RNA–Protein interactions for RNA: ENST00000611509.4

CUTA-215, Transcript of cutA divalent cation tolerance homolog, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CUTA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUTA-215ENST00000611509 NISCHQ9Y2I1 1504 aa34.71■■■■□ 3.15
CUTA-215ENST00000611509 CCDC180Q9P1Z9 1646 aa30.89■■■□□ 2.54
CUTA-215ENST00000611509 ABCC9O60706 1549 aa30.73■■■□□ 2.51
CUTA-215ENST00000611509 RB1CC1Q8TDY2 1594 aa29.37■■■□□ 2.29
CUTA-215ENST00000611509 DCAF8L2P0C7V8 631 aa29.35■■■□□ 2.29
CUTA-215ENST00000611509 NACADO15069 1562 aa29.26■■■□□ 2.27
CUTA-215ENST00000611509 MYO15BQ96JP2 1530 aa28.98■■■□□ 2.23
CUTA-215ENST00000611509 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
CUTA-215ENST00000611509 PABPN1Q86U42 306 aaKnown RBP eCLIP28.74■■■□□ 2.19
CUTA-215ENST00000611509 DCAF1Q9Y4B6 1507 aa28.69■■■□□ 2.18
CUTA-215ENST00000611509 DNAJC5BQ9UF47 199 aa28.59■■■□□ 2.17
CUTA-215ENST00000611509 UNC13AQ9UPW8 1703 aa28.45■■■□□ 2.14
CUTA-215ENST00000611509 BICRAQ9NZM4 1560 aa28.4■■■□□ 2.14
CUTA-215ENST00000611509 SCRIBQ14160 1630 aa28.19■■■□□ 2.1
CUTA-215ENST00000611509 SHROOM4Q9ULL8 1493 aa28.19■■■□□ 2.1
CUTA-215ENST00000611509 EIF4G1Q04637 1599 aaKnown RBP27.74■■■□□ 2.03
CUTA-215ENST00000611509 CC2D2AQ9P2K1 1620 aa27.7■■■□□ 2.03
CUTA-215ENST00000611509 CECR2Q9BXF3 1484 aa27.68■■■□□ 2.02
CUTA-215ENST00000611509 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
CUTA-215ENST00000611509 ATAD2BQ9ULI0 1458 aa26.98■■□□□ 1.91
CUTA-215ENST00000611509 SMARCA4P51532 1647 aa26.93■■□□□ 1.9
CUTA-215ENST00000611509 BAZ1AQ9NRL2 1556 aaPredicted RBP26.92■■□□□ 1.9
CUTA-215ENST00000611509 SMARCA2P51531 1590 aa26.92■■□□□ 1.9
CUTA-215ENST00000611509 HMGXB3Q12766 1538 aa26.8■■□□□ 1.88
CUTA-215ENST00000611509 BAZ1BQ9UIG0 1483 aaKnown RBP26.74■■□□□ 1.87
CUTA-215ENST00000611509 MROH2BQ7Z745 1585 aa26.71■■□□□ 1.87
CUTA-215ENST00000611509 PEG3Q9GZU2 1588 aa26.7■■□□□ 1.86
CUTA-215ENST00000611509 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
CUTA-215ENST00000611509 NESP48681 1621 aa26.43■■□□□ 1.82
CUTA-215ENST00000611509 CUX2O14529 1486 aa26.4■■□□□ 1.82
CUTA-215ENST00000611509 RSF1Q96T23 1441 aaPredicted RBP26.34■■□□□ 1.81
CUTA-215ENST00000611509 WIZO95785 1651 aa26.33■■□□□ 1.81
CUTA-215ENST00000611509 LAMC3Q9Y6N6 1575 aa26.33■■□□□ 1.8
CUTA-215ENST00000611509 CADPSQ9ULU8 1353 aa26.29■■□□□ 1.8
CUTA-215ENST00000611509 PDS5BQ9NTI5 1447 aa26.29■■□□□ 1.8
CUTA-215ENST00000611509 DNAJC5Q9H3Z4 198 aa26.13■■□□□ 1.77
CUTA-215ENST00000611509 TOP2AP11388 1531 aaKnown RBP26.09■■□□□ 1.77
CUTA-215ENST00000611509 THOC2Q8NI27 1593 aaKnown RBP26.03■■□□□ 1.76
CUTA-215ENST00000611509 CFTRP13569 1480 aa25.99■■□□□ 1.75
CUTA-215ENST00000611509 KIF21AQ7Z4S6 1674 aa25.97■■□□□ 1.75
CUTA-215ENST00000611509 MRC2Q9UBG0 1479 aa25.95■■□□□ 1.74
CUTA-215ENST00000611509 FANCD2Q9BXW9 1451 aa25.92■■□□□ 1.74
CUTA-215ENST00000611509 CEP164Q9UPV0 1460 aa25.91■■□□□ 1.74
CUTA-215ENST00000611509 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
CUTA-215ENST00000611509 WDR62O43379 1518 aa25.83■■□□□ 1.72
CUTA-215ENST00000611509 URB2Q14146 1524 aaKnown RBP25.63■■□□□ 1.69
CUTA-215ENST00000611509 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
CUTA-215ENST00000611509 ABCC8Q09428 1581 aa25.5■■□□□ 1.67
CUTA-215ENST00000611509 PRDM2Q13029 1718 aa25.5■■□□□ 1.67
CUTA-215ENST00000611509 TOPBP1Q92547 1522 aa25.43■■□□□ 1.66
CUTA-215ENST00000611509 IFT140Q96RY7 1462 aa25.42■■□□□ 1.66
CUTA-215ENST00000611509 OSCARQ8IYS5 282 aa25.38■■□□□ 1.65
CUTA-215ENST00000611509 DNMBPQ6XZF7 1577 aa25.34■■□□□ 1.65
CUTA-215ENST00000611509 ZNF608Q9ULD9 1512 aaPredicted RBP25.27■■□□□ 1.64
CUTA-215ENST00000611509 POLA1P09884 1462 aaPredicted RBP25.2■■□□□ 1.62
CUTA-215ENST00000611509 SOGA1O94964 1423 aa25.18■■□□□ 1.62
CUTA-215ENST00000611509 AQRO60306 1485 aaKnown RBP eCLIP25.15■■□□□ 1.623e-9■■■■■ 30.8
CUTA-215ENST00000611509 RAD54L2Q9Y4B4 1467 aa25.11■■□□□ 1.61
CUTA-215ENST00000611509 TARBP1Q13395 1621 aaKnown RBP25.1■■□□□ 1.61
CUTA-215ENST00000611509 TRIM41Q8WV44 630 aa25.09■■□□□ 1.61
CUTA-215ENST00000611509 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.6
CUTA-215ENST00000611509 TDRD9Q8NDG6 1382 aaKnown RBP25.07■■□□□ 1.6
CUTA-215ENST00000611509 EIF4G3O43432 1585 aaKnown RBP25.07■■□□□ 1.6
CUTA-215ENST00000611509 CUX1P39880 1505 aa25.07■■□□□ 1.6
CUTA-215ENST00000611509 FBLN2P98095 1184 aa25.04■■□□□ 1.6
CUTA-215ENST00000611509 WDR97A6NE52 1622 aa24.94■■□□□ 1.58
CUTA-215ENST00000611509 CHMP7Q8WUX9 453 aaPredicted RBP24.92■■□□□ 1.58
CUTA-215ENST00000611509 GRIN2BQ13224 1484 aa24.89■■□□□ 1.58
CUTA-215ENST00000611509 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.576e-6■■■□□ 16.7
CUTA-215ENST00000611509 SNAPC4Q5SXM2 1469 aa24.86■■□□□ 1.57
CUTA-215ENST00000611509 MAGI1Q96QZ7 1491 aaPredicted RBP24.84■■□□□ 1.57
CUTA-215ENST00000611509 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
CUTA-215ENST00000611509 GAPVD1Q14C86 1478 aa24.83■■□□□ 1.57
CUTA-215ENST00000611509 ARHGEF11O15085 1522 aa24.78■■□□□ 1.56
CUTA-215ENST00000611509 CHD1O14646 1710 aa24.76■■□□□ 1.55
CUTA-215ENST00000611509 SYNJ2O15056 1496 aa24.76■■□□□ 1.55
CUTA-215ENST00000611509 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
CUTA-215ENST00000611509 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
CUTA-215ENST00000611509 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
CUTA-215ENST00000611509 TOP2BQ02880 1626 aa24.75■■□□□ 1.55
CUTA-215ENST00000611509 CYB5RLQ6IPT4 315 aa24.73■■□□□ 1.55
CUTA-215ENST00000611509 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
CUTA-215ENST00000611509 SYNJ1O43426 1573 aa24.68■■□□□ 1.54
CUTA-215ENST00000611509 ABCA5Q8WWZ7 1642 aa24.66■■□□□ 1.54
CUTA-215ENST00000611509 PBRM1Q86U86 1689 aa24.6■■□□□ 1.53
CUTA-215ENST00000611509 CLASP1Q7Z460 1538 aa24.59■■□□□ 1.53
CUTA-215ENST00000611509 FHAD1B1AJZ9 1412 aa24.56■■□□□ 1.52
CUTA-215ENST00000611509 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
CUTA-215ENST00000611509 GRIN2AQ12879 1464 aa24.53■■□□□ 1.52
CUTA-215ENST00000611509 ERICH3Q5RHP9 1530 aa24.52■■□□□ 1.52
CUTA-215ENST00000611509 ADAMTS12P58397 1594 aa24.46■■□□□ 1.51
CUTA-215ENST00000611509 NUP160Q12769 1436 aa24.44■■□□□ 1.5
CUTA-215ENST00000611509 KIF27Q86VH2 1401 aa24.41■■□□□ 1.5
CUTA-215ENST00000611509 TRHP20396 242 aaPredicted RBP24.39■■□□□ 1.49
CUTA-215ENST00000611509 IGF1RP08069 1367 aa24.37■■□□□ 1.49
CUTA-215ENST00000611509 CEP170Q5SW79 1584 aa24.35■■□□□ 1.49
CUTA-215ENST00000611509 JPH4Q96JJ6 628 aa24.32■■□□□ 1.48
CUTA-215ENST00000611509 PRG4Q92954 1404 aaPredicted RBP24.24■■□□□ 1.47
CUTA-215ENST00000611509 CARMIL1Q5VZK9 1371 aa24.22■■□□□ 1.47
CUTA-215ENST00000611509 SHROOM2Q13796 1616 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms