RNA–Protein interactions for RNA: ENST00000245932.10

VASP-201, Transcript of vasodilator stimulated phosphoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VASP, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASP-201ENST00000245932 NISCHQ9Y2I1 1504 aa35.51■■■■□ 3.28
VASP-201ENST00000245932 CCDC180Q9P1Z9 1646 aa30.57■■■□□ 2.48
VASP-201ENST00000245932 ZCCHC6Q5VYS8 1495 aaKnown RBP29.84■■■□□ 2.37
VASP-201ENST00000245932 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
VASP-201ENST00000245932 SHROOM4Q9ULL8 1493 aa29.64■■■□□ 2.33
VASP-201ENST00000245932 DCAF1Q9Y4B6 1507 aa29.14■■■□□ 2.25
VASP-201ENST00000245932 ABCC9O60706 1549 aa29.12■■■□□ 2.25
VASP-201ENST00000245932 SUPT5HO00267 1087 aaKnown RBP28.68■■■□□ 2.18
VASP-201ENST00000245932 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
VASP-201ENST00000245932 NACADO15069 1562 aa28.51■■■□□ 2.16
VASP-201ENST00000245932 SCRIBQ14160 1630 aa28.51■■■□□ 2.15
VASP-201ENST00000245932 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
VASP-201ENST00000245932 RSF1Q96T23 1441 aaPredicted RBP27.77■■■□□ 2.04
VASP-201ENST00000245932 CECR2Q9BXF3 1484 aa27.76■■■□□ 2.03
VASP-201ENST00000245932 UNC13AQ9UPW8 1703 aa27.72■■■□□ 2.03
VASP-201ENST00000245932 PABPN1Q86U42 306 aaKnown RBP eCLIP27.7■■■□□ 2.03
VASP-201ENST00000245932 MROH2BQ7Z745 1585 aa27.55■■■□□ 2
VASP-201ENST00000245932 CHIC1Q5VXU3 224 aa27.53■■■□□ 2
VASP-201ENST00000245932 BICRAQ9NZM4 1560 aa27.47■■□□□ 1.99
VASP-201ENST00000245932 WIZO95785 1651 aa27.35■■□□□ 1.97
VASP-201ENST00000245932 BAZ1AQ9NRL2 1556 aaPredicted RBP27.34■■□□□ 1.97
VASP-201ENST00000245932 SMARCA4P51532 1647 aa27.2■■□□□ 1.95
VASP-201ENST00000245932 HRCP23327 699 aa27.07■■□□□ 1.92
VASP-201ENST00000245932 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
VASP-201ENST00000245932 CCDC88BA6NC98 1476 aa26.81■■□□□ 1.88
VASP-201ENST00000245932 LOC105371045A0A1W2PR82 267 aa26.79■■□□□ 1.88
VASP-201ENST00000245932 TRIM41Q8WV44 630 aa26.79■■□□□ 1.88
VASP-201ENST00000245932 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
VASP-201ENST00000245932 PEG3Q9GZU2 1588 aa26.73■■□□□ 1.87
VASP-201ENST00000245932 SMARCA2P51531 1590 aa26.72■■□□□ 1.87
VASP-201ENST00000245932 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
VASP-201ENST00000245932 BAZ1BQ9UIG0 1483 aaKnown RBP26.63■■□□□ 1.85
VASP-201ENST00000245932 FAM9AQ8IZU1 332 aaPredicted RBP26.53■■□□□ 1.84
VASP-201ENST00000245932 PCGF6Q9BYE7 350 aa26.45■■□□□ 1.82
VASP-201ENST00000245932 ABCC8Q09428 1581 aa26.41■■□□□ 1.82
VASP-201ENST00000245932 NCAPD3P42695 1498 aa26.41■■□□□ 1.82
VASP-201ENST00000245932 EHMT2Q96KQ7 1210 aa26.33■■□□□ 1.81
VASP-201ENST00000245932 HMGXB3Q12766 1538 aa26.29■■□□□ 1.8
VASP-201ENST00000245932 PPARGC1BQ86YN6 1023 aaKnown RBP26.29■■□□□ 1.8
VASP-201ENST00000245932 CC2D2AQ9P2K1 1620 aa26.2■■□□□ 1.79
VASP-201ENST00000245932 PELP1Q8IZL8 1130 aaKnown RBP26.16■■□□□ 1.78
VASP-201ENST00000245932 WRNQ14191 1432 aaPredicted RBP eCLIP26.11■■□□□ 1.77
VASP-201ENST00000245932 SOGA1O94964 1423 aa26.02■■□□□ 1.76
VASP-201ENST00000245932 SYNJ1O43426 1573 aa25.97■■□□□ 1.75
VASP-201ENST00000245932 CFTRP13569 1480 aa25.94■■□□□ 1.74
VASP-201ENST00000245932 RUSC2Q8N2Y8 1516 aa25.94■■□□□ 1.74
VASP-201ENST00000245932 TRIM26Q12899 539 aaPredicted RBP25.9■■□□□ 1.74
VASP-201ENST00000245932 DNAJC5BQ9UF47 199 aa25.86■■□□□ 1.73
VASP-201ENST00000245932 CADPSQ9ULU8 1353 aa25.85■■□□□ 1.73
VASP-201ENST00000245932 CSRNP3Q8WYN3 585 aa25.83■■□□□ 1.73
VASP-201ENST00000245932 TOP2BQ02880 1626 aa25.74■■□□□ 1.71
VASP-201ENST00000245932 EEA1Q15075 1411 aa25.72■■□□□ 1.71
VASP-201ENST00000245932 CUX1P39880 1505 aa25.7■■□□□ 1.71
VASP-201ENST00000245932 NESP48681 1621 aa25.67■■□□□ 1.7
VASP-201ENST00000245932 UBTFP17480 764 aaKnown RBP25.66■■□□□ 1.7
VASP-201ENST00000245932 BIVM-ERCC5R4GMW8 1640 aa25.64■■□□□ 1.7
VASP-201ENST00000245932 ZEB1P37275 1124 aaPredicted RBP25.62■■□□□ 1.69
VASP-201ENST00000245932 PRDM2Q13029 1718 aa25.58■■□□□ 1.69
VASP-201ENST00000245932 FANCD2Q9BXW9 1451 aa25.57■■□□□ 1.68
VASP-201ENST00000245932 TNIKQ9UKE5 1360 aa25.5■■□□□ 1.67
VASP-201ENST00000245932 GOLGA3Q08378 1498 aa25.5■■□□□ 1.67
VASP-201ENST00000245932 SCAF1Q9H7N4 1312 aaKnown RBP25.48■■□□□ 1.67
VASP-201ENST00000245932 CEP162Q5TB80 1403 aa25.46■■□□□ 1.67
VASP-201ENST00000245932 CEP164Q9UPV0 1460 aa25.46■■□□□ 1.67
VASP-201ENST00000245932 RAPGEF2Q9Y4G8 1499 aa25.42■■□□□ 1.66
VASP-201ENST00000245932 RANGAP1P46060 587 aaPredicted RBP25.4■■□□□ 1.66
VASP-201ENST00000245932 KIF27Q86VH2 1401 aa25.4■■□□□ 1.66
VASP-201ENST00000245932 FGD5Q6ZNL6 1462 aa25.39■■□□□ 1.66
VASP-201ENST00000245932 LAMC3Q9Y6N6 1575 aa25.39■■□□□ 1.66
VASP-201ENST00000245932 KIF21BO75037 1637 aa25.37■■□□□ 1.65
VASP-201ENST00000245932 TTBK1Q5TCY1 1321 aaPredicted RBP25.35■■□□□ 1.65
VASP-201ENST00000245932 CUX2O14529 1486 aa25.34■■□□□ 1.65
VASP-201ENST00000245932 PDS5BQ9NTI5 1447 aa25.3■■□□□ 1.64
VASP-201ENST00000245932 TOPBP1Q92547 1522 aa25.29■■□□□ 1.64
VASP-201ENST00000245932 PRXQ9BXM0 1461 aa25.27■■□□□ 1.64
VASP-201ENST00000245932 RAD54L2Q9Y4B4 1467 aa25.27■■□□□ 1.64
VASP-201ENST00000245932 DNMBPQ6XZF7 1577 aa25.26■■□□□ 1.63
VASP-201ENST00000245932 URB2Q14146 1524 aaKnown RBP25.24■■□□□ 1.63
VASP-201ENST00000245932 IGF1RP08069 1367 aa25.23■■□□□ 1.63
VASP-201ENST00000245932 POLA1P09884 1462 aaPredicted RBP25.23■■□□□ 1.63
VASP-201ENST00000245932 CLIP1P30622 1438 aa25.2■■□□□ 1.62
VASP-201ENST00000245932 MYT1Q01538 1121 aa25.18■■□□□ 1.62
VASP-201ENST00000245932 KIF21AQ7Z4S6 1674 aa25.17■■□□□ 1.62
VASP-201ENST00000245932 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.61
VASP-201ENST00000245932 CARMIL1Q5VZK9 1371 aa25.1■■□□□ 1.61
VASP-201ENST00000245932 ABCA10Q8WWZ4 1543 aa25.08■■□□□ 1.61
VASP-201ENST00000245932 TDRD9Q8NDG6 1382 aaKnown RBP25.06■■□□□ 1.6
VASP-201ENST00000245932 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.06■■□□□ 1.6
VASP-201ENST00000245932 ACIN1Q9UKV3 1341 aaKnown RBP24.97■■□□□ 1.59
VASP-201ENST00000245932 VPS8Q8N3P4 1428 aa24.95■■□□□ 1.58
VASP-201ENST00000245932 MRC2Q9UBG0 1479 aa24.93■■□□□ 1.58
VASP-201ENST00000245932 CCER1Q8TC90 406 aaPredicted RBP24.91■■□□□ 1.58
VASP-201ENST00000245932 APLP2Q06481 763 aa24.88■■□□□ 1.57
VASP-201ENST00000245932 ERCC6Q03468 1493 aa24.88■■□□□ 1.57
VASP-201ENST00000245932 GAPVD1Q14C86 1478 aa24.88■■□□□ 1.57
VASP-201ENST00000245932 ARAP1Q96P48 1450 aa24.87■■□□□ 1.57
VASP-201ENST00000245932 WDR97A6NE52 1622 aa24.86■■□□□ 1.57
VASP-201ENST00000245932 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.56
VASP-201ENST00000245932 ARHGAP35Q9NRY4 1499 aa24.82■■□□□ 1.56
VASP-201ENST00000245932 AQRO60306 1485 aaKnown RBP eCLIP24.81■■□□□ 1.563e-8■■■■■ 48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms