RNA–Protein interactions for RNA: ENST00000451728.6

CNBP-204, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

TSL 1 (best) BASIC

Gene CNBP, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-204ENST00000451728 NISCHQ9Y2I1 1504 aa32.09■■■□□ 2.73
CNBP-204ENST00000451728 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
CNBP-204ENST00000451728 ZCCHC6Q5VYS8 1495 aaKnown RBP26.89■■□□□ 1.9
CNBP-204ENST00000451728 ABCC9O60706 1549 aa26.74■■□□□ 1.87
CNBP-204ENST00000451728 DCAF8L2P0C7V8 631 aa26.69■■□□□ 1.86
CNBP-204ENST00000451728 DCAF1Q9Y4B6 1507 aa26.52■■□□□ 1.84
CNBP-204ENST00000451728 MYO15BQ96JP2 1530 aa26.29■■□□□ 1.8
CNBP-204ENST00000451728 NACADO15069 1562 aa26.2■■□□□ 1.78
CNBP-204ENST00000451728 SHROOM4Q9ULL8 1493 aa26.08■■□□□ 1.77
CNBP-204ENST00000451728 RB1CC1Q8TDY2 1594 aa26.03■■□□□ 1.76
CNBP-204ENST00000451728 SCRIBQ14160 1630 aa25.78■■□□□ 1.72
CNBP-204ENST00000451728 UNC13AQ9UPW8 1703 aa25.42■■□□□ 1.66
CNBP-204ENST00000451728 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.63
CNBP-204ENST00000451728 BICRAQ9NZM4 1560 aa25.2■■□□□ 1.62
CNBP-204ENST00000451728 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
CNBP-204ENST00000451728 CECR2Q9BXF3 1484 aa24.95■■□□□ 1.58
CNBP-204ENST00000451728 RSF1Q96T23 1441 aaPredicted RBP24.83■■□□□ 1.57
CNBP-204ENST00000451728 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
CNBP-204ENST00000451728 MROH2BQ7Z745 1585 aa24.78■■□□□ 1.56
CNBP-204ENST00000451728 SMARCA4P51532 1647 aa24.69■■□□□ 1.54
CNBP-204ENST00000451728 WIZO95785 1651 aa24.56■■□□□ 1.52
CNBP-204ENST00000451728 EIF4G1Q04637 1599 aaKnown RBP24.49■■□□□ 1.51
CNBP-204ENST00000451728 PEG3Q9GZU2 1588 aa24.38■■□□□ 1.49
CNBP-204ENST00000451728 ATAD2BQ9ULI0 1458 aa24.36■■□□□ 1.49
CNBP-204ENST00000451728 SMARCA2P51531 1590 aa24.34■■□□□ 1.49
CNBP-204ENST00000451728 TOP2AP11388 1531 aaKnown RBP24.3■■□□□ 1.48
CNBP-204ENST00000451728 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
CNBP-204ENST00000451728 NCAPD3P42695 1498 aa24.19■■□□□ 1.46
CNBP-204ENST00000451728 CC2D2AQ9P2K1 1620 aa24.18■■□□□ 1.46
CNBP-204ENST00000451728 HMGXB3Q12766 1538 aa24.11■■□□□ 1.45
CNBP-204ENST00000451728 CCDC88BA6NC98 1476 aa24.08■■□□□ 1.44
CNBP-204ENST00000451728 CHIC1Q5VXU3 224 aa23.84■■□□□ 1.41
CNBP-204ENST00000451728 DNAJC5BQ9UF47 199 aa23.77■■□□□ 1.4
CNBP-204ENST00000451728 CFTRP13569 1480 aa23.6■■□□□ 1.37
CNBP-204ENST00000451728 CADPSQ9ULU8 1353 aa23.59■■□□□ 1.37
CNBP-204ENST00000451728 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
CNBP-204ENST00000451728 ABCC8Q09428 1581 aa23.48■■□□□ 1.35
CNBP-204ENST00000451728 PRDM2Q13029 1718 aa23.4■■□□□ 1.34
CNBP-204ENST00000451728 NESP48681 1621 aa23.4■■□□□ 1.34
CNBP-204ENST00000451728 LAMC3Q9Y6N6 1575 aa23.39■■□□□ 1.34
CNBP-204ENST00000451728 WRNQ14191 1432 aaPredicted RBP eCLIP23.39■■□□□ 1.34
CNBP-204ENST00000451728 FANCD2Q9BXW9 1451 aa23.3■■□□□ 1.32
CNBP-204ENST00000451728 PDS5BQ9NTI5 1447 aa23.27■■□□□ 1.31
CNBP-204ENST00000451728 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
CNBP-204ENST00000451728 TOP2BQ02880 1626 aa23.19■■□□□ 1.3
CNBP-204ENST00000451728 CUX1P39880 1505 aa23.18■■□□□ 1.3
CNBP-204ENST00000451728 CEP164Q9UPV0 1460 aa23.18■■□□□ 1.3
CNBP-204ENST00000451728 BIVM-ERCC5R4GMW8 1640 aa23.15■■□□□ 1.3
CNBP-204ENST00000451728 FAM9AQ8IZU1 332 aaPredicted RBP23.12■■□□□ 1.29
CNBP-204ENST00000451728 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
CNBP-204ENST00000451728 DNMBPQ6XZF7 1577 aa23.04■■□□□ 1.28
CNBP-204ENST00000451728 SOGA1O94964 1423 aa23.03■■□□□ 1.28
CNBP-204ENST00000451728 TOPBP1Q92547 1522 aa23.02■■□□□ 1.28
CNBP-204ENST00000451728 URB2Q14146 1524 aaKnown RBP23■■□□□ 1.27
CNBP-204ENST00000451728 ERCC6Q03468 1493 aa22.98■■□□□ 1.27
CNBP-204ENST00000451728 FGD5Q6ZNL6 1462 aa22.97■■□□□ 1.27
CNBP-204ENST00000451728 EEA1Q15075 1411 aa22.96■■□□□ 1.27
CNBP-204ENST00000451728 MRC2Q9UBG0 1479 aa22.94■■□□□ 1.26
CNBP-204ENST00000451728 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
CNBP-204ENST00000451728 LOC105371045A0A1W2PR82 267 aa22.93■■□□□ 1.26
CNBP-204ENST00000451728 CSRNP3Q8WYN3 585 aa22.9■■□□□ 1.26
CNBP-204ENST00000451728 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
CNBP-204ENST00000451728 KIF27Q86VH2 1401 aa22.84■■□□□ 1.25
CNBP-204ENST00000451728 RAD54L2Q9Y4B4 1467 aa22.82■■□□□ 1.24
CNBP-204ENST00000451728 CUX2O14529 1486 aa22.81■■□□□ 1.24
CNBP-204ENST00000451728 EHMT2Q96KQ7 1210 aa22.81■■□□□ 1.24
CNBP-204ENST00000451728 WDR62O43379 1518 aa22.8■■□□□ 1.24
CNBP-204ENST00000451728 ABCA10Q8WWZ4 1543 aa22.76■■□□□ 1.23
CNBP-204ENST00000451728 THOC2Q8NI27 1593 aaKnown RBP22.75■■□□□ 1.23
CNBP-204ENST00000451728 TARBP1Q13395 1621 aaKnown RBP22.65■■□□□ 1.22
CNBP-204ENST00000451728 WDR97A6NE52 1622 aa22.65■■□□□ 1.22
CNBP-204ENST00000451728 IGF1RP08069 1367 aa22.65■■□□□ 1.22
CNBP-204ENST00000451728 IFT140Q96RY7 1462 aa22.65■■□□□ 1.22
CNBP-204ENST00000451728 TDRD9Q8NDG6 1382 aaKnown RBP22.64■■□□□ 1.22
CNBP-204ENST00000451728 GOLGA3Q08378 1498 aa22.63■■□□□ 1.21
CNBP-204ENST00000451728 KIF21BO75037 1637 aa22.63■■□□□ 1.21
CNBP-204ENST00000451728 UBTFP17480 764 aaKnown RBP22.61■■□□□ 1.21
CNBP-204ENST00000451728 PRXQ9BXM0 1461 aa22.59■■□□□ 1.21
CNBP-204ENST00000451728 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
CNBP-204ENST00000451728 ABCA5Q8WWZ7 1642 aa22.56■■□□□ 1.2
CNBP-204ENST00000451728 RAPGEF2Q9Y4G8 1499 aa22.55■■□□□ 1.2
CNBP-204ENST00000451728 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
CNBP-204ENST00000451728 TNIKQ9UKE5 1360 aa22.54■■□□□ 1.2
CNBP-204ENST00000451728 ERICH3Q5RHP9 1530 aa22.53■■□□□ 1.2
CNBP-204ENST00000451728 AQRO60306 1485 aaKnown RBP eCLIP22.52■■□□□ 1.23e-6■■■□□ 18.6
CNBP-204ENST00000451728 ZNF608Q9ULD9 1512 aaPredicted RBP22.5■■□□□ 1.19
CNBP-204ENST00000451728 CUL7Q14999 1698 aa22.45■■□□□ 1.18
CNBP-204ENST00000451728 GRIN2BQ13224 1484 aa22.44■■□□□ 1.18
CNBP-204ENST00000451728 PBRM1Q86U86 1689 aa22.41■■□□□ 1.18
CNBP-204ENST00000451728 EIF4G3O43432 1585 aaKnown RBP22.4■■□□□ 1.18
CNBP-204ENST00000451728 CEP162Q5TB80 1403 aa22.37■■□□□ 1.17
CNBP-204ENST00000451728 FHAD1B1AJZ9 1412 aa22.34■■□□□ 1.17
CNBP-204ENST00000451728 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
CNBP-204ENST00000451728 SNAPC4Q5SXM2 1469 aa22.3■■□□□ 1.16
CNBP-204ENST00000451728 ADAMTS12P58397 1594 aa22.29■■□□□ 1.16
CNBP-204ENST00000451728 CLIP1P30622 1438 aa22.26■■□□□ 1.15
CNBP-204ENST00000451728 MAGI1Q96QZ7 1491 aaPredicted RBP22.25■■□□□ 1.15
CNBP-204ENST00000451728 CHMP7Q8WUX9 453 aaPredicted RBP22.2■■□□□ 1.15
CNBP-204ENST00000451728 FBLN2P98095 1184 aa22.17■■□□□ 1.14
CNBP-204ENST00000451728 SYNJ2O15056 1496 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms