RNA–Protein interactions for RNA: ENST00000488034.5

CUTA-210, Transcript of cutA divalent cation tolerance homolog, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CUTA, Length 769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-210ENST00000488034 NISCHQ9Y2I1 1504 aa45.58■■■■■ 4.89
CUTA-210ENST00000488034 ABCC9O60706 1549 aa41.85■■■■■ 4.29
CUTA-210ENST00000488034 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
CUTA-210ENST00000488034 DNAJC5BQ9UF47 199 aa39.86■■■■□ 3.97
CUTA-210ENST00000488034 RB1CC1Q8TDY2 1594 aa39.49■■■■□ 3.91
CUTA-210ENST00000488034 NACADO15069 1562 aa39.06■■■■□ 3.84
CUTA-210ENST00000488034 PABPN1Q86U42 306 aaKnown RBP eCLIP38.85■■■■□ 3.81
CUTA-210ENST00000488034 DCAF8L2P0C7V8 631 aa38.67■■■■□ 3.78
CUTA-210ENST00000488034 UNC13AQ9UPW8 1703 aa38.61■■■■□ 3.77
CUTA-210ENST00000488034 BICRAQ9NZM4 1560 aa38.44■■■■□ 3.74
CUTA-210ENST00000488034 MYO15BQ96JP2 1530 aa38.31■■■■□ 3.72
CUTA-210ENST00000488034 SHROOM4Q9ULL8 1493 aa37.79■■■■□ 3.64
CUTA-210ENST00000488034 CC2D2AQ9P2K1 1620 aa37.76■■■■□ 3.63
CUTA-210ENST00000488034 CECR2Q9BXF3 1484 aa37.75■■■■□ 3.63
CUTA-210ENST00000488034 ZCCHC6Q5VYS8 1495 aaKnown RBP37.67■■■■□ 3.62
CUTA-210ENST00000488034 DCAF1Q9Y4B6 1507 aa37.59■■■■□ 3.61
CUTA-210ENST00000488034 EIF4G1Q04637 1599 aaKnown RBP37.53■■■■□ 3.6
CUTA-210ENST00000488034 SCRIBQ14160 1630 aa37.52■■■■□ 3.6
CUTA-210ENST00000488034 DNAJC5Q9H3Z4 198 aa37■■■■□ 3.51
CUTA-210ENST00000488034 CUX2O14529 1486 aa36.31■■■■□ 3.4
CUTA-210ENST00000488034 ERCC6Q03468 1493 aa36.14■■■■□ 3.38
CUTA-210ENST00000488034 NCAPD3P42695 1498 aa36.09■■■■□ 3.37
CUTA-210ENST00000488034 ATAD2BQ9ULI0 1458 aa35.91■■■■□ 3.34
CUTA-210ENST00000488034 NESP48681 1621 aa35.79■■■■□ 3.32
CUTA-210ENST00000488034 HMGXB3Q12766 1538 aa35.78■■■■□ 3.32
CUTA-210ENST00000488034 SMARCA2P51531 1590 aa35.73■■■■□ 3.31
CUTA-210ENST00000488034 SMARCA4P51532 1647 aa35.71■■■■□ 3.31
CUTA-210ENST00000488034 THOC2Q8NI27 1593 aaKnown RBP35.56■■■■□ 3.28
CUTA-210ENST00000488034 BAZ1BQ9UIG0 1483 aaKnown RBP35.51■■■■□ 3.28
CUTA-210ENST00000488034 BAZ1AQ9NRL2 1556 aaPredicted RBP35.41■■■■□ 3.26
CUTA-210ENST00000488034 LAMC3Q9Y6N6 1575 aa35.37■■■■□ 3.25
CUTA-210ENST00000488034 PEG3Q9GZU2 1588 aa35.36■■■■□ 3.25
CUTA-210ENST00000488034 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
CUTA-210ENST00000488034 PDS5BQ9NTI5 1447 aa35.16■■■■□ 3.22
CUTA-210ENST00000488034 MROH2BQ7Z745 1585 aa35.15■■■■□ 3.22
CUTA-210ENST00000488034 TRIM41Q8WV44 630 aa35.12■■■■□ 3.21
CUTA-210ENST00000488034 CADPSQ9ULU8 1353 aa34.95■■■■□ 3.19
CUTA-210ENST00000488034 MRC2Q9UBG0 1479 aa34.95■■■■□ 3.19
CUTA-210ENST00000488034 WDR62O43379 1518 aa34.91■■■■□ 3.18
CUTA-210ENST00000488034 WIZO95785 1651 aa34.67■■■■□ 3.14
CUTA-210ENST00000488034 CEP164Q9UPV0 1460 aa34.67■■■■□ 3.14
CUTA-210ENST00000488034 FANCD2Q9BXW9 1451 aa34.58■■■■□ 3.13
CUTA-210ENST00000488034 OSCARQ8IYS5 282 aa34.47■■■■□ 3.11
CUTA-210ENST00000488034 CFTRP13569 1480 aa34.44■■■■□ 3.1
CUTA-210ENST00000488034 URB2Q14146 1524 aaKnown RBP34.37■■■■□ 3.09
CUTA-210ENST00000488034 TOP2AP11388 1531 aaKnown RBP34.2■■■■□ 3.06
CUTA-210ENST00000488034 RIMBP3CA6NJZ7 1639 aa34.19■■■■□ 3.06
CUTA-210ENST00000488034 RIMBP3BA6NNM3 1639 aa34.19■■■■□ 3.06
CUTA-210ENST00000488034 RIMBP3Q9UFD9 1639 aa34.19■■■■□ 3.06
CUTA-210ENST00000488034 RSF1Q96T23 1441 aaPredicted RBP34.16■■■■□ 3.06
CUTA-210ENST00000488034 ZNF608Q9ULD9 1512 aaPredicted RBP34.07■■■■□ 3.04
CUTA-210ENST00000488034 ARHGEF11O15085 1522 aa34.02■■■■□ 3.04
CUTA-210ENST00000488034 IFT140Q96RY7 1462 aa34■■■■□ 3.03
CUTA-210ENST00000488034 PRDM2Q13029 1718 aa33.98■■■■□ 3.03
CUTA-210ENST00000488034 TOPBP1Q92547 1522 aa33.86■■■■□ 3.01
CUTA-210ENST00000488034 EIF4G3O43432 1585 aaKnown RBP33.83■■■■□ 3.01
CUTA-210ENST00000488034 CCDC88BA6NC98 1476 aa33.8■■■■□ 3
CUTA-210ENST00000488034 CYB5RLQ6IPT4 315 aa33.74■■■□□ 2.99
CUTA-210ENST00000488034 ARAP1Q96P48 1450 aa33.67■■■□□ 2.98
CUTA-210ENST00000488034 DNMBPQ6XZF7 1577 aa33.67■■■□□ 2.98
CUTA-210ENST00000488034 CHD1O14646 1710 aa33.67■■■□□ 2.98
CUTA-210ENST00000488034 ABCC8Q09428 1581 aa33.65■■■□□ 2.98
CUTA-210ENST00000488034 AQRO60306 1485 aaKnown RBP eCLIP33.63■■■□□ 2.973e-9■■■■■ 30.8
CUTA-210ENST00000488034 TARBP1Q13395 1621 aaKnown RBP33.62■■■□□ 2.97
CUTA-210ENST00000488034 TRHP20396 242 aaPredicted RBP33.55■■■□□ 2.96
CUTA-210ENST00000488034 POLA1P09884 1462 aaPredicted RBP33.49■■■□□ 2.95
CUTA-210ENST00000488034 FBLN2P98095 1184 aa33.48■■■□□ 2.95
CUTA-210ENST00000488034 RAD54L2Q9Y4B4 1467 aa33.38■■■□□ 2.93
CUTA-210ENST00000488034 TDRD9Q8NDG6 1382 aaKnown RBP33.32■■■□□ 2.92
CUTA-210ENST00000488034 CLASP1Q7Z460 1538 aa33.31■■■□□ 2.92
CUTA-210ENST00000488034 SNAPC4Q5SXM2 1469 aa33.3■■■□□ 2.92
CUTA-210ENST00000488034 SOGA1O94964 1423 aa33.27■■■□□ 2.92
CUTA-210ENST00000488034 FGD5Q6ZNL6 1462 aa33.18■■■□□ 2.9
CUTA-210ENST00000488034 WDR97A6NE52 1622 aa33.17■■■□□ 2.9
CUTA-210ENST00000488034 SYNJ1O43426 1573 aa33.17■■■□□ 2.9
CUTA-210ENST00000488034 MAGI1Q96QZ7 1491 aaPredicted RBP33.13■■■□□ 2.89
CUTA-210ENST00000488034 CHMP7Q8WUX9 453 aaPredicted RBP33.11■■■□□ 2.89
CUTA-210ENST00000488034 GRIN2BQ13224 1484 aa33.07■■■□□ 2.88
CUTA-210ENST00000488034 CUX1P39880 1505 aa33.07■■■□□ 2.88
CUTA-210ENST00000488034 SYNJ2O15056 1496 aa33.05■■■□□ 2.88
CUTA-210ENST00000488034 AEBP2Q6ZN18 517 aaPredicted RBP33.02■■■□□ 2.88
CUTA-210ENST00000488034 GAPVD1Q14C86 1478 aa32.96■■■□□ 2.87
CUTA-210ENST00000488034 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
CUTA-210ENST00000488034 ABCA5Q8WWZ7 1642 aa32.79■■■□□ 2.84
CUTA-210ENST00000488034 ERCC6L2Q5T890 1561 aa32.78■■■□□ 2.84
CUTA-210ENST00000488034 ABCA10Q8WWZ4 1543 aa32.75■■■□□ 2.83
CUTA-210ENST00000488034 GRIN2AQ12879 1464 aa32.67■■■□□ 2.82
CUTA-210ENST00000488034 CEP170Q5SW79 1584 aa32.62■■■□□ 2.81
CUTA-210ENST00000488034 NUP160Q12769 1436 aa32.6■■■□□ 2.81
CUTA-210ENST00000488034 ADAMTS12P58397 1594 aa32.59■■■□□ 2.81
CUTA-210ENST00000488034 SHROOM2Q13796 1616 aa32.52■■■□□ 2.8
CUTA-210ENST00000488034 WRNQ14191 1432 aaPredicted RBP eCLIP32.45■■■□□ 2.796e-6■■■□□ 16.7
CUTA-210ENST00000488034 KIF13AQ9H1H9 1805 aa32.42■■■□□ 2.78
CUTA-210ENST00000488034 FHAD1B1AJZ9 1412 aa32.42■■■□□ 2.78
CUTA-210ENST00000488034 BIVM-ERCC5R4GMW8 1640 aa32.33■■■□□ 2.77
CUTA-210ENST00000488034 TOP2BQ02880 1626 aa32.32■■■□□ 2.76
CUTA-210ENST00000488034 PRG4Q92954 1404 aaPredicted RBP32.31■■■□□ 2.76
CUTA-210ENST00000488034 ERICH3Q5RHP9 1530 aa32.31■■■□□ 2.76
CUTA-210ENST00000488034 ABCC10Q5T3U5 1492 aa32.19■■■□□ 2.74
CUTA-210ENST00000488034 JPH4Q96JJ6 628 aa32.18■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms