RNA–Protein interactions for RNA: ENST00000641471.1

PPT1-215, Transcript of palmitoyl-protein thioesterase 1, humanhuman

BASIC

Gene PPT1, Length 2,368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-215ENST00000641471 NISCHQ9Y2I1 1504 aa33.46■■■□□ 2.95
PPT1-215ENST00000641471 CCDC180Q9P1Z9 1646 aa28.67■■■□□ 2.18
PPT1-215ENST00000641471 ZCCHC6Q5VYS8 1495 aaKnown RBP28.32■■■□□ 2.12
PPT1-215ENST00000641471 SHROOM4Q9ULL8 1493 aa28.23■■■□□ 2.11
PPT1-215ENST00000641471 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
PPT1-215ENST00000641471 DCAF1Q9Y4B6 1507 aa27.53■■■□□ 2
PPT1-215ENST00000641471 DCAF8L2P0C7V8 631 aa27.44■■□□□ 1.98
PPT1-215ENST00000641471 CHIC1Q5VXU3 224 aa26.86■■□□□ 1.89
PPT1-215ENST00000641471 MYO15BQ96JP2 1530 aa26.84■■□□□ 1.89
PPT1-215ENST00000641471 ABCC9O60706 1549 aa26.75■■□□□ 1.87
PPT1-215ENST00000641471 SCRIBQ14160 1630 aa26.7■■□□□ 1.86
PPT1-215ENST00000641471 NACADO15069 1562 aa26.42■■□□□ 1.82
PPT1-215ENST00000641471 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
PPT1-215ENST00000641471 RB1CC1Q8TDY2 1594 aa26.17■■□□□ 1.78
PPT1-215ENST00000641471 CECR2Q9BXF3 1484 aa26.04■■□□□ 1.76
PPT1-215ENST00000641471 MROH2BQ7Z745 1585 aa25.98■■□□□ 1.75
PPT1-215ENST00000641471 LOC105371045A0A1W2PR82 267 aa25.98■■□□□ 1.75
PPT1-215ENST00000641471 WIZO95785 1651 aa25.9■■□□□ 1.74
PPT1-215ENST00000641471 HRCP23327 699 aa25.83■■□□□ 1.73
PPT1-215ENST00000641471 PCGF6Q9BYE7 350 aa25.83■■□□□ 1.73
PPT1-215ENST00000641471 UNC13AQ9UPW8 1703 aa25.79■■□□□ 1.72
PPT1-215ENST00000641471 BAZ1AQ9NRL2 1556 aaPredicted RBP25.78■■□□□ 1.72
PPT1-215ENST00000641471 TRIM41Q8WV44 630 aa25.73■■□□□ 1.71
PPT1-215ENST00000641471 EIF4G1Q04637 1599 aaKnown RBP25.61■■□□□ 1.69
PPT1-215ENST00000641471 SMARCA4P51532 1647 aa25.56■■□□□ 1.68
PPT1-215ENST00000641471 TOP2AP11388 1531 aaKnown RBP25.5■■□□□ 1.67
PPT1-215ENST00000641471 FAM9AQ8IZU1 332 aaPredicted RBP25.46■■□□□ 1.67
PPT1-215ENST00000641471 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
PPT1-215ENST00000641471 SMARCA2P51531 1590 aa25.36■■□□□ 1.65
PPT1-215ENST00000641471 BICRAQ9NZM4 1560 aa25.33■■□□□ 1.65
PPT1-215ENST00000641471 CCDC88BA6NC98 1476 aa25.3■■□□□ 1.64
PPT1-215ENST00000641471 PPARGC1BQ86YN6 1023 aaKnown RBP25.26■■□□□ 1.63
PPT1-215ENST00000641471 ABCC8Q09428 1581 aa25.22■■□□□ 1.63
PPT1-215ENST00000641471 EHMT2Q96KQ7 1210 aa25.19■■□□□ 1.62
PPT1-215ENST00000641471 PEG3Q9GZU2 1588 aa25.11■■□□□ 1.61
PPT1-215ENST00000641471 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
PPT1-215ENST00000641471 SOGA1O94964 1423 aa24.89■■□□□ 1.58
PPT1-215ENST00000641471 ATAD2BQ9ULI0 1458 aa24.85■■□□□ 1.57
PPT1-215ENST00000641471 ZEB1P37275 1124 aaPredicted RBP24.82■■□□□ 1.56
PPT1-215ENST00000641471 EEA1Q15075 1411 aa24.81■■□□□ 1.56
PPT1-215ENST00000641471 RUSC2Q8N2Y8 1516 aa24.8■■□□□ 1.56
PPT1-215ENST00000641471 WRNQ14191 1432 aaPredicted RBP eCLIP24.77■■□□□ 1.56
PPT1-215ENST00000641471 BAZ1BQ9UIG0 1483 aaKnown RBP24.76■■□□□ 1.55
PPT1-215ENST00000641471 CEP162Q5TB80 1403 aa24.75■■□□□ 1.55
PPT1-215ENST00000641471 SYNJ1O43426 1573 aa24.75■■□□□ 1.55
PPT1-215ENST00000641471 TNIKQ9UKE5 1360 aa24.72■■□□□ 1.55
PPT1-215ENST00000641471 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
PPT1-215ENST00000641471 GOLGA3Q08378 1498 aa24.63■■□□□ 1.53
PPT1-215ENST00000641471 KIF21BO75037 1637 aa24.58■■□□□ 1.53
PPT1-215ENST00000641471 CEP164Q9UPV0 1460 aa24.5■■□□□ 1.51
PPT1-215ENST00000641471 UBTFP17480 764 aaKnown RBP24.5■■□□□ 1.51
PPT1-215ENST00000641471 TOP2BQ02880 1626 aa24.48■■□□□ 1.51
PPT1-215ENST00000641471 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
PPT1-215ENST00000641471 BIVM-ERCC5R4GMW8 1640 aa24.45■■□□□ 1.5
PPT1-215ENST00000641471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.39■■□□□ 1.49
PPT1-215ENST00000641471 TTBK1Q5TCY1 1321 aaPredicted RBP24.38■■□□□ 1.49
PPT1-215ENST00000641471 NCAPD3P42695 1498 aa24.38■■□□□ 1.49
PPT1-215ENST00000641471 RAPGEF2Q9Y4G8 1499 aa24.32■■□□□ 1.48
PPT1-215ENST00000641471 CCER1Q8TC90 406 aaPredicted RBP24.31■■□□□ 1.48
PPT1-215ENST00000641471 CLIP1P30622 1438 aa24.3■■□□□ 1.48
PPT1-215ENST00000641471 PRDM2Q13029 1718 aa24.22■■□□□ 1.47
PPT1-215ENST00000641471 CUX1P39880 1505 aa24.22■■□□□ 1.47
PPT1-215ENST00000641471 VPS8Q8N3P4 1428 aa24.21■■□□□ 1.47
PPT1-215ENST00000641471 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
PPT1-215ENST00000641471 CFTRP13569 1480 aa24.16■■□□□ 1.46
PPT1-215ENST00000641471 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
PPT1-215ENST00000641471 KIF27Q86VH2 1401 aa24■■□□□ 1.43
PPT1-215ENST00000641471 ARAP1Q96P48 1450 aa24■■□□□ 1.43
PPT1-215ENST00000641471 RANGAP1P46060 587 aaPredicted RBP23.98■■□□□ 1.43
PPT1-215ENST00000641471 APLP2Q06481 763 aa23.92■■□□□ 1.42
PPT1-215ENST00000641471 HNRNPUL2Q1KMD3 747 aaKnown RBP23.89■■□□□ 1.42
PPT1-215ENST00000641471 CC2D2AQ9P2K1 1620 aa23.87■■□□□ 1.41
PPT1-215ENST00000641471 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
PPT1-215ENST00000641471 CUX2O14529 1486 aa23.8■■□□□ 1.4
PPT1-215ENST00000641471 ARHGAP35Q9NRY4 1499 aa23.79■■□□□ 1.4
PPT1-215ENST00000641471 DIEXFQ68CQ4 756 aaKnown RBP23.78■■□□□ 1.4
PPT1-215ENST00000641471 FGD5Q6ZNL6 1462 aa23.77■■□□□ 1.4
PPT1-215ENST00000641471 IGF1RP08069 1367 aa23.73■■□□□ 1.39
PPT1-215ENST00000641471 KANK4Q5T7N3 995 aaPredicted RBP23.71■■□□□ 1.39
PPT1-215ENST00000641471 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
PPT1-215ENST00000641471 ZNF316A6NFI3 1004 aaPredicted RBP23.67■■□□□ 1.38
PPT1-215ENST00000641471 FANCD2Q9BXW9 1451 aa23.66■■□□□ 1.38
PPT1-215ENST00000641471 RRBP1Q9P2E9 1410 aaKnown RBP23.65■■□□□ 1.38
PPT1-215ENST00000641471 DNMBPQ6XZF7 1577 aa23.62■■□□□ 1.37
PPT1-215ENST00000641471 CARMIL1Q5VZK9 1371 aa23.62■■□□□ 1.37
PPT1-215ENST00000641471 TIAM1Q13009 1591 aa23.56■■□□□ 1.36
PPT1-215ENST00000641471 DHX57Q6P158 1386 aaKnown RBP23.55■■□□□ 1.36
PPT1-215ENST00000641471 TOPBP1Q92547 1522 aa23.54■■□□□ 1.36
PPT1-215ENST00000641471 ACIN1Q9UKV3 1341 aaKnown RBP23.53■■□□□ 1.36
PPT1-215ENST00000641471 MAP3K1Q13233 1512 aa23.53■■□□□ 1.36
PPT1-215ENST00000641471 NESP48681 1621 aa23.52■■□□□ 1.36
PPT1-215ENST00000641471 ABCA10Q8WWZ4 1543 aa23.52■■□□□ 1.36
PPT1-215ENST00000641471 POLA1P09884 1462 aaPredicted RBP23.51■■□□□ 1.35
PPT1-215ENST00000641471 RAD54L2Q9Y4B4 1467 aa23.51■■□□□ 1.35
PPT1-215ENST00000641471 NEUROD1Q13562 356 aa23.5■■□□□ 1.35
PPT1-215ENST00000641471 CCNB3Q8WWL7 1395 aa23.5■■□□□ 1.35
PPT1-215ENST00000641471 CFAP43Q8NDM7 1665 aa23.49■■□□□ 1.35
PPT1-215ENST00000641471 CLSPNQ9HAW4 1339 aa23.48■■□□□ 1.35
PPT1-215ENST00000641471 WDR97A6NE52 1622 aa23.47■■□□□ 1.35
PPT1-215ENST00000641471 CUL7Q14999 1698 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms