RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 AEBP2Q6ZN18 517 aaPredicted RBP12,7□□□□□ -0,38
COPB1-212ENST00000534771 CHIC1Q5VXU3 224 aa11,81□□□□□ -0,52
COPB1-212ENST00000534771 POTEDQ86YR6 584 aa11,61□□□□□ -0,55
COPB1-212ENST00000534771 SENP3Q9H4L4 574 aaPredicted RBP10,94□□□□□ -0,66
COPB1-212ENST00000534771 PHF23Q9BUL5 403 aaPredicted RBP10,73□□□□□ -0,69
COPB1-212ENST00000534771 FOXD1Q16676 465 aa10,38□□□□□ -0,75
COPB1-212ENST00000534771 MSH5O43196 834 aa10,05□□□□□ -0,8
COPB1-212ENST00000534771 PIAS4Q8N2W9 510 aaPredicted RBP9,45□□□□□ -0,9
COPB1-212ENST00000534771 CACNB1Q02641 598 aaPredicted RBP9,34□□□□□ -0,91
COPB1-212ENST00000534771 PPP6R1Q9UPN7 881 aa8,95□□□□□ -0,98
COPB1-212ENST00000534771 POTEHQ6S545 545 aa8,89□□□□□ -0,99
COPB1-212ENST00000534771 ADRA2BP18089 450 aa8,88□□□□□ -0,99
COPB1-212ENST00000534771 DMRT2Q9Y5R5 561 aa8,52□□□□□ -1,05
COPB1-212ENST00000534771 MAPK8IP2Q13387 824 aaPredicted RBP8,49□□□□□ -1,05
COPB1-212ENST00000534771 RNF39Q9H2S5 420 aa8,49□□□□□ -1,05
COPB1-212ENST00000534771 DCAF8L1A6NGE4 600 aa8,36□□□□□ -1,07
COPB1-212ENST00000534771 PLPPR3Q6T4P5 718 aa8,35□□□□□ -1,07
COPB1-212ENST00000534771 C1QBPQ07021 282 aaKnown RBP8,3□□□□□ -1,08
COPB1-212ENST00000534771 SCAF1Q9H7N4 1312 aaKnown RBP8,06□□□□□ -1,12
COPB1-212ENST00000534771 PLSCR2Q9NRY7 297 aa7,86□□□□□ -1,15
COPB1-212ENST00000534771 SP7Q8TDD2 431 aaPredicted RBP7,84□□□□□ -1,15
COPB1-212ENST00000534771 HOXD11P31277 338 aaPredicted RBP7,79□□□□□ -1,16
COPB1-212ENST00000534771 DNAJC5BQ9UF47 199 aa7,64□□□□□ -1,19
COPB1-212ENST00000534771 DSG3P32926 999 aa7,63□□□□□ -1,19
COPB1-212ENST00000534771 CHRDL2Q6WN34 429 aa7,56□□□□□ -1,2
COPB1-212ENST00000534771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7,51□□□□□ -1,212e-7■□□□□ 10,3
COPB1-212ENST00000534771 CAPN15O75808 1086 aa7,49□□□□□ -1,21
COPB1-212ENST00000534771 RNF216Q9NWF9 866 aaPredicted RBP7,47□□□□□ -1,21
COPB1-212ENST00000534771 SPINK5Q9NQ38 1064 aaPredicted RBP7,44□□□□□ -1,22
COPB1-212ENST00000534771 HAX1O00165 279 aa7,38□□□□□ -1,23
COPB1-212ENST00000534771 LHX8Q68G74 356 aa7,38□□□□□ -1,23
COPB1-212ENST00000534771 CNKSR2Q8WXI2 1034 aa7,29□□□□□ -1,24
COPB1-212ENST00000534771 RBM42Q9BTD8 480 aaKnown RBP7,27□□□□□ -1,25
COPB1-212ENST00000534771 ABCB7O75027 752 aa7,24□□□□□ -1,25
COPB1-212ENST00000534771 PPP4R3CPQ6ZMV5 832 aa7,22□□□□□ -1,25
COPB1-212ENST00000534771 EVX2Q03828 476 aa7,2□□□□□ -1,26
COPB1-212ENST00000534771 U3KPZ7 1027 aaPredicted RBP7,19□□□□□ -1,26
COPB1-212ENST00000534771 PIP4P2Q8N4L2 257 aa7,17□□□□□ -1,26
COPB1-212ENST00000534771 TRHP20396 242 aaPredicted RBP7,15□□□□□ -1,26
COPB1-212ENST00000534771 POTEMA6NI47 508 aa7□□□□□ -1,29
COPB1-212ENST00000534771 ZNF219Q9P2Y4 722 aaPredicted RBP6,98□□□□□ -1,29
COPB1-212ENST00000534771 GABBR2O75899 941 aa6,95□□□□□ -1,3
COPB1-212ENST00000534771 POTEGQ6S5H5 508 aa6,94□□□□□ -1,3
COPB1-212ENST00000534771 FXR2P51116 673 aaKnown RBP eCLIP6,93□□□□□ -1,33e-8■■■■■ 34,4
COPB1-212ENST00000534771 AKT1S1Q96B36 256 aa6,9□□□□□ -1,3
COPB1-212ENST00000534771 REM2Q8IYK8 340 aaPredicted RBP6,88□□□□□ -1,31
COPB1-212ENST00000534771 PCDH10Q9P2E7 1040 aa6,87□□□□□ -1,31
COPB1-212ENST00000534771 APLP2Q06481 763 aa6,83□□□□□ -1,32
COPB1-212ENST00000534771 PITPNM1O00562 1244 aa6,81□□□□□ -1,32
COPB1-212ENST00000534771 POTEIP0CG38 1075 aa6,79□□□□□ -1,32
COPB1-212ENST00000534771 C19orf67A6NJJ6 358 aa6,75□□□□□ -1,33
COPB1-212ENST00000534771 OTUD5Q96G74 571 aa6,73□□□□□ -1,33
COPB1-212ENST00000534771 POLA2Q14181 598 aa6,69□□□□□ -1,34
COPB1-212ENST00000534771 PRKAR2AP13861 404 aaKnown RBP6,64□□□□□ -1,35
COPB1-212ENST00000534771 NCBP3Q53F19 620 aaKnown RBP6,61□□□□□ -1,35
COPB1-212ENST00000534771 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6,59□□□□□ -1,35
COPB1-212ENST00000534771 HNRNPUL2Q1KMD3 747 aaKnown RBP6,59□□□□□ -1,35
COPB1-212ENST00000534771 DCBLD2Q96PD2 775 aa6,56□□□□□ -1,36
COPB1-212ENST00000534771 POTEB2H3BUK9 544 aa6,55□□□□□ -1,36
COPB1-212ENST00000534771 FAM163AQ96GL9 167 aaPredicted RBP6,53□□□□□ -1,36
COPB1-212ENST00000534771 NPM3O75607 178 aaKnown RBP6,52□□□□□ -1,37
COPB1-212ENST00000534771 SAMD1Q6SPF0 538 aaPredicted RBP6,52□□□□□ -1,37
COPB1-212ENST00000534771 SLC4A2P04920 1241 aa6,5□□□□□ -1,37
COPB1-212ENST00000534771 LCE2DQ5TA82 110 aaPredicted RBP6,49□□□□□ -1,37
COPB1-212ENST00000534771 OSCARQ8IYS5 282 aa6,49□□□□□ -1,37
COPB1-212ENST00000534771 CDAN1Q8IWY9 1227 aa6,47□□□□□ -1,37
COPB1-212ENST00000534771 MMRN1Q13201 1228 aa6,41□□□□□ -1,38
COPB1-212ENST00000534771 CLEC11AQ9Y240 323 aa6,41□□□□□ -1,38
COPB1-212ENST00000534771 CLCN6P51797 869 aa6,38□□□□□ -1,39
COPB1-212ENST00000534771 CHADLQ6NUI6 762 aa6,38□□□□□ -1,39
COPB1-212ENST00000534771 ZBTB12Q9Y330 459 aaPredicted RBP6,37□□□□□ -1,39
COPB1-212ENST00000534771 CD44P16070 742 aaKnown RBP6,36□□□□□ -1,39
COPB1-212ENST00000534771 SPNS2Q8IVW8 549 aa6,32□□□□□ -1,4
COPB1-212ENST00000534771 SPDYE1Q8NFV5 336 aaPredicted RBP6,29□□□□□ -1,4
COPB1-212ENST00000534771 POTEJP0CG39 1038 aa6,28□□□□□ -1,4
COPB1-212ENST00000534771 MAMSTRQ6ZN01 415 aa6,25□□□□□ -1,41
COPB1-212ENST00000534771 GALR2O43603 387 aaPredicted RBP6,22□□□□□ -1,41
COPB1-212ENST00000534771 PELP1Q8IZL8 1130 aaKnown RBP6,21□□□□□ -1,42
COPB1-212ENST00000534771 SCUBE2Q9NQ36 999 aa6,17□□□□□ -1,42
COPB1-212ENST00000534771 ZNF579Q8NAF0 562 aaKnown RBP6,15□□□□□ -1,42
COPB1-212ENST00000534771 METRNQ9UJH8 293 aa6,15□□□□□ -1,42
COPB1-212ENST00000534771 ZRANB1Q9UGI0 708 aa6,14□□□□□ -1,43
COPB1-212ENST00000534771 FARP1Q9Y4F1 1045 aaPredicted RBP6,14□□□□□ -1,43
COPB1-212ENST00000534771 PRR29P0C7W0 189 aa6,13□□□□□ -1,43
COPB1-212ENST00000534771 SPDYE2BA6NHP3 402 aa6,11□□□□□ -1,43
COPB1-212ENST00000534771 SPDYE6P0CI01 402 aa6,11□□□□□ -1,43
COPB1-212ENST00000534771 SPDYE2Q495Y8 402 aa6,11□□□□□ -1,43
COPB1-212ENST00000534771 C7P10643 843 aa6,08□□□□□ -1,44
COPB1-212ENST00000534771 ST18O60284 1047 aa6,06□□□□□ -1,44
COPB1-212ENST00000534771 SLC39A7Q92504 469 aa6,06□□□□□ -1,44
COPB1-212ENST00000534771 ATF5Q9Y2D1 282 aaPredicted RBP6,05□□□□□ -1,44
COPB1-212ENST00000534771 MYCNP04198 464 aaPredicted RBP6,02□□□□□ -1,45
COPB1-212ENST00000534771 PHF12Q96QT6 1004 aa5,97□□□□□ -1,45
COPB1-212ENST00000534771 ATMINO43313 823 aaPredicted RBP5,96□□□□□ -1,46
COPB1-212ENST00000534771 ASTLQ6HA08 431 aaPredicted RBP5,96□□□□□ -1,46
COPB1-212ENST00000534771 ZNF692Q9BU19 519 aaPredicted RBP5,95□□□□□ -1,46
COPB1-212ENST00000534771 SSUH2Q9Y2M2 353 aa5,9□□□□□ -1,46
COPB1-212ENST00000534771 POTEFA5A3E0 1075 aa5,89□□□□□ -1,47
COPB1-212ENST00000534771 MARVELD3Q96A59 401 aa5,89□□□□□ -1,47
COPB1-212ENST00000534771 SLAIN1Q8ND83 568 aa5,86□□□□□ -1,47
Retrieved 100 of 20,778 RNA–protein pairs in 18,8 ms