RNA–Protein interactions for RNA: ENST00000641236.1

PPT1-212, Transcript of palmitoyl-protein thioesterase 1, humanhuman

Gene PPT1, Length 2,481 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-212ENST00000641236 NISCHQ9Y2I1 1504 aa30.82■■■□□ 2.52
PPT1-212ENST00000641236 CCDC180Q9P1Z9 1646 aa26.4■■□□□ 1.82
PPT1-212ENST00000641236 ZCCHC6Q5VYS8 1495 aaKnown RBP26.09■■□□□ 1.77
PPT1-212ENST00000641236 SHROOM4Q9ULL8 1493 aa25.76■■□□□ 1.71
PPT1-212ENST00000641236 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
PPT1-212ENST00000641236 SUPT5HO00267 1087 aaKnown RBP25.27■■□□□ 1.64
PPT1-212ENST00000641236 DCAF8L2P0C7V8 631 aa25.11■■□□□ 1.61
PPT1-212ENST00000641236 MYO15BQ96JP2 1530 aa24.87■■□□□ 1.57
PPT1-212ENST00000641236 CHIC1Q5VXU3 224 aa24.72■■□□□ 1.55
PPT1-212ENST00000641236 ABCC9O60706 1549 aa24.58■■□□□ 1.52
PPT1-212ENST00000641236 SCRIBQ14160 1630 aa24.4■■□□□ 1.5
PPT1-212ENST00000641236 NACADO15069 1562 aa24.4■■□□□ 1.5
PPT1-212ENST00000641236 RSF1Q96T23 1441 aaPredicted RBP24.29■■□□□ 1.48
PPT1-212ENST00000641236 RB1CC1Q8TDY2 1594 aa24.09■■□□□ 1.45
PPT1-212ENST00000641236 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
PPT1-212ENST00000641236 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
PPT1-212ENST00000641236 HRCP23327 699 aa23.83■■□□□ 1.4
PPT1-212ENST00000641236 LOC105371045A0A1W2PR82 267 aa23.79■■□□□ 1.4
PPT1-212ENST00000641236 TRIM41Q8WV44 630 aa23.72■■□□□ 1.39
PPT1-212ENST00000641236 BAZ1AQ9NRL2 1556 aaPredicted RBP23.72■■□□□ 1.39
PPT1-212ENST00000641236 PCGF6Q9BYE7 350 aa23.71■■□□□ 1.39
PPT1-212ENST00000641236 WIZO95785 1651 aa23.67■■□□□ 1.38
PPT1-212ENST00000641236 TRIM26Q12899 539 aaPredicted RBP23.5■■□□□ 1.35
PPT1-212ENST00000641236 EIF4G1Q04637 1599 aaKnown RBP23.48■■□□□ 1.35
PPT1-212ENST00000641236 UNC13AQ9UPW8 1703 aa23.48■■□□□ 1.35
PPT1-212ENST00000641236 SMARCA4P51532 1647 aa23.47■■□□□ 1.35
PPT1-212ENST00000641236 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
PPT1-212ENST00000641236 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
PPT1-212ENST00000641236 FAM9AQ8IZU1 332 aaPredicted RBP23.26■■□□□ 1.31
PPT1-212ENST00000641236 CCDC88BA6NC98 1476 aa23.26■■□□□ 1.31
PPT1-212ENST00000641236 BICRAQ9NZM4 1560 aa23.22■■□□□ 1.31
PPT1-212ENST00000641236 PEG3Q9GZU2 1588 aa23.19■■□□□ 1.3
PPT1-212ENST00000641236 ZEB1P37275 1124 aaPredicted RBP23.08■■□□□ 1.29
PPT1-212ENST00000641236 PPARGC1BQ86YN6 1023 aaKnown RBP23.05■■□□□ 1.28
PPT1-212ENST00000641236 ABCC8Q09428 1581 aa23.04■■□□□ 1.28
PPT1-212ENST00000641236 EEA1Q15075 1411 aa23.02■■□□□ 1.28
PPT1-212ENST00000641236 PABPN1Q86U42 306 aaKnown RBP eCLIP22.96■■□□□ 1.27
PPT1-212ENST00000641236 WRNQ14191 1432 aaPredicted RBP eCLIP22.89■■□□□ 1.25
PPT1-212ENST00000641236 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
PPT1-212ENST00000641236 EHMT2Q96KQ7 1210 aa22.87■■□□□ 1.25
PPT1-212ENST00000641236 TNIKQ9UKE5 1360 aa22.85■■□□□ 1.25
PPT1-212ENST00000641236 SOGA1O94964 1423 aa22.83■■□□□ 1.25
PPT1-212ENST00000641236 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
PPT1-212ENST00000641236 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
PPT1-212ENST00000641236 CEP162Q5TB80 1403 aa22.77■■□□□ 1.24
PPT1-212ENST00000641236 GOLGA3Q08378 1498 aa22.71■■□□□ 1.23
PPT1-212ENST00000641236 RUSC2Q8N2Y8 1516 aa22.68■■□□□ 1.22
PPT1-212ENST00000641236 SYNJ1O43426 1573 aa22.67■■□□□ 1.22
PPT1-212ENST00000641236 KIF21BO75037 1637 aa22.64■■□□□ 1.21
PPT1-212ENST00000641236 CEP164Q9UPV0 1460 aa22.62■■□□□ 1.21
PPT1-212ENST00000641236 HMGXB3Q12766 1538 aa22.56■■□□□ 1.2
PPT1-212ENST00000641236 UBTFP17480 764 aaKnown RBP22.55■■□□□ 1.2
PPT1-212ENST00000641236 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
PPT1-212ENST00000641236 TOP2BQ02880 1626 aa22.52■■□□□ 1.2
PPT1-212ENST00000641236 BIVM-ERCC5R4GMW8 1640 aa22.46■■□□□ 1.19
PPT1-212ENST00000641236 CCER1Q8TC90 406 aaPredicted RBP22.38■■□□□ 1.17
PPT1-212ENST00000641236 CLIP1P30622 1438 aa22.38■■□□□ 1.17
PPT1-212ENST00000641236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.36■■□□□ 1.17
PPT1-212ENST00000641236 VPS8Q8N3P4 1428 aa22.33■■□□□ 1.17
PPT1-212ENST00000641236 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.17
PPT1-212ENST00000641236 ERICH3Q5RHP9 1530 aa22.32■■□□□ 1.16
PPT1-212ENST00000641236 CFTRP13569 1480 aa22.3■■□□□ 1.16
PPT1-212ENST00000641236 PRXQ9BXM0 1461 aa22.27■■□□□ 1.16
PPT1-212ENST00000641236 CUX1P39880 1505 aa22.22■■□□□ 1.15
PPT1-212ENST00000641236 PRDM2Q13029 1718 aa22.18■■□□□ 1.14
PPT1-212ENST00000641236 KIF27Q86VH2 1401 aa22.17■■□□□ 1.14
PPT1-212ENST00000641236 TTBK1Q5TCY1 1321 aaPredicted RBP22.16■■□□□ 1.14
PPT1-212ENST00000641236 APLP2Q06481 763 aa22.12■■□□□ 1.13
PPT1-212ENST00000641236 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
PPT1-212ENST00000641236 CADPSQ9ULU8 1353 aa22.02■■□□□ 1.12
PPT1-212ENST00000641236 DIEXFQ68CQ4 756 aaKnown RBP21.93■■□□□ 1.1
PPT1-212ENST00000641236 HNRNPUL2Q1KMD3 747 aaKnown RBP21.9■■□□□ 1.1
PPT1-212ENST00000641236 IGF1RP08069 1367 aa21.89■■□□□ 1.09
PPT1-212ENST00000641236 CUX2O14529 1486 aa21.87■■□□□ 1.09
PPT1-212ENST00000641236 CLSPNQ9HAW4 1339 aa21.87■■□□□ 1.09
PPT1-212ENST00000641236 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
PPT1-212ENST00000641236 CC2D2AQ9P2K1 1620 aa21.86■■□□□ 1.09
PPT1-212ENST00000641236 ZNF316A6NFI3 1004 aaPredicted RBP21.86■■□□□ 1.09
PPT1-212ENST00000641236 RANGAP1P46060 587 aaPredicted RBP21.85■■□□□ 1.09
PPT1-212ENST00000641236 RRBP1Q9P2E9 1410 aaKnown RBP21.84■■□□□ 1.09
PPT1-212ENST00000641236 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.09
PPT1-212ENST00000641236 MAP3K1Q13233 1512 aa21.82■■□□□ 1.08
PPT1-212ENST00000641236 CARMIL1Q5VZK9 1371 aa21.78■■□□□ 1.08
PPT1-212ENST00000641236 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.07
PPT1-212ENST00000641236 FANCD2Q9BXW9 1451 aa21.76■■□□□ 1.07
PPT1-212ENST00000641236 SCAF1Q9H7N4 1312 aaKnown RBP21.75■■□□□ 1.07
PPT1-212ENST00000641236 DNMBPQ6XZF7 1577 aa21.73■■□□□ 1.07
PPT1-212ENST00000641236 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
PPT1-212ENST00000641236 ABCA10Q8WWZ4 1543 aa21.69■■□□□ 1.06
PPT1-212ENST00000641236 DHX57Q6P158 1386 aaKnown RBP21.68■■□□□ 1.06
PPT1-212ENST00000641236 CCNB3Q8WWL7 1395 aa21.68■■□□□ 1.06
PPT1-212ENST00000641236 CENPBP07199 599 aaPredicted RBP21.67■■□□□ 1.06
PPT1-212ENST00000641236 TIAM1Q13009 1591 aa21.66■■□□□ 1.06
PPT1-212ENST00000641236 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
PPT1-212ENST00000641236 TOPBP1Q92547 1522 aa21.63■■□□□ 1.05
PPT1-212ENST00000641236 POLA1P09884 1462 aaPredicted RBP21.61■■□□□ 1.05
PPT1-212ENST00000641236 CUL7Q14999 1698 aa21.59■■□□□ 1.05
PPT1-212ENST00000641236 LAMC3Q9Y6N6 1575 aa21.59■■□□□ 1.05
PPT1-212ENST00000641236 NEUROD1Q13562 356 aa21.58■■□□□ 1.05
PPT1-212ENST00000641236 EFCAB5A4FU69 1503 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms