RNA–Protein interactions for RNA: ENST00000374692.7

TMEM38B-202, Transcript of transmembrane protein 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-202ENST00000374692 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
TMEM38B-202ENST00000374692 DCAF8L2P0C7V8 631 aa22.15■■□□□ 1.14
TMEM38B-202ENST00000374692 SHROOM4Q9ULL8 1493 aa21.98■■□□□ 1.11
TMEM38B-202ENST00000374692 SUPT5HO00267 1087 aaKnown RBP21.45■■□□□ 1.02
TMEM38B-202ENST00000374692 ZCCHC6Q5VYS8 1495 aaKnown RBP20.6■□□□□ 0.89
TMEM38B-202ENST00000374692 ABCC9O60706 1549 aa20.58■□□□□ 0.88
TMEM38B-202ENST00000374692 CCDC180Q9P1Z9 1646 aa20.52■□□□□ 0.88
TMEM38B-202ENST00000374692 EHMT2Q96KQ7 1210 aa20.35■□□□□ 0.85
TMEM38B-202ENST00000374692 SCRIBQ14160 1630 aa20.08■□□□□ 0.81
TMEM38B-202ENST00000374692 FAM9AQ8IZU1 332 aaPredicted RBP20.05■□□□□ 0.8
TMEM38B-202ENST00000374692 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
TMEM38B-202ENST00000374692 PABPN1Q86U42 306 aaKnown RBP eCLIP19.99■□□□□ 0.79
TMEM38B-202ENST00000374692 LOC105371045A0A1W2PR82 267 aa19.9■□□□□ 0.78
TMEM38B-202ENST00000374692 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
TMEM38B-202ENST00000374692 TRIM41Q8WV44 630 aa19.67■□□□□ 0.74
TMEM38B-202ENST00000374692 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
TMEM38B-202ENST00000374692 CECR2Q9BXF3 1484 aa19.62■□□□□ 0.73
TMEM38B-202ENST00000374692 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
TMEM38B-202ENST00000374692 RSF1Q96T23 1441 aaPredicted RBP19.55■□□□□ 0.72
TMEM38B-202ENST00000374692 PPARGC1BQ86YN6 1023 aaKnown RBP19.5■□□□□ 0.71
TMEM38B-202ENST00000374692 TTBK1Q5TCY1 1321 aaPredicted RBP19.49■□□□□ 0.71
TMEM38B-202ENST00000374692 NACADO15069 1562 aa19.36■□□□□ 0.69
TMEM38B-202ENST00000374692 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.68
TMEM38B-202ENST00000374692 MROH2BQ7Z745 1585 aa19.33■□□□□ 0.68
TMEM38B-202ENST00000374692 RB1CC1Q8TDY2 1594 aa19.3■□□□□ 0.68
TMEM38B-202ENST00000374692 WIZO95785 1651 aa19.18■□□□□ 0.66
TMEM38B-202ENST00000374692 UBTFP17480 764 aaKnown RBP19■□□□□ 0.63
TMEM38B-202ENST00000374692 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
TMEM38B-202ENST00000374692 ABCC8Q09428 1581 aa18.88■□□□□ 0.61
TMEM38B-202ENST00000374692 CCDC88BA6NC98 1476 aa18.84■□□□□ 0.61
TMEM38B-202ENST00000374692 UNC13AQ9UPW8 1703 aa18.76■□□□□ 0.59
TMEM38B-202ENST00000374692 HRCP23327 699 aa18.76■□□□□ 0.59
TMEM38B-202ENST00000374692 TRIM26Q12899 539 aaPredicted RBP18.75■□□□□ 0.59
TMEM38B-202ENST00000374692 SMARCA4P51532 1647 aa18.75■□□□□ 0.59
TMEM38B-202ENST00000374692 SOGA1O94964 1423 aa18.71■□□□□ 0.59
TMEM38B-202ENST00000374692 BICRAQ9NZM4 1560 aa18.7■□□□□ 0.58
TMEM38B-202ENST00000374692 RUSC2Q8N2Y8 1516 aa18.63■□□□□ 0.57
TMEM38B-202ENST00000374692 BAZ1BQ9UIG0 1483 aaKnown RBP18.63■□□□□ 0.57
TMEM38B-202ENST00000374692 CSRNP3Q8WYN3 585 aa18.62■□□□□ 0.57
TMEM38B-202ENST00000374692 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.6■□□□□ 0.57
TMEM38B-202ENST00000374692 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
TMEM38B-202ENST00000374692 SMARCA2P51531 1590 aa18.56■□□□□ 0.56
TMEM38B-202ENST00000374692 ATAD2BQ9ULI0 1458 aa18.55■□□□□ 0.56
TMEM38B-202ENST00000374692 ATP1B4Q9UN42 357 aaPredicted RBP18.52■□□□□ 0.56
TMEM38B-202ENST00000374692 WRNQ14191 1432 aaPredicted RBP eCLIP18.5■□□□□ 0.55
TMEM38B-202ENST00000374692 HNRNPUL2Q1KMD3 747 aaKnown RBP18.47■□□□□ 0.55
TMEM38B-202ENST00000374692 DNAJC5BQ9UF47 199 aa18.47■□□□□ 0.55
TMEM38B-202ENST00000374692 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
TMEM38B-202ENST00000374692 APLP2Q06481 763 aa18.43■□□□□ 0.54
TMEM38B-202ENST00000374692 P3H3Q8IVL6 736 aa18.39■□□□□ 0.53
TMEM38B-202ENST00000374692 ITGAEP38570 1179 aa18.37■□□□□ 0.53
TMEM38B-202ENST00000374692 CEP162Q5TB80 1403 aa18.33■□□□□ 0.53
TMEM38B-202ENST00000374692 EIF4G1Q04637 1599 aaKnown RBP18.29■□□□□ 0.52
TMEM38B-202ENST00000374692 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
TMEM38B-202ENST00000374692 ARID3CA6NKF2 412 aa18.19■□□□□ 0.5
TMEM38B-202ENST00000374692 RAPGEF2Q9Y4G8 1499 aa18.15■□□□□ 0.5
TMEM38B-202ENST00000374692 CLIP1P30622 1438 aa18.13■□□□□ 0.49
TMEM38B-202ENST00000374692 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
TMEM38B-202ENST00000374692 TNIKQ9UKE5 1360 aa18.11■□□□□ 0.49
TMEM38B-202ENST00000374692 NESP48681 1621 aa18.09■□□□□ 0.49
TMEM38B-202ENST00000374692 NCAPD3P42695 1498 aa18.07■□□□□ 0.48
TMEM38B-202ENST00000374692 CC2D2AQ9P2K1 1620 aa18.02■□□□□ 0.47
TMEM38B-202ENST00000374692 CUX2O14529 1486 aa18.02■□□□□ 0.47
TMEM38B-202ENST00000374692 KANK4Q5T7N3 995 aaPredicted RBP18.01■□□□□ 0.47
TMEM38B-202ENST00000374692 CADPSQ9ULU8 1353 aa18■□□□□ 0.47
TMEM38B-202ENST00000374692 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
TMEM38B-202ENST00000374692 PEG3Q9GZU2 1588 aa17.99■□□□□ 0.47
TMEM38B-202ENST00000374692 ZEB1P37275 1124 aaPredicted RBP17.98■□□□□ 0.47
TMEM38B-202ENST00000374692 EEA1Q15075 1411 aa17.97■□□□□ 0.47
TMEM38B-202ENST00000374692 FBLN2P98095 1184 aa17.97■□□□□ 0.47
TMEM38B-202ENST00000374692 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
TMEM38B-202ENST00000374692 CUX1P39880 1505 aa17.94■□□□□ 0.46
TMEM38B-202ENST00000374692 KIF27Q86VH2 1401 aa17.94■□□□□ 0.46
TMEM38B-202ENST00000374692 FAM50AQ14320 339 aaKnown RBP17.93■□□□□ 0.46
TMEM38B-202ENST00000374692 RAD54L2Q9Y4B4 1467 aa17.93■□□□□ 0.46
TMEM38B-202ENST00000374692 CFTRP13569 1480 aa17.89■□□□□ 0.45
TMEM38B-202ENST00000374692 FANCD2Q9BXW9 1451 aa17.86■□□□□ 0.45
TMEM38B-202ENST00000374692 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
TMEM38B-202ENST00000374692 CARMIL1Q5VZK9 1371 aa17.84■□□□□ 0.45
TMEM38B-202ENST00000374692 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.45
TMEM38B-202ENST00000374692 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
TMEM38B-202ENST00000374692 IGF1RP08069 1367 aa17.79■□□□□ 0.44
TMEM38B-202ENST00000374692 TOP2BQ02880 1626 aa17.79■□□□□ 0.44
TMEM38B-202ENST00000374692 VPS8Q8N3P4 1428 aa17.78■□□□□ 0.44
TMEM38B-202ENST00000374692 NEUROD1Q13562 356 aa17.72■□□□□ 0.43
TMEM38B-202ENST00000374692 ARAP1Q96P48 1450 aa17.71■□□□□ 0.42
TMEM38B-202ENST00000374692 KIF21BO75037 1637 aa17.7■□□□□ 0.42
TMEM38B-202ENST00000374692 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
TMEM38B-202ENST00000374692 FHOD3Q2V2M9 1422 aa17.68■□□□□ 0.42
TMEM38B-202ENST00000374692 PRXQ9BXM0 1461 aa17.65■□□□□ 0.42
TMEM38B-202ENST00000374692 CHIC2Q9UKJ5 165 aa17.63■□□□□ 0.41
TMEM38B-202ENST00000374692 POLA1P09884 1462 aaPredicted RBP17.61■□□□□ 0.41
TMEM38B-202ENST00000374692 AQRO60306 1485 aaKnown RBP eCLIP17.6■□□□□ 0.41
TMEM38B-202ENST00000374692 HIRIP3Q9BW71 556 aaPredicted RBP17.59■□□□□ 0.41
TMEM38B-202ENST00000374692 TOPBP1Q92547 1522 aa17.58■□□□□ 0.41
TMEM38B-202ENST00000374692 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
TMEM38B-202ENST00000374692 PDS5BQ9NTI5 1447 aa17.56■□□□□ 0.4
TMEM38B-202ENST00000374692 BIVM-ERCC5R4GMW8 1640 aa17.54■□□□□ 0.4
TMEM38B-202ENST00000374692 ERCC6Q03468 1493 aa17.54■□□□□ 0.4
TMEM38B-202ENST00000374692 URB2Q14146 1524 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms