RNA–Protein interactions for RNA: ENST00000488478.5

CUTA-211, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 5 BASIC

Gene CUTA, Length 676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-211ENST00000488478 NISCHQ9Y2I1 1504 aa25.84■■□□□ 1.73
CUTA-211ENST00000488478 CCDC180Q9P1Z9 1646 aa22.97■■□□□ 1.27
CUTA-211ENST00000488478 ABCC9O60706 1549 aa22.2■■□□□ 1.14
CUTA-211ENST00000488478 ZCCHC6Q5VYS8 1495 aaKnown RBP21.61■■□□□ 1.05
CUTA-211ENST00000488478 NACADO15069 1562 aa21.46■■□□□ 1.03
CUTA-211ENST00000488478 RB1CC1Q8TDY2 1594 aa21.44■■□□□ 1.02
CUTA-211ENST00000488478 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
CUTA-211ENST00000488478 DCAF1Q9Y4B6 1507 aa21.39■■□□□ 1.01
CUTA-211ENST00000488478 DCAF8L2P0C7V8 631 aa21.31■■□□□ 1
CUTA-211ENST00000488478 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
CUTA-211ENST00000488478 SCRIBQ14160 1630 aa20.96■□□□□ 0.95
CUTA-211ENST00000488478 BICRAQ9NZM4 1560 aa20.89■□□□□ 0.94
CUTA-211ENST00000488478 PABPN1Q86U42 306 aaKnown RBP eCLIP20.7■□□□□ 0.9
CUTA-211ENST00000488478 SHROOM4Q9ULL8 1493 aa20.56■□□□□ 0.88
CUTA-211ENST00000488478 EIF4G1Q04637 1599 aaKnown RBP20.26■□□□□ 0.83
CUTA-211ENST00000488478 DNAJC5BQ9UF47 199 aa20.18■□□□□ 0.82
CUTA-211ENST00000488478 CC2D2AQ9P2K1 1620 aa20.15■□□□□ 0.82
CUTA-211ENST00000488478 CECR2Q9BXF3 1484 aa20.13■□□□□ 0.81
CUTA-211ENST00000488478 SMARCA4P51532 1647 aa20.07■□□□□ 0.8
CUTA-211ENST00000488478 BAZ1AQ9NRL2 1556 aaPredicted RBP20■□□□□ 0.79
CUTA-211ENST00000488478 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
CUTA-211ENST00000488478 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
CUTA-211ENST00000488478 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
CUTA-211ENST00000488478 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
CUTA-211ENST00000488478 WIZO95785 1651 aa19.79■□□□□ 0.76
CUTA-211ENST00000488478 NCAPD3P42695 1498 aa19.77■□□□□ 0.76
CUTA-211ENST00000488478 HMGXB3Q12766 1538 aa19.76■□□□□ 0.75
CUTA-211ENST00000488478 RSF1Q96T23 1441 aaPredicted RBP19.74■□□□□ 0.75
CUTA-211ENST00000488478 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
CUTA-211ENST00000488478 TOP2AP11388 1531 aaKnown RBP19.54■□□□□ 0.72
CUTA-211ENST00000488478 NESP48681 1621 aa19.31■□□□□ 0.68
CUTA-211ENST00000488478 SUPT5HO00267 1087 aaKnown RBP19.27■□□□□ 0.68
CUTA-211ENST00000488478 CCDC88BA6NC98 1476 aa19.27■□□□□ 0.67
CUTA-211ENST00000488478 LAMC3Q9Y6N6 1575 aa19.26■□□□□ 0.67
CUTA-211ENST00000488478 PRDM2Q13029 1718 aa19.21■□□□□ 0.67
CUTA-211ENST00000488478 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
CUTA-211ENST00000488478 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
CUTA-211ENST00000488478 CFTRP13569 1480 aa19.15■□□□□ 0.66
CUTA-211ENST00000488478 ERCC6Q03468 1493 aa19.05■□□□□ 0.64
CUTA-211ENST00000488478 THOC2Q8NI27 1593 aaKnown RBP19.05■□□□□ 0.64
CUTA-211ENST00000488478 PDS5BQ9NTI5 1447 aa19.01■□□□□ 0.63
CUTA-211ENST00000488478 FANCD2Q9BXW9 1451 aa18.99■□□□□ 0.63
CUTA-211ENST00000488478 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
CUTA-211ENST00000488478 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
CUTA-211ENST00000488478 WDR62O43379 1518 aa18.88■□□□□ 0.61
CUTA-211ENST00000488478 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
CUTA-211ENST00000488478 CUX2O14529 1486 aa18.82■□□□□ 0.6
CUTA-211ENST00000488478 DNMBPQ6XZF7 1577 aa18.76■□□□□ 0.59
CUTA-211ENST00000488478 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
CUTA-211ENST00000488478 CUX1P39880 1505 aa18.71■□□□□ 0.59
CUTA-211ENST00000488478 ABCC8Q09428 1581 aa18.69■□□□□ 0.58
CUTA-211ENST00000488478 SYNJ1O43426 1573 aa18.64■□□□□ 0.58
CUTA-211ENST00000488478 BIVM-ERCC5R4GMW8 1640 aa18.64■□□□□ 0.57
CUTA-211ENST00000488478 POLA1P09884 1462 aaPredicted RBP18.6■□□□□ 0.57
CUTA-211ENST00000488478 TOP2BQ02880 1626 aa18.6■□□□□ 0.57
CUTA-211ENST00000488478 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
CUTA-211ENST00000488478 FGD5Q6ZNL6 1462 aa18.58■□□□□ 0.57
CUTA-211ENST00000488478 WRNQ14191 1432 aaPredicted RBP eCLIP18.57■□□□□ 0.566e-6■■■□□ 16.7
CUTA-211ENST00000488478 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
CUTA-211ENST00000488478 IFT140Q96RY7 1462 aa18.53■□□□□ 0.56
CUTA-211ENST00000488478 RAD54L2Q9Y4B4 1467 aa18.51■□□□□ 0.55
CUTA-211ENST00000488478 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
CUTA-211ENST00000488478 EIF4G3O43432 1585 aaKnown RBP18.48■□□□□ 0.55
CUTA-211ENST00000488478 SOGA1O94964 1423 aa18.44■□□□□ 0.54
CUTA-211ENST00000488478 ABCA10Q8WWZ4 1543 aa18.4■□□□□ 0.54
CUTA-211ENST00000488478 ABCA5Q8WWZ7 1642 aa18.4■□□□□ 0.54
CUTA-211ENST00000488478 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
CUTA-211ENST00000488478 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.533e-9■■■■■ 30.8
CUTA-211ENST00000488478 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.53
CUTA-211ENST00000488478 GAPVD1Q14C86 1478 aa18.27■□□□□ 0.52
CUTA-211ENST00000488478 CHD1O14646 1710 aa18.27■□□□□ 0.52
CUTA-211ENST00000488478 GRIN2BQ13224 1484 aa18.23■□□□□ 0.51
CUTA-211ENST00000488478 SNAPC4Q5SXM2 1469 aa18.23■□□□□ 0.51
CUTA-211ENST00000488478 ADAMTS12P58397 1594 aa18.2■□□□□ 0.5
CUTA-211ENST00000488478 MAGI1Q96QZ7 1491 aaPredicted RBP18.19■□□□□ 0.5
CUTA-211ENST00000488478 ERICH3Q5RHP9 1530 aa18.18■□□□□ 0.5
CUTA-211ENST00000488478 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.49
CUTA-211ENST00000488478 TRIM41Q8WV44 630 aa18.14■□□□□ 0.49
CUTA-211ENST00000488478 KIF27Q86VH2 1401 aa18.14■□□□□ 0.49
CUTA-211ENST00000488478 CHIC1Q5VXU3 224 aa18.12■□□□□ 0.49
CUTA-211ENST00000488478 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
CUTA-211ENST00000488478 CUL7Q14999 1698 aa18.09■□□□□ 0.49
CUTA-211ENST00000488478 FHAD1B1AJZ9 1412 aa18.05■□□□□ 0.48
CUTA-211ENST00000488478 IGF1RP08069 1367 aa18.04■□□□□ 0.48
CUTA-211ENST00000488478 GRIN2AQ12879 1464 aa18.04■□□□□ 0.48
CUTA-211ENST00000488478 CEP170Q5SW79 1584 aa18.01■□□□□ 0.47
CUTA-211ENST00000488478 CLASP1Q7Z460 1538 aa18.01■□□□□ 0.47
CUTA-211ENST00000488478 FBLN2P98095 1184 aa17.98■□□□□ 0.47
CUTA-211ENST00000488478 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
CUTA-211ENST00000488478 NUP160Q12769 1436 aa17.96■□□□□ 0.47
CUTA-211ENST00000488478 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
CUTA-211ENST00000488478 DNAJC5Q9H3Z4 198 aa17.94■□□□□ 0.46
CUTA-211ENST00000488478 CARMIL1Q5VZK9 1371 aa17.93■□□□□ 0.46
CUTA-211ENST00000488478 EEA1Q15075 1411 aa17.9■□□□□ 0.46
CUTA-211ENST00000488478 PRXQ9BXM0 1461 aa17.9■□□□□ 0.46
CUTA-211ENST00000488478 SHROOM2Q13796 1616 aa17.88■□□□□ 0.45
CUTA-211ENST00000488478 RAPGEF2Q9Y4G8 1499 aa17.87■□□□□ 0.45
CUTA-211ENST00000488478 CTTNBP2Q8WZ74 1663 aa17.87■□□□□ 0.45
CUTA-211ENST00000488478 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
CUTA-211ENST00000488478 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms