RNA–Protein interactions for RNA: ENST00000487637.1

CUTA-209, Transcript of cutA divalent cation tolerance homolog, humanhuman

TSL 2

Gene CUTA, Length 1,378 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-209ENST00000487637 NISCHQ9Y2I1 1504 aa23.01■■□□□ 1.27
CUTA-209ENST00000487637 CCDC180Q9P1Z9 1646 aa19.89■□□□□ 0.77
CUTA-209ENST00000487637 ABCC9O60706 1549 aa19.81■□□□□ 0.76
CUTA-209ENST00000487637 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
CUTA-209ENST00000487637 DCAF1Q9Y4B6 1507 aa19.16■□□□□ 0.66
CUTA-209ENST00000487637 DNAJC5BQ9UF47 199 aa19.06■□□□□ 0.64
CUTA-209ENST00000487637 SHROOM4Q9ULL8 1493 aa18.98■□□□□ 0.63
CUTA-209ENST00000487637 MYO15BQ96JP2 1530 aa18.68■□□□□ 0.58
CUTA-209ENST00000487637 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
CUTA-209ENST00000487637 SUPT5HO00267 1087 aaKnown RBP18.61■□□□□ 0.57
CUTA-209ENST00000487637 UNC13AQ9UPW8 1703 aa18.49■□□□□ 0.55
CUTA-209ENST00000487637 DCAF8L2P0C7V8 631 aa18.42■□□□□ 0.54
CUTA-209ENST00000487637 NACADO15069 1562 aa18.42■□□□□ 0.54
CUTA-209ENST00000487637 CHIC1Q5VXU3 224 aa18.32■□□□□ 0.52
CUTA-209ENST00000487637 PABPN1Q86U42 306 aaKnown RBP eCLIP18.29■□□□□ 0.52
CUTA-209ENST00000487637 BICRAQ9NZM4 1560 aa18.26■□□□□ 0.51
CUTA-209ENST00000487637 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
CUTA-209ENST00000487637 RSF1Q96T23 1441 aaPredicted RBP18.06■□□□□ 0.48
CUTA-209ENST00000487637 CC2D2AQ9P2K1 1620 aa17.95■□□□□ 0.46
CUTA-209ENST00000487637 CECR2Q9BXF3 1484 aa17.88■□□□□ 0.45
CUTA-209ENST00000487637 DNAJC5Q9H3Z4 198 aa17.79■□□□□ 0.44
CUTA-209ENST00000487637 EIF4G1Q04637 1599 aaKnown RBP17.78■□□□□ 0.44
CUTA-209ENST00000487637 BAZ1AQ9NRL2 1556 aaPredicted RBP17.75■□□□□ 0.43
CUTA-209ENST00000487637 MROH2BQ7Z745 1585 aa17.75■□□□□ 0.43
CUTA-209ENST00000487637 WIZO95785 1651 aa17.67■□□□□ 0.42
CUTA-209ENST00000487637 HRCP23327 699 aa17.66■□□□□ 0.42
CUTA-209ENST00000487637 SMARCA4P51532 1647 aa17.57■□□□□ 0.4
CUTA-209ENST00000487637 TOP2AP11388 1531 aaKnown RBP17.56■□□□□ 0.4
CUTA-209ENST00000487637 TRIM41Q8WV44 630 aa17.53■□□□□ 0.4
CUTA-209ENST00000487637 LOC105371045A0A1W2PR82 267 aa17.52■□□□□ 0.39
CUTA-209ENST00000487637 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
CUTA-209ENST00000487637 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
CUTA-209ENST00000487637 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
CUTA-209ENST00000487637 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
CUTA-209ENST00000487637 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
CUTA-209ENST00000487637 CUX2O14529 1486 aa17.29■□□□□ 0.36
CUTA-209ENST00000487637 EEA1Q15075 1411 aa17.22■□□□□ 0.35
CUTA-209ENST00000487637 ZEB1P37275 1124 aaPredicted RBP17.18■□□□□ 0.34
CUTA-209ENST00000487637 ABCC8Q09428 1581 aa17.13■□□□□ 0.33
CUTA-209ENST00000487637 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.336e-6■■■□□ 16.7
CUTA-209ENST00000487637 FAM9AQ8IZU1 332 aaPredicted RBP17.1■□□□□ 0.33
CUTA-209ENST00000487637 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
CUTA-209ENST00000487637 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
CUTA-209ENST00000487637 TNIKQ9UKE5 1360 aa17.02■□□□□ 0.31
CUTA-209ENST00000487637 NCAPD3P42695 1498 aa16.99■□□□□ 0.31
CUTA-209ENST00000487637 KIF21BO75037 1637 aa16.97■□□□□ 0.31
CUTA-209ENST00000487637 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
CUTA-209ENST00000487637 PPARGC1BQ86YN6 1023 aaKnown RBP16.96■□□□□ 0.31
CUTA-209ENST00000487637 GOLGA3Q08378 1498 aa16.94■□□□□ 0.3
CUTA-209ENST00000487637 THOC2Q8NI27 1593 aaKnown RBP16.93■□□□□ 0.3
CUTA-209ENST00000487637 NESP48681 1621 aa16.93■□□□□ 0.3
CUTA-209ENST00000487637 CEP162Q5TB80 1403 aa16.93■□□□□ 0.3
CUTA-209ENST00000487637 SOGA1O94964 1423 aa16.92■□□□□ 0.3
CUTA-209ENST00000487637 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
CUTA-209ENST00000487637 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
CUTA-209ENST00000487637 CSRNP3Q8WYN3 585 aa16.89■□□□□ 0.29
CUTA-209ENST00000487637 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
CUTA-209ENST00000487637 BIVM-ERCC5R4GMW8 1640 aa16.87■□□□□ 0.29
CUTA-209ENST00000487637 TOP2BQ02880 1626 aa16.85■□□□□ 0.29
CUTA-209ENST00000487637 RUSC2Q8N2Y8 1516 aa16.82■□□□□ 0.28
CUTA-209ENST00000487637 KIF21AQ7Z4S6 1674 aa16.79■□□□□ 0.28
CUTA-209ENST00000487637 PRDM2Q13029 1718 aa16.78■□□□□ 0.28
CUTA-209ENST00000487637 ERICH3Q5RHP9 1530 aa16.72■□□□□ 0.27
CUTA-209ENST00000487637 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
CUTA-209ENST00000487637 EHMT2Q96KQ7 1210 aa16.71■□□□□ 0.27
CUTA-209ENST00000487637 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
CUTA-209ENST00000487637 CLIP1P30622 1438 aa16.63■□□□□ 0.25
CUTA-209ENST00000487637 VPS8Q8N3P4 1428 aa16.63■□□□□ 0.25
CUTA-209ENST00000487637 CFTRP13569 1480 aa16.62■□□□□ 0.25
CUTA-209ENST00000487637 PRXQ9BXM0 1461 aa16.6■□□□□ 0.25
CUTA-209ENST00000487637 RAPGEF2Q9Y4G8 1499 aa16.58■□□□□ 0.25
CUTA-209ENST00000487637 CUX1P39880 1505 aa16.57■□□□□ 0.24
CUTA-209ENST00000487637 PDS5BQ9NTI5 1447 aa16.54■□□□□ 0.24
CUTA-209ENST00000487637 WDR62O43379 1518 aa16.53■□□□□ 0.24
CUTA-209ENST00000487637 CCER1Q8TC90 406 aaPredicted RBP16.52■□□□□ 0.24
CUTA-209ENST00000487637 KIF27Q86VH2 1401 aa16.49■□□□□ 0.23
CUTA-209ENST00000487637 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
CUTA-209ENST00000487637 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
CUTA-209ENST00000487637 ARAP1Q96P48 1450 aa16.42■□□□□ 0.22
CUTA-209ENST00000487637 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
CUTA-209ENST00000487637 APLP2Q06481 763 aa16.36■□□□□ 0.21
CUTA-209ENST00000487637 MAP3K1Q13233 1512 aa16.34■□□□□ 0.21
CUTA-209ENST00000487637 RIMBP3CA6NJZ7 1639 aa16.33■□□□□ 0.21
CUTA-209ENST00000487637 RIMBP3BA6NNM3 1639 aa16.33■□□□□ 0.21
CUTA-209ENST00000487637 RIMBP3Q9UFD9 1639 aa16.33■□□□□ 0.21
CUTA-209ENST00000487637 CLSPNQ9HAW4 1339 aa16.32■□□□□ 0.2
CUTA-209ENST00000487637 OSCARQ8IYS5 282 aa16.29■□□□□ 0.2
CUTA-209ENST00000487637 ARHGAP35Q9NRY4 1499 aa16.29■□□□□ 0.2
CUTA-209ENST00000487637 RRBP1Q9P2E9 1410 aaKnown RBP16.29■□□□□ 0.2
CUTA-209ENST00000487637 DNMBPQ6XZF7 1577 aa16.27■□□□□ 0.19
CUTA-209ENST00000487637 FGD5Q6ZNL6 1462 aa16.26■□□□□ 0.19
CUTA-209ENST00000487637 FANCD2Q9BXW9 1451 aa16.25■□□□□ 0.19
CUTA-209ENST00000487637 IGF1RP08069 1367 aa16.24■□□□□ 0.19
CUTA-209ENST00000487637 TTBK1Q5TCY1 1321 aaPredicted RBP16.23■□□□□ 0.19
CUTA-209ENST00000487637 DIEXFQ68CQ4 756 aaKnown RBP16.22■□□□□ 0.19
CUTA-209ENST00000487637 CUL7Q14999 1698 aa16.21■□□□□ 0.19
CUTA-209ENST00000487637 ZNF316A6NFI3 1004 aaPredicted RBP16.21■□□□□ 0.19
CUTA-209ENST00000487637 URB2Q14146 1524 aaKnown RBP16.2■□□□□ 0.18
CUTA-209ENST00000487637 CFAP43Q8NDM7 1665 aa16.2■□□□□ 0.18
CUTA-209ENST00000487637 ABCA10Q8WWZ4 1543 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms