RNA–Protein interactions for RNA: ENST00000242839.8

ATP7B-201, Transcript of ATPase copper transporting beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP7B, Length 6,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-201ENST00000242839 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
ATP7B-201ENST00000242839 EHMT2Q96KQ7 1210 aa18.64■□□□□ 0.58
ATP7B-201ENST00000242839 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
ATP7B-201ENST00000242839 PELP1Q8IZL8 1130 aaKnown RBP18.08■□□□□ 0.48
ATP7B-201ENST00000242839 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
ATP7B-201ENST00000242839 TTBK1Q5TCY1 1321 aaPredicted RBP17.97■□□□□ 0.47
ATP7B-201ENST00000242839 APLP2Q06481 763 aa17.77■□□□□ 0.44
ATP7B-201ENST00000242839 ERICH6Q7L0X2 663 aa17.72■□□□□ 0.43
ATP7B-201ENST00000242839 RANGAP1P46060 587 aaPredicted RBP17.68■□□□□ 0.42
ATP7B-201ENST00000242839 FAM9AQ8IZU1 332 aaPredicted RBP17.62■□□□□ 0.41
ATP7B-201ENST00000242839 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
ATP7B-201ENST00000242839 PCGF6Q9BYE7 350 aa17.45■□□□□ 0.38
ATP7B-201ENST00000242839 CCER1Q8TC90 406 aaPredicted RBP17.31■□□□□ 0.36
ATP7B-201ENST00000242839 MYT1Q01538 1121 aa17.28■□□□□ 0.36
ATP7B-201ENST00000242839 YTHDC1Q96MU7 727 aaKnown RBP17.25■□□□□ 0.35
ATP7B-201ENST00000242839 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
ATP7B-201ENST00000242839 NEFLP07196 543 aa17.03■□□□□ 0.32
ATP7B-201ENST00000242839 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
ATP7B-201ENST00000242839 POLR3GLQ9BT43 218 aa16.97■□□□□ 0.31
ATP7B-201ENST00000242839 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
ATP7B-201ENST00000242839 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
ATP7B-201ENST00000242839 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
ATP7B-201ENST00000242839 UBTFP17480 764 aaKnown RBP16.9■□□□□ 0.3
ATP7B-201ENST00000242839 DAXXQ9UER7 740 aaPredicted RBP16.84■□□□□ 0.29
ATP7B-201ENST00000242839 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
ATP7B-201ENST00000242839 SLC4A1APQ9BWU0 796 aaKnown RBP16.75■□□□□ 0.27
ATP7B-201ENST00000242839 ITGAEP38570 1179 aa16.74■□□□□ 0.27
ATP7B-201ENST00000242839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.71■□□□□ 0.27
ATP7B-201ENST00000242839 HNRNPUL2Q1KMD3 747 aaKnown RBP16.71■□□□□ 0.27
ATP7B-201ENST00000242839 ZEB1P37275 1124 aaPredicted RBP16.71■□□□□ 0.27
ATP7B-201ENST00000242839 NISCHQ9Y2I1 1504 aa16.68■□□□□ 0.26
ATP7B-201ENST00000242839 CLSPNQ9HAW4 1339 aa16.46■□□□□ 0.23
ATP7B-201ENST00000242839 ZNF316A6NFI3 1004 aaPredicted RBP16.45■□□□□ 0.22
ATP7B-201ENST00000242839 BCL11AQ9H165 835 aa16.42■□□□□ 0.22
ATP7B-201ENST00000242839 SLC24A1O60721 1099 aa16.32■□□□□ 0.2
ATP7B-201ENST00000242839 RTL5Q5HYW3 569 aaPredicted RBP16.27■□□□□ 0.2
ATP7B-201ENST00000242839 BCANQ96GW7 911 aa16.17■□□□□ 0.18
ATP7B-201ENST00000242839 HRCP23327 699 aa16.14■□□□□ 0.17
ATP7B-201ENST00000242839 TRIM26Q12899 539 aaPredicted RBP16.14■□□□□ 0.17
ATP7B-201ENST00000242839 TRIM52Q96A61 297 aa16.09■□□□□ 0.17
ATP7B-201ENST00000242839 FAM50AQ14320 339 aaKnown RBP16.08■□□□□ 0.17
ATP7B-201ENST00000242839 ZNF326Q5BKZ1 582 aaKnown RBP16.08■□□□□ 0.16
ATP7B-201ENST00000242839 LOC105371045A0A1W2PR82 267 aa16.07■□□□□ 0.16
ATP7B-201ENST00000242839 NEUROD1Q13562 356 aa16.07■□□□□ 0.16
ATP7B-201ENST00000242839 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
ATP7B-201ENST00000242839 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
ATP7B-201ENST00000242839 PLPPR3Q6T4P5 718 aa15.95■□□□□ 0.14
ATP7B-201ENST00000242839 DIEXFQ68CQ4 756 aaKnown RBP15.9■□□□□ 0.14
ATP7B-201ENST00000242839 FBLN2P98095 1184 aa15.84■□□□□ 0.13
ATP7B-201ENST00000242839 ARID3CA6NKF2 412 aa15.83■□□□□ 0.12
ATP7B-201ENST00000242839 NPM2Q86SE8 214 aaKnown RBP15.82■□□□□ 0.12
ATP7B-201ENST00000242839 CDK11AQ9UQ88 783 aaPredicted RBP15.79■□□□□ 0.12
ATP7B-201ENST00000242839 ANP32CO43423 234 aa15.74■□□□□ 0.11
ATP7B-201ENST00000242839 NEFMP07197 916 aa15.73■□□□□ 0.11
ATP7B-201ENST00000242839 GTF3C3Q9Y5Q9 886 aa15.7■□□□□ 0.1
ATP7B-201ENST00000242839 EIF5BO60841 1220 aaKnown RBP15.67■□□□□ 0.1
ATP7B-201ENST00000242839 ARXQ96QS3 562 aa15.62■□□□□ 0.09
ATP7B-201ENST00000242839 A0A0G2JS52 829 aa15.61■□□□□ 0.09
ATP7B-201ENST00000242839 P3H3Q8IVL6 736 aa15.6■□□□□ 0.09
ATP7B-201ENST00000242839 ZNF777Q9ULD5 760 aaPredicted RBP15.6■□□□□ 0.09
ATP7B-201ENST00000242839 HSP90AA1P07900 732 aaKnown RBP15.59■□□□□ 0.09
ATP7B-201ENST00000242839 PLEKHG5O94827 1062 aa15.59■□□□□ 0.09
ATP7B-201ENST00000242839 SCAF1Q9H7N4 1312 aaKnown RBP15.58■□□□□ 0.09
ATP7B-201ENST00000242839 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
ATP7B-201ENST00000242839 CHGAP10645 457 aaKnown RBP15.57■□□□□ 0.08
ATP7B-201ENST00000242839 ANP32AP39687 249 aaKnown RBP15.56■□□□□ 0.08
ATP7B-201ENST00000242839 SALL2Q9Y467 1007 aaPredicted RBP15.55■□□□□ 0.08
ATP7B-201ENST00000242839 SENP3Q9H4L4 574 aaPredicted RBP15.54■□□□□ 0.08
ATP7B-201ENST00000242839 STAG3Q9UJ98 1225 aa15.52■□□□□ 0.08
ATP7B-201ENST00000242839 ANP32BQ92688 251 aaKnown RBP15.52■□□□□ 0.07
ATP7B-201ENST00000242839 ESF1Q9H501 851 aaKnown RBP15.51■□□□□ 0.07
ATP7B-201ENST00000242839 ZBTB7CA1YPR0 619 aa15.47■□□□□ 0.07
ATP7B-201ENST00000242839 TULP1O00294 542 aaPredicted RBP15.44■□□□□ 0.06
ATP7B-201ENST00000242839 NBR1Q14596 966 aa15.41■□□□□ 0.06
ATP7B-201ENST00000242839 FAM9BQ8IZU0 186 aa15.36■□□□□ 0.05
ATP7B-201ENST00000242839 FKBP8Q14318 412 aa15.36■□□□□ 0.05
ATP7B-201ENST00000242839 CDK11BP21127 795 aaKnown RBP15.35■□□□□ 0.05
ATP7B-201ENST00000242839 UPF2Q9HAU5 1272 aaKnown RBP15.33■□□□□ 0.04
ATP7B-201ENST00000242839 TPRNQ4KMQ1 711 aa15.33■□□□□ 0.04
ATP7B-201ENST00000242839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.31■□□□□ 0.041e-6■■□□□ 12.8
ATP7B-201ENST00000242839 C14orf37Q86TY3 774 aa15.28■□□□□ 0.04
ATP7B-201ENST00000242839 TAOK2Q9UL54 1235 aa15.25■□□□□ 0.03
ATP7B-201ENST00000242839 HNRNPUQ00839 825 aaKnown RBP eCLIP15.25■□□□□ 0.03
ATP7B-201ENST00000242839 IRX6P78412 446 aaPredicted RBP15.22■□□□□ 0.03
ATP7B-201ENST00000242839 SENP3-EIF4A1A0A087X0R7 540 aa15.19■□□□□ 0.02
ATP7B-201ENST00000242839 NCBP3Q53F19 620 aaKnown RBP15.19■□□□□ 0.02
ATP7B-201ENST00000242839 KDM2AQ9Y2K7 1162 aa15.19■□□□□ 0.02
ATP7B-201ENST00000242839 ABCC9O60706 1549 aa15.19■□□□□ 0.02
ATP7B-201ENST00000242839 DDX10Q13206 875 aaKnown RBP15.16■□□□□ 0.02
ATP7B-201ENST00000242839 CHIC2Q9UKJ5 165 aa15.16■□□□□ 0.02
ATP7B-201ENST00000242839 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
ATP7B-201ENST00000242839 WDR43Q15061 677 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATP7B-201ENST00000242839 GLIPR1L2Q4G1C9 344 aa15.15■□□□□ 0.02
ATP7B-201ENST00000242839 CCDC136Q96JN2 1154 aa15.14■□□□□ 0.01
ATP7B-201ENST00000242839 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.12■□□□□ 0.01
ATP7B-201ENST00000242839 TMC1Q8TDI8 760 aa15.11■□□□□ 0.01
ATP7B-201ENST00000242839 TONSLQ96HA7 1378 aa15.11■□□□□ 0.01
ATP7B-201ENST00000242839 NPM1P06748 294 aaKnown RBP eCLIP15.11■□□□□ 0.01
ATP7B-201ENST00000242839 MYH16Q9H6N6 1097 aa15.1■□□□□ 0.01
ATP7B-201ENST00000242839 NCLP19338 710 aaKnown RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms