RNA–Protein interactions for RNA: ENST00000295754.9

TGFBR2-201, Transcript of transforming growth factor beta receptor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR2, Length 4,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR2-201ENST00000295754 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.22
TGFBR2-201ENST00000295754 DCAF8L2P0C7V8 631 aa27.87■■■□□ 2.05
TGFBR2-201ENST00000295754 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
TGFBR2-201ENST00000295754 SUPT5HO00267 1087 aaKnown RBP26.5■■□□□ 1.83
TGFBR2-201ENST00000295754 EHMT2Q96KQ7 1210 aa25.39■■□□□ 1.65
TGFBR2-201ENST00000295754 FAM9AQ8IZU1 332 aaPredicted RBP24.89■■□□□ 1.57
TGFBR2-201ENST00000295754 ABCC9O60706 1549 aa24.76■■□□□ 1.55
TGFBR2-201ENST00000295754 PCGF6Q9BYE7 350 aa24.76■■□□□ 1.55
TGFBR2-201ENST00000295754 PELP1Q8IZL8 1130 aaKnown RBP24.72■■□□□ 1.55
TGFBR2-201ENST00000295754 TRIM41Q8WV44 630 aa24.37■■□□□ 1.49
TGFBR2-201ENST00000295754 PABPN1Q86U42 306 aaKnown RBP eCLIP24.34■■□□□ 1.49
TGFBR2-201ENST00000295754 TTBK1Q5TCY1 1321 aaPredicted RBP24.33■■□□□ 1.49
TGFBR2-201ENST00000295754 CENPBP07199 599 aaPredicted RBP24.26■■□□□ 1.47
TGFBR2-201ENST00000295754 ZEB1P37275 1124 aaPredicted RBP24.25■■□□□ 1.47
TGFBR2-201ENST00000295754 RANGAP1P46060 587 aaPredicted RBP24.25■■□□□ 1.47
TGFBR2-201ENST00000295754 MYT1Q01538 1121 aa24.13■■□□□ 1.45
TGFBR2-201ENST00000295754 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
TGFBR2-201ENST00000295754 LOC105371045A0A1W2PR82 267 aa24.05■■□□□ 1.44
TGFBR2-201ENST00000295754 ZCCHC6Q5VYS8 1495 aaKnown RBP24.01■■□□□ 1.43
TGFBR2-201ENST00000295754 HRCP23327 699 aa23.99■■□□□ 1.43
TGFBR2-201ENST00000295754 APLP2Q06481 763 aa23.97■■□□□ 1.43
TGFBR2-201ENST00000295754 PPARGC1BQ86YN6 1023 aaKnown RBP23.94■■□□□ 1.42
TGFBR2-201ENST00000295754 CCER1Q8TC90 406 aaPredicted RBP23.91■■□□□ 1.42
TGFBR2-201ENST00000295754 CCDC180Q9P1Z9 1646 aa23.82■■□□□ 1.4
TGFBR2-201ENST00000295754 UBTFP17480 764 aaKnown RBP23.82■■□□□ 1.4
TGFBR2-201ENST00000295754 SCRIBQ14160 1630 aa23.76■■□□□ 1.39
TGFBR2-201ENST00000295754 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.38
TGFBR2-201ENST00000295754 TRIM26Q12899 539 aaPredicted RBP23.62■■□□□ 1.37
TGFBR2-201ENST00000295754 YTHDC1Q96MU7 727 aaKnown RBP23.61■■□□□ 1.37
TGFBR2-201ENST00000295754 ATP1B4Q9UN42 357 aaPredicted RBP23.57■■□□□ 1.36
TGFBR2-201ENST00000295754 NEFLP07196 543 aa23.36■■□□□ 1.33
TGFBR2-201ENST00000295754 RSF1Q96T23 1441 aaPredicted RBP23.05■■□□□ 1.28
TGFBR2-201ENST00000295754 ITGAEP38570 1179 aa23.04■■□□□ 1.28
TGFBR2-201ENST00000295754 CECR2Q9BXF3 1484 aa22.99■■□□□ 1.27
TGFBR2-201ENST00000295754 RB1CC1Q8TDY2 1594 aa22.99■■□□□ 1.27
TGFBR2-201ENST00000295754 HNRNPUL2Q1KMD3 747 aaKnown RBP22.95■■□□□ 1.26
TGFBR2-201ENST00000295754 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
TGFBR2-201ENST00000295754 NACADO15069 1562 aa22.91■■□□□ 1.26
TGFBR2-201ENST00000295754 MYO15BQ96JP2 1530 aa22.85■■□□□ 1.25
TGFBR2-201ENST00000295754 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
TGFBR2-201ENST00000295754 GTF3C3Q9Y5Q9 886 aa22.82■■□□□ 1.24
TGFBR2-201ENST00000295754 DCAF1Q9Y4B6 1507 aa22.81■■□□□ 1.24
TGFBR2-201ENST00000295754 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
TGFBR2-201ENST00000295754 P3H3Q8IVL6 736 aa22.71■■□□□ 1.23
TGFBR2-201ENST00000295754 FBLN2P98095 1184 aa22.62■■□□□ 1.21
TGFBR2-201ENST00000295754 MROH2BQ7Z745 1585 aa22.6■■□□□ 1.21
TGFBR2-201ENST00000295754 ARID3CA6NKF2 412 aa22.58■■□□□ 1.21
TGFBR2-201ENST00000295754 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
TGFBR2-201ENST00000295754 DAXXQ9UER7 740 aaPredicted RBP22.46■■□□□ 1.19
TGFBR2-201ENST00000295754 FAM50AQ14320 339 aaKnown RBP22.45■■□□□ 1.18
TGFBR2-201ENST00000295754 BAZ1AQ9NRL2 1556 aaPredicted RBP22.41■■□□□ 1.18
TGFBR2-201ENST00000295754 BAZ1BQ9UIG0 1483 aaKnown RBP22.41■■□□□ 1.18
TGFBR2-201ENST00000295754 RTL5Q5HYW3 569 aaPredicted RBP22.38■■□□□ 1.17
TGFBR2-201ENST00000295754 BCANQ96GW7 911 aa22.35■■□□□ 1.17
TGFBR2-201ENST00000295754 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.17
TGFBR2-201ENST00000295754 WIZO95785 1651 aa22.31■■□□□ 1.16
TGFBR2-201ENST00000295754 POLR3GLQ9BT43 218 aa22.27■■□□□ 1.16
TGFBR2-201ENST00000295754 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
TGFBR2-201ENST00000295754 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
TGFBR2-201ENST00000295754 CCDC88BA6NC98 1476 aa22.24■■□□□ 1.15
TGFBR2-201ENST00000295754 SCAF1Q9H7N4 1312 aaKnown RBP22.22■■□□□ 1.15
TGFBR2-201ENST00000295754 CNGB1Q14028 1251 aaPredicted RBP22.2■■□□□ 1.14
TGFBR2-201ENST00000295754 ABCC8Q09428 1581 aa22.19■■□□□ 1.14
TGFBR2-201ENST00000295754 SOGA1O94964 1423 aa22.17■■□□□ 1.14
TGFBR2-201ENST00000295754 NEUROD1Q13562 356 aa22.15■■□□□ 1.14
TGFBR2-201ENST00000295754 CDK11AQ9UQ88 783 aaPredicted RBP22.1■■□□□ 1.13
TGFBR2-201ENST00000295754 TRIM52Q96A61 297 aa22.05■■□□□ 1.12
TGFBR2-201ENST00000295754 CEP162Q5TB80 1403 aa22■■□□□ 1.11
TGFBR2-201ENST00000295754 ANP32CO43423 234 aa22■■□□□ 1.11
TGFBR2-201ENST00000295754 CLIP1P30622 1438 aa22■■□□□ 1.11
TGFBR2-201ENST00000295754 ZNF777Q9ULD5 760 aaPredicted RBP21.96■■□□□ 1.11
TGFBR2-201ENST00000295754 CLSPNQ9HAW4 1339 aa21.94■■□□□ 1.1
TGFBR2-201ENST00000295754 ATAD2BQ9ULI0 1458 aa21.92■■□□□ 1.1
TGFBR2-201ENST00000295754 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
TGFBR2-201ENST00000295754 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
TGFBR2-201ENST00000295754 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
TGFBR2-201ENST00000295754 CHMP7Q8WUX9 453 aaPredicted RBP21.84■■□□□ 1.09
TGFBR2-201ENST00000295754 CHIC2Q9UKJ5 165 aa21.84■■□□□ 1.09
TGFBR2-201ENST00000295754 KIF27Q86VH2 1401 aa21.81■■□□□ 1.08
TGFBR2-201ENST00000295754 RUSC2Q8N2Y8 1516 aa21.81■■□□□ 1.08
TGFBR2-201ENST00000295754 ZNF326Q5BKZ1 582 aaKnown RBP21.81■■□□□ 1.08
TGFBR2-201ENST00000295754 SMARCA2P51531 1590 aa21.81■■□□□ 1.08
TGFBR2-201ENST00000295754 FKBP8Q14318 412 aa21.8■■□□□ 1.08
TGFBR2-201ENST00000295754 TNIKQ9UKE5 1360 aa21.78■■□□□ 1.08
TGFBR2-201ENST00000295754 EEA1Q15075 1411 aa21.77■■□□□ 1.08
TGFBR2-201ENST00000295754 CUX2O14529 1486 aa21.76■■□□□ 1.07
TGFBR2-201ENST00000295754 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
TGFBR2-201ENST00000295754 TDRD9Q8NDG6 1382 aaKnown RBP21.71■■□□□ 1.07
TGFBR2-201ENST00000295754 ANP32AP39687 249 aaKnown RBP21.7■■□□□ 1.06
TGFBR2-201ENST00000295754 ERCC6Q03468 1493 aa21.64■■□□□ 1.05
TGFBR2-201ENST00000295754 CARMIL1Q5VZK9 1371 aa21.64■■□□□ 1.05
TGFBR2-201ENST00000295754 MIER1Q8N108 512 aa21.63■■□□□ 1.05
TGFBR2-201ENST00000295754 MTUS2Q5JR59 1369 aa21.63■■□□□ 1.05
TGFBR2-201ENST00000295754 CADPSQ9ULU8 1353 aa21.63■■□□□ 1.05
TGFBR2-201ENST00000295754 DNAJC5BQ9UF47 199 aa21.59■■□□□ 1.05
TGFBR2-201ENST00000295754 KANK4Q5T7N3 995 aaPredicted RBP21.58■■□□□ 1.05
TGFBR2-201ENST00000295754 RRP7BPQ9NSQ0 103 aa21.56■■□□□ 1.04
TGFBR2-201ENST00000295754 HIRIP3Q9BW71 556 aaPredicted RBP21.55■■□□□ 1.04
TGFBR2-201ENST00000295754 EIF5BO60841 1220 aaKnown RBP21.53■■□□□ 1.04
TGFBR2-201ENST00000295754 KCNH8Q96L42 1107 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms