RNA–Protein interactions for RNA: ENST00000530704.6

PPT1-210, Transcript of palmitoyl-protein thioesterase 1, humanhuman

TSL 1 (best)

Gene PPT1, Length 2,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-210ENST00000530704 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
PPT1-210ENST00000530704 HRCP23327 699 aa22.42■■□□□ 1.18
PPT1-210ENST00000530704 CCDC180Q9P1Z9 1646 aa22.35■■□□□ 1.17
PPT1-210ENST00000530704 SHROOM4Q9ULL8 1493 aa22.32■■□□□ 1.16
PPT1-210ENST00000530704 ZCCHC6Q5VYS8 1495 aaKnown RBP22.17■■□□□ 1.14
PPT1-210ENST00000530704 SUPT5HO00267 1087 aaKnown RBP22.15■■□□□ 1.14
PPT1-210ENST00000530704 MYO15BQ96JP2 1530 aa22■■□□□ 1.11
PPT1-210ENST00000530704 PCGF6Q9BYE7 350 aa21.91■■□□□ 1.1
PPT1-210ENST00000530704 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
PPT1-210ENST00000530704 PPARGC1BQ86YN6 1023 aaKnown RBP21.85■■□□□ 1.09
PPT1-210ENST00000530704 DCAF8L2P0C7V8 631 aa21.8■■□□□ 1.08
PPT1-210ENST00000530704 DCAF1Q9Y4B6 1507 aa21.6■■□□□ 1.05
PPT1-210ENST00000530704 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
PPT1-210ENST00000530704 TRIM26Q12899 539 aaPredicted RBP21.33■■□□□ 1
PPT1-210ENST00000530704 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
PPT1-210ENST00000530704 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
PPT1-210ENST00000530704 SCAF1Q9H7N4 1312 aaKnown RBP21.11■□□□□ 0.97
PPT1-210ENST00000530704 SCRIBQ14160 1630 aa20.97■□□□□ 0.95
PPT1-210ENST00000530704 ABCC9O60706 1549 aa20.89■□□□□ 0.94
PPT1-210ENST00000530704 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
PPT1-210ENST00000530704 NACADO15069 1562 aa20.69■□□□□ 0.9
PPT1-210ENST00000530704 MYT1Q01538 1121 aa20.66■□□□□ 0.9
PPT1-210ENST00000530704 ACIN1Q9UKV3 1341 aaKnown RBP20.65■□□□□ 0.9
PPT1-210ENST00000530704 NEUROD1Q13562 356 aa20.56■□□□□ 0.88
PPT1-210ENST00000530704 TRIM41Q8WV44 630 aa20.56■□□□□ 0.88
PPT1-210ENST00000530704 CECR2Q9BXF3 1484 aa20.52■□□□□ 0.88
PPT1-210ENST00000530704 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
PPT1-210ENST00000530704 FAM9AQ8IZU1 332 aaPredicted RBP20.45■□□□□ 0.86
PPT1-210ENST00000530704 GTF3C3Q9Y5Q9 886 aa20.43■□□□□ 0.86
PPT1-210ENST00000530704 MROH2BQ7Z745 1585 aa20.43■□□□□ 0.86
PPT1-210ENST00000530704 CENPBP07199 599 aaPredicted RBP20.38■□□□□ 0.85
PPT1-210ENST00000530704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.34■□□□□ 0.85
PPT1-210ENST00000530704 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
PPT1-210ENST00000530704 WIZO95785 1651 aa20.32■□□□□ 0.84
PPT1-210ENST00000530704 CCER1Q8TC90 406 aaPredicted RBP20.31■□□□□ 0.84
PPT1-210ENST00000530704 EHMT2Q96KQ7 1210 aa20.27■□□□□ 0.84
PPT1-210ENST00000530704 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
PPT1-210ENST00000530704 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
PPT1-210ENST00000530704 SMARCA4P51532 1647 aa20.02■□□□□ 0.8
PPT1-210ENST00000530704 ZNF316A6NFI3 1004 aaPredicted RBP19.99■□□□□ 0.79
PPT1-210ENST00000530704 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
PPT1-210ENST00000530704 WRNQ14191 1432 aaPredicted RBP eCLIP19.97■□□□□ 0.79
PPT1-210ENST00000530704 TOP2AP11388 1531 aaKnown RBP19.95■□□□□ 0.78
PPT1-210ENST00000530704 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
PPT1-210ENST00000530704 BICRAQ9NZM4 1560 aa19.89■□□□□ 0.78
PPT1-210ENST00000530704 CCDC88BA6NC98 1476 aa19.89■□□□□ 0.77
PPT1-210ENST00000530704 YTHDC1Q96MU7 727 aaKnown RBP19.88■□□□□ 0.77
PPT1-210ENST00000530704 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
PPT1-210ENST00000530704 ABCC8Q09428 1581 aa19.82■□□□□ 0.76
PPT1-210ENST00000530704 MIER1Q8N108 512 aa19.81■□□□□ 0.76
PPT1-210ENST00000530704 TTBK1Q5TCY1 1321 aaPredicted RBP19.8■□□□□ 0.76
PPT1-210ENST00000530704 CEP162Q5TB80 1403 aa19.78■□□□□ 0.76
PPT1-210ENST00000530704 TNIKQ9UKE5 1360 aa19.7■□□□□ 0.74
PPT1-210ENST00000530704 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
PPT1-210ENST00000530704 PEG3Q9GZU2 1588 aa19.62■□□□□ 0.73
PPT1-210ENST00000530704 SOGA1O94964 1423 aa19.6■□□□□ 0.73
PPT1-210ENST00000530704 CLSPNQ9HAW4 1339 aa19.58■□□□□ 0.72
PPT1-210ENST00000530704 RUSC2Q8N2Y8 1516 aa19.54■□□□□ 0.72
PPT1-210ENST00000530704 ATAD2BQ9ULI0 1458 aa19.53■□□□□ 0.72
PPT1-210ENST00000530704 EEA1Q15075 1411 aa19.52■□□□□ 0.72
PPT1-210ENST00000530704 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
PPT1-210ENST00000530704 SUPT16HQ9Y5B9 1047 aaKnown RBP19.51■□□□□ 0.71
PPT1-210ENST00000530704 HNRNPUL2Q1KMD3 747 aaKnown RBP19.49■□□□□ 0.71
PPT1-210ENST00000530704 UBTFP17480 764 aaKnown RBP19.48■□□□□ 0.71
PPT1-210ENST00000530704 BAZ1BQ9UIG0 1483 aaKnown RBP19.45■□□□□ 0.7
PPT1-210ENST00000530704 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
PPT1-210ENST00000530704 TSHZ2Q9NRE2 1034 aa19.41■□□□□ 0.7
PPT1-210ENST00000530704 SYNJ1O43426 1573 aa19.4■□□□□ 0.7
PPT1-210ENST00000530704 ANP32EQ9BTT0 268 aa19.4■□□□□ 0.7
PPT1-210ENST00000530704 VPS8Q8N3P4 1428 aa19.27■□□□□ 0.68
PPT1-210ENST00000530704 CLIP1P30622 1438 aa19.26■□□□□ 0.67
PPT1-210ENST00000530704 CEP164Q9UPV0 1460 aa19.26■□□□□ 0.67
PPT1-210ENST00000530704 BCL11AQ9H165 835 aa19.25■□□□□ 0.67
PPT1-210ENST00000530704 KIF21BO75037 1637 aa19.23■□□□□ 0.67
PPT1-210ENST00000530704 DHX57Q6P158 1386 aaKnown RBP19.22■□□□□ 0.67
PPT1-210ENST00000530704 APLP2Q06481 763 aa19.18■□□□□ 0.66
PPT1-210ENST00000530704 NCAPD3P42695 1498 aa19.16■□□□□ 0.66
PPT1-210ENST00000530704 TOP2BQ02880 1626 aa19.15■□□□□ 0.66
PPT1-210ENST00000530704 HMGXB3Q12766 1538 aa19.13■□□□□ 0.65
PPT1-210ENST00000530704 RAPGEF2Q9Y4G8 1499 aa19.12■□□□□ 0.65
PPT1-210ENST00000530704 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
PPT1-210ENST00000530704 RANGAP1P46060 587 aaPredicted RBP19.04■□□□□ 0.64
PPT1-210ENST00000530704 KCNH8Q96L42 1107 aa19.03■□□□□ 0.64
PPT1-210ENST00000530704 CUX1P39880 1505 aa19.01■□□□□ 0.63
PPT1-210ENST00000530704 BCANQ96GW7 911 aa19■□□□□ 0.63
PPT1-210ENST00000530704 CFTRP13569 1480 aa18.98■□□□□ 0.63
PPT1-210ENST00000530704 FKBP8Q14318 412 aa18.97■□□□□ 0.63
PPT1-210ENST00000530704 CUX2O14529 1486 aa18.96■□□□□ 0.63
PPT1-210ENST00000530704 RBM19Q9Y4C8 960 aaKnown RBP18.95■□□□□ 0.62
PPT1-210ENST00000530704 RRBP1Q9P2E9 1410 aaKnown RBP18.94■□□□□ 0.62
PPT1-210ENST00000530704 PRXQ9BXM0 1461 aa18.93■□□□□ 0.62
PPT1-210ENST00000530704 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
PPT1-210ENST00000530704 ERICH3Q5RHP9 1530 aa18.89■□□□□ 0.61
PPT1-210ENST00000530704 ARAP1Q96P48 1450 aa18.88■□□□□ 0.61
PPT1-210ENST00000530704 KIF27Q86VH2 1401 aa18.85■□□□□ 0.61
PPT1-210ENST00000530704 PRDM2Q13029 1718 aa18.83■□□□□ 0.6
PPT1-210ENST00000530704 NEFLP07196 543 aa18.83■□□□□ 0.6
PPT1-210ENST00000530704 DNAJC5Q9H3Z4 198 aa18.82■□□□□ 0.6
PPT1-210ENST00000530704 CCNB3Q8WWL7 1395 aa18.81■□□□□ 0.6
PPT1-210ENST00000530704 MAPKBP1O60336 1514 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms