RNA–Protein interactions for RNA: ENST00000641319.1

PPT1-213, Transcript of palmitoyl-protein thioesterase 1, humanhuman

BASIC

Gene PPT1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-213ENST00000641319 NISCHQ9Y2I1 1504 aa27.84■■■□□ 2.05
PPT1-213ENST00000641319 SHROOM4Q9ULL8 1493 aa24.17■■□□□ 1.46
PPT1-213ENST00000641319 SUPT5HO00267 1087 aaKnown RBP23.95■■□□□ 1.43
PPT1-213ENST00000641319 HRCP23327 699 aa23.87■■□□□ 1.41
PPT1-213ENST00000641319 MYO15BQ96JP2 1530 aa23.71■■□□□ 1.39
PPT1-213ENST00000641319 ZCCHC6Q5VYS8 1495 aaKnown RBP23.68■■□□□ 1.38
PPT1-213ENST00000641319 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
PPT1-213ENST00000641319 CCDC180Q9P1Z9 1646 aa23.47■■□□□ 1.35
PPT1-213ENST00000641319 PCGF6Q9BYE7 350 aa23.45■■□□□ 1.34
PPT1-213ENST00000641319 PPARGC1BQ86YN6 1023 aaKnown RBP23.28■■□□□ 1.32
PPT1-213ENST00000641319 DCAF1Q9Y4B6 1507 aa23.23■■□□□ 1.31
PPT1-213ENST00000641319 LOC105371045A0A1W2PR82 267 aa22.89■■□□□ 1.26
PPT1-213ENST00000641319 DCAF8L2P0C7V8 631 aa22.88■■□□□ 1.25
PPT1-213ENST00000641319 TRIM26Q12899 539 aaPredicted RBP22.86■■□□□ 1.25
PPT1-213ENST00000641319 PELP1Q8IZL8 1130 aaKnown RBP22.65■■□□□ 1.22
PPT1-213ENST00000641319 ZEB1P37275 1124 aaPredicted RBP22.63■■□□□ 1.21
PPT1-213ENST00000641319 ABCC9O60706 1549 aa22.51■■□□□ 1.19
PPT1-213ENST00000641319 SCAF1Q9H7N4 1312 aaKnown RBP22.38■■□□□ 1.17
PPT1-213ENST00000641319 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
PPT1-213ENST00000641319 RSF1Q96T23 1441 aaPredicted RBP22.23■■□□□ 1.15
PPT1-213ENST00000641319 RB1CC1Q8TDY2 1594 aa22.19■■□□□ 1.14
PPT1-213ENST00000641319 FAM9AQ8IZU1 332 aaPredicted RBP22.12■■□□□ 1.13
PPT1-213ENST00000641319 SCRIBQ14160 1630 aa22.1■■□□□ 1.13
PPT1-213ENST00000641319 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
PPT1-213ENST00000641319 EHMT2Q96KQ7 1210 aa21.94■■□□□ 1.1
PPT1-213ENST00000641319 NEUROD1Q13562 356 aa21.87■■□□□ 1.09
PPT1-213ENST00000641319 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.83■■□□□ 1.09
PPT1-213ENST00000641319 CCER1Q8TC90 406 aaPredicted RBP21.82■■□□□ 1.08
PPT1-213ENST00000641319 CENPBP07199 599 aaPredicted RBP21.75■■□□□ 1.07
PPT1-213ENST00000641319 DIEXFQ68CQ4 756 aaKnown RBP21.73■■□□□ 1.07
PPT1-213ENST00000641319 GTF3C3Q9Y5Q9 886 aa21.72■■□□□ 1.07
PPT1-213ENST00000641319 MYT1Q01538 1121 aa21.72■■□□□ 1.07
PPT1-213ENST00000641319 MROH2BQ7Z745 1585 aa21.69■■□□□ 1.06
PPT1-213ENST00000641319 CECR2Q9BXF3 1484 aa21.68■■□□□ 1.06
PPT1-213ENST00000641319 WIZO95785 1651 aa21.67■■□□□ 1.06
PPT1-213ENST00000641319 EIF4G1Q04637 1599 aaKnown RBP21.63■■□□□ 1.05
PPT1-213ENST00000641319 BAZ1AQ9NRL2 1556 aaPredicted RBP21.57■■□□□ 1.04
PPT1-213ENST00000641319 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
PPT1-213ENST00000641319 NACADO15069 1562 aa21.5■■□□□ 1.03
PPT1-213ENST00000641319 CEP162Q5TB80 1403 aa21.43■■□□□ 1.02
PPT1-213ENST00000641319 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
PPT1-213ENST00000641319 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
PPT1-213ENST00000641319 ABCC8Q09428 1581 aa21.38■■□□□ 1.01
PPT1-213ENST00000641319 CCDC88BA6NC98 1476 aa21.35■■□□□ 1.01
PPT1-213ENST00000641319 TNIKQ9UKE5 1360 aa21.32■■□□□ 1
PPT1-213ENST00000641319 TOP2AP11388 1531 aaKnown RBP21.28■■□□□ 1
PPT1-213ENST00000641319 YTHDC1Q96MU7 727 aaKnown RBP21.26■□□□□ 0.99
PPT1-213ENST00000641319 SOGA1O94964 1423 aa21.23■□□□□ 0.99
PPT1-213ENST00000641319 EEA1Q15075 1411 aa21.22■□□□□ 0.99
PPT1-213ENST00000641319 SMARCA2P51531 1590 aa21.21■□□□□ 0.99
PPT1-213ENST00000641319 MIER1Q8N108 512 aa21.17■□□□□ 0.98
PPT1-213ENST00000641319 GOLGA3Q08378 1498 aa21.14■□□□□ 0.97
PPT1-213ENST00000641319 SMARCA4P51532 1647 aa21.14■□□□□ 0.97
PPT1-213ENST00000641319 CSRNP3Q8WYN3 585 aa21.12■□□□□ 0.97
PPT1-213ENST00000641319 UBTFP17480 764 aaKnown RBP21.12■□□□□ 0.97
PPT1-213ENST00000641319 RUSC2Q8N2Y8 1516 aa21.12■□□□□ 0.97
PPT1-213ENST00000641319 HNRNPUL2Q1KMD3 747 aaKnown RBP21.01■□□□□ 0.95
PPT1-213ENST00000641319 KIF21BO75037 1637 aa20.98■□□□□ 0.95
PPT1-213ENST00000641319 CEP164Q9UPV0 1460 aa20.94■□□□□ 0.94
PPT1-213ENST00000641319 UNC13AQ9UPW8 1703 aa20.92■□□□□ 0.94
PPT1-213ENST00000641319 CLIP1P30622 1438 aa20.89■□□□□ 0.94
PPT1-213ENST00000641319 VPS8Q8N3P4 1428 aa20.89■□□□□ 0.93
PPT1-213ENST00000641319 CLSPNQ9HAW4 1339 aa20.89■□□□□ 0.93
PPT1-213ENST00000641319 SYNJ1O43426 1573 aa20.83■□□□□ 0.92
PPT1-213ENST00000641319 BAZ1BQ9UIG0 1483 aaKnown RBP20.81■□□□□ 0.92
PPT1-213ENST00000641319 APLP2Q06481 763 aa20.79■□□□□ 0.92
PPT1-213ENST00000641319 SUPT16HQ9Y5B9 1047 aaKnown RBP20.78■□□□□ 0.92
PPT1-213ENST00000641319 DHX57Q6P158 1386 aaKnown RBP20.71■□□□□ 0.91
PPT1-213ENST00000641319 RAPGEF2Q9Y4G8 1499 aa20.7■□□□□ 0.9
PPT1-213ENST00000641319 PEG3Q9GZU2 1588 aa20.66■□□□□ 0.9
PPT1-213ENST00000641319 TSHZ2Q9NRE2 1034 aa20.6■□□□□ 0.89
PPT1-213ENST00000641319 RANGAP1P46060 587 aaPredicted RBP20.56■□□□□ 0.88
PPT1-213ENST00000641319 ANP32EQ9BTT0 268 aa20.53■□□□□ 0.88
PPT1-213ENST00000641319 ARAP1Q96P48 1450 aa20.52■□□□□ 0.87
PPT1-213ENST00000641319 TOP2BQ02880 1626 aa20.51■□□□□ 0.87
PPT1-213ENST00000641319 ERICH3Q5RHP9 1530 aa20.51■□□□□ 0.87
PPT1-213ENST00000641319 RRBP1Q9P2E9 1410 aaKnown RBP20.49■□□□□ 0.87
PPT1-213ENST00000641319 CUX2O14529 1486 aa20.48■□□□□ 0.87
PPT1-213ENST00000641319 BICRAQ9NZM4 1560 aa20.48■□□□□ 0.87
PPT1-213ENST00000641319 BIVM-ERCC5R4GMW8 1640 aa20.46■□□□□ 0.87
PPT1-213ENST00000641319 KANK4Q5T7N3 995 aaPredicted RBP20.43■□□□□ 0.86
PPT1-213ENST00000641319 PRXQ9BXM0 1461 aa20.41■□□□□ 0.86
PPT1-213ENST00000641319 ATAD2BQ9ULI0 1458 aa20.38■□□□□ 0.85
PPT1-213ENST00000641319 CCNB3Q8WWL7 1395 aa20.36■□□□□ 0.85
PPT1-213ENST00000641319 KCNH8Q96L42 1107 aa20.35■□□□□ 0.85
PPT1-213ENST00000641319 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
PPT1-213ENST00000641319 MAPKBP1O60336 1514 aa20.32■□□□□ 0.84
PPT1-213ENST00000641319 BCANQ96GW7 911 aa20.3■□□□□ 0.84
PPT1-213ENST00000641319 FKBP8Q14318 412 aa20.27■□□□□ 0.84
PPT1-213ENST00000641319 RAB3GAP2Q9H2M9 1393 aa20.26■□□□□ 0.83
PPT1-213ENST00000641319 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
PPT1-213ENST00000641319 ITGAEP38570 1179 aa20.23■□□□□ 0.83
PPT1-213ENST00000641319 ARHGAP35Q9NRY4 1499 aa20.23■□□□□ 0.83
PPT1-213ENST00000641319 WDR97A6NE52 1622 aa20.22■□□□□ 0.83
PPT1-213ENST00000641319 DDX10Q13206 875 aaKnown RBP20.17■□□□□ 0.82
PPT1-213ENST00000641319 KIF27Q86VH2 1401 aa20.17■□□□□ 0.82
PPT1-213ENST00000641319 NEFLP07196 543 aa20.16■□□□□ 0.82
PPT1-213ENST00000641319 TIAM1Q13009 1591 aa20.16■□□□□ 0.82
PPT1-213ENST00000641319 CUX1P39880 1505 aa20.16■□□□□ 0.82
PPT1-213ENST00000641319 SETD5Q9C0A6 1442 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms