RNA–Protein interactions for RNA: ENST00000340022.6

KRIT1-201, Transcript of KRIT1, ankyrin repeat containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRIT1, Length 4,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRIT1-201ENST00000340022 DCAF8L2P0C7V8 631 aa20.07■□□□□ 0.8
KRIT1-201ENST00000340022 NISCHQ9Y2I1 1504 aa19.72■□□□□ 0.75
KRIT1-201ENST00000340022 SUPT5HO00267 1087 aaKnown RBP19.69■□□□□ 0.74
KRIT1-201ENST00000340022 SHROOM4Q9ULL8 1493 aa19.18■□□□□ 0.66
KRIT1-201ENST00000340022 PELP1Q8IZL8 1130 aaKnown RBP19.13■□□□□ 0.65
KRIT1-201ENST00000340022 PCGF6Q9BYE7 350 aa18.9■□□□□ 0.62
KRIT1-201ENST00000340022 EHMT2Q96KQ7 1210 aa18.78■□□□□ 0.6
KRIT1-201ENST00000340022 ZEB1P37275 1124 aaPredicted RBP18.73■□□□□ 0.59
KRIT1-201ENST00000340022 CENPBP07199 599 aaPredicted RBP18.66■□□□□ 0.58
KRIT1-201ENST00000340022 APLP2Q06481 763 aa18.59■□□□□ 0.57
KRIT1-201ENST00000340022 MYT1Q01538 1121 aa18.57■□□□□ 0.56
KRIT1-201ENST00000340022 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
KRIT1-201ENST00000340022 CCER1Q8TC90 406 aaPredicted RBP18.37■□□□□ 0.53
KRIT1-201ENST00000340022 HRCP23327 699 aa18.3■□□□□ 0.52
KRIT1-201ENST00000340022 TRIM41Q8WV44 630 aa18.27■□□□□ 0.52
KRIT1-201ENST00000340022 TTBK1Q5TCY1 1321 aaPredicted RBP18.25■□□□□ 0.51
KRIT1-201ENST00000340022 ERICH6Q7L0X2 663 aa18.23■□□□□ 0.51
KRIT1-201ENST00000340022 TRIM26Q12899 539 aaPredicted RBP18.16■□□□□ 0.5
KRIT1-201ENST00000340022 YTHDC1Q96MU7 727 aaKnown RBP18.01■□□□□ 0.47
KRIT1-201ENST00000340022 NEFLP07196 543 aa18.01■□□□□ 0.47
KRIT1-201ENST00000340022 UBTFP17480 764 aaKnown RBP17.92■□□□□ 0.46
KRIT1-201ENST00000340022 CHIC1Q5VXU3 224 aa17.86■□□□□ 0.45
KRIT1-201ENST00000340022 RANGAP1P46060 587 aaPredicted RBP17.85■□□□□ 0.45
KRIT1-201ENST00000340022 PPARGC1BQ86YN6 1023 aaKnown RBP17.77■□□□□ 0.44
KRIT1-201ENST00000340022 LOC105371045A0A1W2PR82 267 aa17.74■□□□□ 0.43
KRIT1-201ENST00000340022 ATP1B4Q9UN42 357 aaPredicted RBP17.64■□□□□ 0.41
KRIT1-201ENST00000340022 DIEXFQ68CQ4 756 aaKnown RBP17.57■□□□□ 0.4
KRIT1-201ENST00000340022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
KRIT1-201ENST00000340022 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
KRIT1-201ENST00000340022 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
KRIT1-201ENST00000340022 DAXXQ9UER7 740 aaPredicted RBP17.36■□□□□ 0.37
KRIT1-201ENST00000340022 ITGAEP38570 1179 aa17.32■□□□□ 0.36
KRIT1-201ENST00000340022 ACIN1Q9UKV3 1341 aaKnown RBP17.23■□□□□ 0.35
KRIT1-201ENST00000340022 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
KRIT1-201ENST00000340022 ZNF316A6NFI3 1004 aaPredicted RBP17.14■□□□□ 0.34
KRIT1-201ENST00000340022 POLR3GLQ9BT43 218 aa17.12■□□□□ 0.33
KRIT1-201ENST00000340022 BCANQ96GW7 911 aa17.01■□□□□ 0.31
KRIT1-201ENST00000340022 CDK11AQ9UQ88 783 aaPredicted RBP17■□□□□ 0.31
KRIT1-201ENST00000340022 CLSPNQ9HAW4 1339 aa16.97■□□□□ 0.31
KRIT1-201ENST00000340022 ANP32CO43423 234 aa16.96■□□□□ 0.31
KRIT1-201ENST00000340022 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
KRIT1-201ENST00000340022 DCAF1Q9Y4B6 1507 aa16.92■□□□□ 0.3
KRIT1-201ENST00000340022 FAM50AQ14320 339 aaKnown RBP16.89■□□□□ 0.3
KRIT1-201ENST00000340022 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
KRIT1-201ENST00000340022 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
KRIT1-201ENST00000340022 TRIM52Q96A61 297 aa16.76■□□□□ 0.27
KRIT1-201ENST00000340022 CSRNP3Q8WYN3 585 aa16.73■□□□□ 0.27
KRIT1-201ENST00000340022 ANP32AP39687 249 aaKnown RBP16.7■□□□□ 0.26
KRIT1-201ENST00000340022 MYT1LQ9UL68 1186 aa16.69■□□□□ 0.26
KRIT1-201ENST00000340022 FKBP8Q14318 412 aa16.67■□□□□ 0.26
KRIT1-201ENST00000340022 SLC4A1APQ9BWU0 796 aaKnown RBP16.58■□□□□ 0.25
KRIT1-201ENST00000340022 ZNF326Q5BKZ1 582 aaKnown RBP16.54■□□□□ 0.24
KRIT1-201ENST00000340022 MIER1Q8N108 512 aa16.5■□□□□ 0.23
KRIT1-201ENST00000340022 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
KRIT1-201ENST00000340022 DDX10Q13206 875 aaKnown RBP16.48■□□□□ 0.23
KRIT1-201ENST00000340022 NPM2Q86SE8 214 aaKnown RBP16.45■□□□□ 0.22
KRIT1-201ENST00000340022 TONSLQ96HA7 1378 aa16.44■□□□□ 0.22
KRIT1-201ENST00000340022 EIF5BO60841 1220 aaKnown RBP16.42■□□□□ 0.22
KRIT1-201ENST00000340022 ZBTB47Q9UFB7 747 aaPredicted RBP16.42■□□□□ 0.22
KRIT1-201ENST00000340022 CANXP27824 592 aaKnown RBP16.41■□□□□ 0.22
KRIT1-201ENST00000340022 PABPN1Q86U42 306 aaKnown RBP eCLIP16.4■□□□□ 0.22
KRIT1-201ENST00000340022 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
KRIT1-201ENST00000340022 MYO15BQ96JP2 1530 aa16.37■□□□□ 0.21
KRIT1-201ENST00000340022 ABCC9O60706 1549 aa16.37■□□□□ 0.21
KRIT1-201ENST00000340022 CCDC136Q96JN2 1154 aa16.34■□□□□ 0.21
KRIT1-201ENST00000340022 ANP32EQ9BTT0 268 aa16.34■□□□□ 0.21
KRIT1-201ENST00000340022 FAM9BQ8IZU0 186 aa16.34■□□□□ 0.21
KRIT1-201ENST00000340022 P3H3Q8IVL6 736 aa16.33■□□□□ 0.2
KRIT1-201ENST00000340022 GLIPR1L2Q4G1C9 344 aa16.3■□□□□ 0.2
KRIT1-201ENST00000340022 NBR1Q14596 966 aa16.3■□□□□ 0.2
KRIT1-201ENST00000340022 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
KRIT1-201ENST00000340022 ANP32BQ92688 251 aaKnown RBP16.27■□□□□ 0.2
KRIT1-201ENST00000340022 UPF2Q9HAU5 1272 aaKnown RBP16.26■□□□□ 0.19
KRIT1-201ENST00000340022 MRS2Q9HD23 443 aa16.23■□□□□ 0.19
KRIT1-201ENST00000340022 NEFMP07197 916 aa16.22■□□□□ 0.19
KRIT1-201ENST00000340022 TMC1Q8TDI8 760 aa16.22■□□□□ 0.19
KRIT1-201ENST00000340022 CLIP1P30622 1438 aa16.17■□□□□ 0.18
KRIT1-201ENST00000340022 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.16■□□□□ 0.18
KRIT1-201ENST00000340022 HSP90AA1P07900 732 aaKnown RBP16.16■□□□□ 0.18
KRIT1-201ENST00000340022 IRX6P78412 446 aaPredicted RBP16.16■□□□□ 0.18
KRIT1-201ENST00000340022 EEA1Q15075 1411 aa16.13■□□□□ 0.17
KRIT1-201ENST00000340022 ZNF777Q9ULD5 760 aaPredicted RBP16.11■□□□□ 0.17
KRIT1-201ENST00000340022 CEP162Q5TB80 1403 aa16.11■□□□□ 0.17
KRIT1-201ENST00000340022 BCL11AQ9H165 835 aa16.11■□□□□ 0.17
KRIT1-201ENST00000340022 SALL2Q9Y467 1007 aaPredicted RBP16.11■□□□□ 0.17
KRIT1-201ENST00000340022 ARID3CA6NKF2 412 aa16.11■□□□□ 0.17
KRIT1-201ENST00000340022 EIF4G2P78344 907 aaKnown RBP eCLIP16.11■□□□□ 0.17
KRIT1-201ENST00000340022 SUPT16HQ9Y5B9 1047 aaKnown RBP16.1■□□□□ 0.17
KRIT1-201ENST00000340022 SCRIBQ14160 1630 aa16.09■□□□□ 0.17
KRIT1-201ENST00000340022 HIRIP3Q9BW71 556 aaPredicted RBP16.08■□□□□ 0.16
KRIT1-201ENST00000340022 DDRGK1Q96HY6 314 aa16.07■□□□□ 0.16
KRIT1-201ENST00000340022 FBLN2P98095 1184 aa16.04■□□□□ 0.16
KRIT1-201ENST00000340022 GOLGA3Q08378 1498 aa16.03■□□□□ 0.16
KRIT1-201ENST00000340022 TNIKQ9UKE5 1360 aa16.03■□□□□ 0.16
KRIT1-201ENST00000340022 CHIC2Q9UKJ5 165 aa16.02■□□□□ 0.16
KRIT1-201ENST00000340022 WDR43Q15061 677 aaKnown RBP eCLIP16.01■□□□□ 0.15
KRIT1-201ENST00000340022 PPP4R2Q9NY27 417 aa16.01■□□□□ 0.15
KRIT1-201ENST00000340022 RSF1Q96T23 1441 aaPredicted RBP16■□□□□ 0.15
KRIT1-201ENST00000340022 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
KRIT1-201ENST00000340022 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms