB1-210ENST00000533533 PEG3Q9GZU2 1588 aa16,9■□□□□ 0,3
COPB1-210ENST00000533533 MROH2BQ7Z745 1585 aa16,82■□□□□ 0,28
COPB1-210ENST00000533533 LAMC3Q9Y6N6 1575 aa16,81■□□□□ 0,28
COPB1-210ENST00000533533 THOC2Q8NI27 1593 aaKnown RBP16,8■□□□□ 0,28
COPB1-210ENST00000533533 KIF21AQ7Z4S6 1674 aa16,74■□□□□ 0,27
COPB1-210ENST00000533533 PDS5BQ9NTI5 1447 aa16,71■□□□□ 0,27
COPB1-210ENST00000533533 CADPSQ9ULU8 1353 aa16,65■□□□□ 0,26
COPB1-210ENST00000533533 WIZO95785 1651 aa16,62■□□□□ 0,25
COPB1-210ENST00000533533 SENP3Q9H4L4 574 aaPredicted RBP16,59■□□□□ 0,25
COPB1-210ENST00000533533 MRC2Q9UBG0 1479 aa16,57■□□□□ 0,24
COPB1-210ENST00000533533 WDR62O43379 1518 aa16,55■□□□□ 0,24
COPB1-210ENST00000533533 CEP164Q9UPV0 1460 aa16,48■□□□□ 0,23
COPB1-210ENST00000533533 FANCD2Q9BXW9 1451 aa16,46■□□□□ 0,23
COPB1-210ENST00000533533 CFTRP13569 1480 aa16,44■□□□□ 0,22
COPB1-210ENST00000533533 RSF1Q96T23 1441 aaPredicted RBP16,43■□□□□ 0,22
COPB1-210ENST00000533533 TRIM41Q8WV44 630 aa16,41■□□□□ 0,22
COPB1-210ENST00000533533 TOP2AP11388 1531 aaKnown RBP16,39■□□□□ 0,21
COPB1-210ENST00000533533 PHF23Q9BUL5 403 aaPredicted RBP16,35■□□□□ 0,21
COPB1-210ENST00000533533 URB2Q14146 1524 aaKnown RBP16,33■□□□□ 0,2
COPB1-210ENST00000533533 OSCARQ8IYS5 282 aa16,3■□□□□ 0,2
COPB1-210ENST00000533533 PRDM2Q13029 1718 aa16,29■□□□□ 0,2
COPB1-210ENST00000533533 CCDC88BA6NC98 1476 aa16,21■□□□□ 0,19
COPB1-210ENST00000533533 IFT140Q96RY7 1462 aa16,16■□□□□ 0,18
COPB1-210ENST00000533533 ZNF608Q9ULD9 1512 aaPredicted RBP16,15■□□□□ 0,18
COPB1-210ENST00000533533 TOPBP1Q92547 1522 aa16,14■□□□□ 0,17
COPB1-210ENST00000533533 ABCC8Q09428 1581 aa16,1■□□□□ 0,17
COPB1-210ENST00000533533 RIMBP3CA6NJZ7 1639 aa16,09■□□□□ 0,17
COPB1-210ENST00000533533 RIMBP3BA6NNM3 1639 aa16,09■□□□□ 0,17
COPB1-210ENST00000533533 RIMBP3Q9UFD9 1639 aa16,09■□□□□ 0,17
COPB1-210ENST00000533533 DNMBPQ6XZF7 1577 aa16,06■□□□□ 0,16
COPB1-210ENST00000533533 EIF4G3O43432 1585 aaKnown RBP16,05■□□□□ 0,16
COPB1-210ENST00000533533 ARHGEF11O15085 1522 aa16,03■□□□□ 0,16
COPB1-210ENST00000533533 TARBP1Q13395 1621 aaKnown RBP16,01■□□□□ 0,15
COPB1-210ENST00000533533 AQRO60306 1485 aaKnown RBP eCLIP15,99■□□□□ 0,155e-9■■■■□ 26,6
COPB1-210ENST00000533533 CHD1O14646 1710 aa15,98■□□□□ 0,15
COPB1-210ENST00000533533 POLA1P09884 1462 aaPredicted RBP15,97■□□□□ 0,15
COPB1-210ENST00000533533 CYB5RLQ6IPT4 315 aa15,93■□□□□ 0,14
COPB1-210ENST00000533533 FBLN2P98095 1184 aa15,91■□□□□ 0,14
COPB1-210ENST00000533533 RAD54L2Q9Y4B4 1467 aa15,91■□□□□ 0,14
COPB1-210ENST00000533533 SOGA1O94964 1423 aa15,88■□□□□ 0,13
COPB1-210ENST00000533533 TDRD9Q8NDG6 1382 aaKnown RBP15,87■□□□□ 0,13
COPB1-210ENST00000533533 ARAP1Q96P48 1450 aa15,86■□□□□ 0,13
COPB1-210ENST00000533533 FGD5Q6ZNL6 1462 aa15,84■□□□□ 0,13
COPB1-210ENST00000533533 WDR97A6NE52 1622 aa15,83■□□□□ 0,13
COPB1-210ENST00000533533 CUX1P39880 1505 aa15,81■□□□□ 0,12
COPB1-210ENST00000533533 SNAPC4Q5SXM2 1469 aa15,81■□□□□ 0,12
COPB1-210ENST00000533533 MAGI1Q96QZ7 1491 aaPredicted RBP15,78■□□□□ 0,12
COPB1-210ENST00000533533 CHMP7Q8WUX9 453 aaPredicted RBP15,78■□□□□ 0,12
COPB1-210ENST00000533533 CLASP1Q7Z460 1538 aa15,78■□□□□ 0,12
COPB1-210ENST00000533533 TRHP20396 242 aaPredicted RBP15,77■□□□□ 0,12
COPB1-210ENST00000533533 GRIN2BQ13224 1484 aa15,77■□□□□ 0,11
COPB1-210ENST00000533533 SYNJ1O43426 1573 aa15,75■□□□□ 0,11
COPB1-210ENST00000533533 SYNJ2O15056 1496 aa15,72■□□□□ 0,11
COPB1-210ENST00000533533 PBRM1Q86U86 1689 aa15,7■□□□□ 0,1
COPB1-210ENST00000533533 GAPVD1Q14C86 1478 aa15,7■□□□□ 0,1
COPB1-210ENST00000533533 ABCA10Q8WWZ4 1543 aa15,66■□□□□ 0,1
COPB1-210ENST00000533533 ABCA5Q8WWZ7 1642 aa15,65■□□□□ 0,1
COPB1-210ENST00000533533 SUPT5HO00267 1087 aaKnown RBP15,61■□□□□ 0,09
COPB1-210ENST00000533533 WRNQ14191 1432 aaPredicted RBP eCLIP15,58■□□□□ 0,08
COPB1-210ENST00000533533 GRIN2AQ12879 1464 aa15,56■□□□□ 0,08
COPB1-210ENST00000533533 ADAMTS12P58397 1594 aa15,53■□□□□ 0,08
COPB1-210ENST00000533533 TOP2BQ02880 1626 aa15,53■□□□□ 0,08
COPB1-210ENST00000533533 BIVM-ERCC5R4GMW8 1640 aa15,53■□□□□ 0,08
COPB1-210ENST00000533533 ERCC6L2Q5T890 1561 aa15,52■□□□□ 0,07
COPB1-210ENST00000533533 NUP160Q12769 1436 aa15,51■□□□□ 0,07
COPB1-210ENST00000533533 CEP170Q5SW79 1584 aa15,51■□□□□ 0,07
COPB1-210ENST00000533533 FHAD1B1AJZ9 1412 aa15,49■□□□□ 0,07
COPB1-210ENST00000533533 SHROOM2Q13796 1616 aa15,47■□□□□ 0,07
COPB1-210ENST00000533533 ERICH3Q5RHP9 1530 aa15,47■□□□□ 0,07
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