Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 KARS-204ENST00000564578 1942 ntTSL 512.26□□□□□ -0.451e-6■■□□□ 13.8
RPS3P23396 KARS-202ENST00000319410 2421 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.911e-6■■□□□ 13.8
RPS3P23396 KARS-209ENST00000568378 459 ntTSL 5 BASIC8.73□□□□□ -1.011e-6■■□□□ 13.8
RPS3P23396 AGRN-208ENST00000479707 584 ntTSL 318.42■□□□□ 0.543e-17■■□□□ 13.8
RPS3P23396 LARS-207ENST00000506231 3707 ntTSL 25.16□□□□□ -1.584e-7■■□□□ 13.8
RPS3P23396 GTSF1-202ENST00000546575 458 ntTSL 24.32□□□□□ -1.721e-21■■□□□ 13.8
RPS3P23396 CLTC-209ENST00000498711 2941 ntTSL 1 (best)3.8□□□□□ -1.82e-11■■□□□ 13.8
RPS3P23396 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.03■□□□□ 0.168e-8■■□□□ 13.8
RPS3P23396 MPP1-218ENST00000494170 969 ntTSL 314.42□□□□□ -0.16e-12■■□□□ 13.8
RPS3P23396 MPP1-210ENST00000462825 587 ntTSL 413.25□□□□□ -0.296e-12■■□□□ 13.8
RPS3P23396 MPP1-209ENST00000453245 729 ntTSL 512.05□□□□□ -0.486e-12■■□□□ 13.8
RPS3P23396 MPP1-203ENST00000393529 794 ntTSL 58.3□□□□□ -1.086e-12■■□□□ 13.8
RPS3P23396 P4HB-215ENST00000571507 493 ntTSL 25.26□□□□□ -1.573e-22■■□□□ 13.8
RPS3P23396 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.853e-6■■□□□ 13.8
RPS3P23396 NELFE-208ENST00000481121 1543 ntTSL 220.27■□□□□ 0.833e-6■■□□□ 13.8
RPS3P23396 NELFE-211ENST00000492185 1786 ntTSL 219.85■□□□□ 0.773e-6■■□□□ 13.8
RPS3P23396 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.663e-6■■□□□ 13.8
RPS3P23396 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.223e-6■■□□□ 13.8
RPS3P23396 NELFE-209ENST00000488426 1855 ntTSL 512.6□□□□□ -0.393e-6■■□□□ 13.8
RPS3P23396 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.627e-9■■□□□ 13.8
RPS3P23396 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.497e-9■■□□□ 13.8
RPS3P23396 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.47e-9■■□□□ 13.8
RPS3P23396 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.287e-9■■□□□ 13.8
RPS3P23396 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.74■□□□□ 0.277e-9■■□□□ 13.8
RPS3P23396 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.59■□□□□ 0.257e-9■■□□□ 13.8
RPS3P23396 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.22■□□□□ 0.197e-9■■□□□ 13.8
RPS3P23396 EWSR1-216ENST00000479135 7285 ntTSL 1 (best)10.9□□□□□ -0.667e-9■■□□□ 13.8
RPS3P23396 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC9.22□□□□□ -0.935e-14■■□□□ 13.8
RPS3P23396 FTH1-209ENST00000533138 885 ntTSL 510.96□□□□□ -0.653e-9■■□□□ 13.8
RPS3P23396 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.19■□□□□ 0.025e-7■■□□□ 13.8
RPS3P23396 MARS-204ENST00000545888 2979 ntTSL 514.3□□□□□ -0.125e-7■■□□□ 13.8
RPS3P23396 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.165e-7■■□□□ 13.8
RPS3P23396 MARS-203ENST00000537638 3592 ntTSL 213.3□□□□□ -0.285e-7■■□□□ 13.8
RPS3P23396 KARS-207ENST00000566560 1231 ntTSL 1 (best)11.3□□□□□ -0.63e-11■■□□□ 13.8
RPS3P23396 KARS-203ENST00000562875 801 ntTSL 37.78□□□□□ -1.163e-11■■□□□ 13.8
RPS3P23396 KARS-206ENST00000566249 649 ntTSL 53.33□□□□□ -1.883e-11■■□□□ 13.8
RPS3P23396 SHMT2-211ENST00000554310 579 ntTSL 412.7□□□□□ -0.386e-7■■□□□ 13.8
RPS3P23396 SHMT2-209ENST00000553949 552 ntTSL 312.06□□□□□ -0.486e-7■■□□□ 13.8
RPS3P23396 SHMT2-230ENST00000557427 569 ntTSL 411.89□□□□□ -0.516e-7■■□□□ 13.8
RPS3P23396 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.74■■□□□ 1.071e-9■■□□□ 13.8
RPS3P23396 TMEM161A-204ENST00000587096 1065 ntTSL 518.05■□□□□ 0.482e-7■■□□□ 13.8
RPS3P23396 TMEM161A-208ENST00000587925 582 ntTSL 315.39■□□□□ 0.052e-7■■□□□ 13.8
RPS3P23396 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.482e-6■■□□□ 13.8
RPS3P23396 SF3B3-202ENST00000562722 881 ntTSL 212.37□□□□□ -0.434e-7■■□□□ 13.8
RPS3P23396 FSCN1-204ENST00000447103 713 ntTSL 418.29■□□□□ 0.523e-10■■□□□ 13.8
RPS3P23396 FSCN1-202ENST00000405801 550 ntTSL 418.2■□□□□ 0.53e-10■■□□□ 13.8
RPS3P23396 FSCN1-203ENST00000444748 580 ntTSL 317.21■□□□□ 0.353e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-207ENST00000578134 831 ntTSL 316.83■□□□□ 0.283e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-218ENST00000580391 1957 ntTSL 514.7□□□□□ -0.063e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.073e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-236ENST00000584991 1862 ntTSL 514.61□□□□□ -0.073e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-237ENST00000585163 2519 ntTSL 1 (best)13.92□□□□□ -0.183e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-219ENST00000580670 1768 ntTSL 513.71□□□□□ -0.223e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC12.61□□□□□ -0.393e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-217ENST00000580287 2609 ntTSL 1 (best)12.42□□□□□ -0.423e-10■■□□□ 13.8
RPS3P23396 AC018521.1-202ENST00000641877 2655 ntBASIC12.33□□□□□ -0.443e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-212ENST00000579175 867 ntTSL 311.92□□□□□ -0.53e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-232ENST00000584168 2684 ntTSL 511.59□□□□□ -0.553e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-231ENST00000584063 2759 ntTSL 1 (best)11.01□□□□□ -0.653e-10■■□□□ 13.8
RPS3P23396 CDK5RAP3-227ENST00000583352 901 ntTSL 39.21□□□□□ -0.943e-10■■□□□ 13.8
RPS3P23396 DYNC1H1-208ENST00000556139 763 ntTSL 313.96□□□□□ -0.179e-7■■□□□ 13.8
RPS3P23396 RPS10-205ENST00000480942 734 ntTSL 211.07□□□□□ -0.645e-23■■□□□ 13.7
RPS3P23396 RACK1-222ENST00000509535 456 ntTSL 38.24□□□□□ -1.091e-25■■□□□ 13.7
RPS3P23396 ABCB6-205ENST00000448398 882 ntTSL 517.64■□□□□ 0.418e-7■■□□□ 13.7
RPS3P23396 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.36■■□□□ 1.019e-9■■□□□ 13.7
RPS3P23396 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.559e-9■■□□□ 13.7
RPS3P23396 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.299e-9■■□□□ 13.7
RPS3P23396 ETFA-205ENST00000558803 447 ntTSL 26.37□□□□□ -1.392e-7■■□□□ 13.7
RPS3P23396 HSPA9-205ENST00000505110 518 ntTSL 414.57□□□□□ -0.089e-9■■□□□ 13.7
RPS3P23396 HSPA9-208ENST00000507115 663 ntTSL 39.64□□□□□ -0.879e-9■■□□□ 13.7
RPS3P23396 THRAP3-204ENST00000478853 380 ntAPPRIS ALT2 TSL 215.51■□□□□ 0.071e-7■■□□□ 13.7
RPS3P23396 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.354e-12■■□□□ 13.7
RPS3P23396 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC12.84□□□□□ -0.354e-12■■□□□ 13.7
RPS3P23396 NME2-203ENST00000485076 554 ntTSL 1 (best)16.79■□□□□ 0.281e-8■■□□□ 13.7
RPS3P23396 ACADVL-237ENST00000583858 1015 ntTSL 518.19■□□□□ 0.51e-7■■□□□ 13.7
RPS3P23396 ACADVL-236ENST00000583850 903 ntTSL 217.63■□□□□ 0.411e-7■■□□□ 13.7
RPS3P23396 ACADVL-204ENST00000542255 1016 ntTSL 516.36■□□□□ 0.211e-7■■□□□ 13.7
RPS3P23396 ACADVL-214ENST00000578711 1732 nt16.23■□□□□ 0.191e-7■■□□□ 13.7
RPS3P23396 ACADVL-219ENST00000579425 1234 ntTSL 514.55□□□□□ -0.081e-7■■□□□ 13.7
RPS3P23396 ACADVL-215ENST00000578809 709 ntTSL 213.11□□□□□ -0.311e-7■■□□□ 13.7
RPS3P23396 ACADVL-211ENST00000578319 718 ntTSL 312.45□□□□□ -0.421e-7■■□□□ 13.7
RPS3P23396 CLU-217ENST00000560566 1039 ntTSL 413.25□□□□□ -0.295e-13■■□□□ 13.7
RPS3P23396 YARS-208ENST00000487404 2197 ntTSL 210.57□□□□□ -0.726e-17■■□□□ 13.7
RPS3P23396 ALB-213ENST00000508932 369 ntTSL 30.14□□□□□ -2.391e-323■■□□□ 13.7
RPS3P23396 ELP2-218ENST00000541748 674 ntTSL 213.8□□□□□ -0.23e-10■■□□□ 13.7
RPS3P23396 ELP2-227ENST00000545302 635 ntTSL 212.8□□□□□ -0.363e-10■■□□□ 13.7
RPS3P23396 ELP2-209ENST00000536830 636 ntTSL 211.75□□□□□ -0.533e-10■■□□□ 13.7
RPS3P23396 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC9.74□□□□□ -0.853e-10■■□□□ 13.7
RPS3P23396 SRSF5-202ENST00000553369 613 ntTSL 29.74□□□□□ -0.853e-10■■□□□ 13.7
RPS3P23396 SRSF5-218ENST00000557435 622 ntTSL 29.2□□□□□ -0.943e-10■■□□□ 13.7
RPS3P23396 SRSF5-219ENST00000557460 939 ntTSL 58.71□□□□□ -1.023e-10■■□□□ 13.7
RPS3P23396 VAT1-209ENST00000592388 478 ntTSL 57□□□□□ -1.293e-10■■□□□ 13.7
RPS3P23396 SF3B1-207ENST00000468925 510 ntTSL 24.69□□□□□ -1.663e-10■■□□□ 13.7
RPS3P23396 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.493e-8■■□□□ 13.7
RPS3P23396 RAVER1-204ENST00000592208 4693 ntTSL 1 (best)14.09□□□□□ -0.153e-8■■□□□ 13.7
RPS3P23396 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.273e-8■■□□□ 13.7
RPS3P23396 RAVER1-201ENST00000293677 3595 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.523e-8■■□□□ 13.7
RPS3P23396 RAVER1-208ENST00000617231 3501 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.713e-8■■□□□ 13.7
RPS3P23396 CLTC-205ENST00000472651 665 ntTSL 24.95□□□□□ -1.622e-7■■□□□ 13.7
RPS3P23396 FDPS-208ENST00000470171 746 ntTSL 215.06■□□□□ 01e-7■■□□□ 13.7
Retrieved 100 of 24,271 protein–RNA pairs in 142.8 ms