RNA–Protein interactions for RNA: ENST00000405801.2

FSCN1-202, Transcript of fascin actin-bundling protein 1, humanhuman

TSL 4

Gene FSCN1, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN1-202ENST00000405801 NISCHQ9Y2I1 1504 aa46.23■■■■■ 4.99
FSCN1-202ENST00000405801 CCDC180Q9P1Z9 1646 aa41.45■■■■■ 4.23
FSCN1-202ENST00000405801 ABCC9O60706 1549 aa41.13■■■■■ 4.18
FSCN1-202ENST00000405801 RB1CC1Q8TDY2 1594 aa39.29■■■■□ 3.88
FSCN1-202ENST00000405801 NACADO15069 1562 aa39.08■■■■□ 3.85
FSCN1-202ENST00000405801 DCAF8L2P0C7V8 631 aa38.78■■■■□ 3.8
FSCN1-202ENST00000405801 MYO15BQ96JP2 1530 aa38.63■■■■□ 3.77
FSCN1-202ENST00000405801 UNC13AQ9UPW8 1703 aa38.46■■■■□ 3.75
FSCN1-202ENST00000405801 ZCCHC6Q5VYS8 1495 aaKnown RBP38.4■■■■□ 3.74
FSCN1-202ENST00000405801 DNAJC5BQ9UF47 199 aa38.31■■■■□ 3.72
FSCN1-202ENST00000405801 PABPN1Q86U42 306 aaKnown RBP eCLIP38.27■■■■□ 3.72
FSCN1-202ENST00000405801 DCAF1Q9Y4B6 1507 aa38.22■■■■□ 3.71
FSCN1-202ENST00000405801 BICRAQ9NZM4 1560 aa38.16■■■■□ 3.7
FSCN1-202ENST00000405801 SCRIBQ14160 1630 aa37.76■■■■□ 3.63
FSCN1-202ENST00000405801 SHROOM4Q9ULL8 1493 aa37.67■■■■□ 3.62
FSCN1-202ENST00000405801 CC2D2AQ9P2K1 1620 aa37.2■■■■□ 3.55
FSCN1-202ENST00000405801 EIF4G1Q04637 1599 aaKnown RBP37.19■■■■□ 3.54
FSCN1-202ENST00000405801 CECR2Q9BXF3 1484 aa37.03■■■■□ 3.52
FSCN1-202ENST00000405801 SMARCA4P51532 1647 aa36.05■■■■□ 3.36
FSCN1-202ENST00000405801 NCAPD3P42695 1498 aa36.04■■■■□ 3.36
FSCN1-202ENST00000405801 ATAD2BQ9ULI0 1458 aa35.98■■■■□ 3.35
FSCN1-202ENST00000405801 SMARCA2P51531 1590 aa35.91■■■■□ 3.34
FSCN1-202ENST00000405801 BAZ1AQ9NRL2 1556 aaPredicted RBP35.88■■■■□ 3.33
FSCN1-202ENST00000405801 HMGXB3Q12766 1538 aa35.86■■■■□ 3.33
FSCN1-202ENST00000405801 PEG3Q9GZU2 1588 aa35.7■■■■□ 3.31
FSCN1-202ENST00000405801 BAZ1BQ9UIG0 1483 aaKnown RBP35.65■■■■□ 3.3
FSCN1-202ENST00000405801 MROH2BQ7Z745 1585 aa35.63■■■■□ 3.29
FSCN1-202ENST00000405801 ERCC6Q03468 1493 aa35.49■■■■□ 3.27
FSCN1-202ENST00000405801 NESP48681 1621 aa35.42■■■■□ 3.26
FSCN1-202ENST00000405801 CUX2O14529 1486 aa35.37■■■■□ 3.25
FSCN1-202ENST00000405801 LAMC3Q9Y6N6 1575 aa35.23■■■■□ 3.23
FSCN1-202ENST00000405801 WIZO95785 1651 aa35.23■■■■□ 3.23
FSCN1-202ENST00000405801 THOC2Q8NI27 1593 aaKnown RBP35.08■■■■□ 3.21
FSCN1-202ENST00000405801 KIF21AQ7Z4S6 1674 aa35.03■■■■□ 3.2
FSCN1-202ENST00000405801 DNAJC5Q9H3Z4 198 aa34.99■■■■□ 3.19
FSCN1-202ENST00000405801 PDS5BQ9NTI5 1447 aa34.97■■■■□ 3.19
FSCN1-202ENST00000405801 RSF1Q96T23 1441 aaPredicted RBP34.96■■■■□ 3.19
FSCN1-202ENST00000405801 CADPSQ9ULU8 1353 aa34.94■■■■□ 3.18
FSCN1-202ENST00000405801 TOP2AP11388 1531 aaKnown RBP34.81■■■■□ 3.16
FSCN1-202ENST00000405801 MRC2Q9UBG0 1479 aa34.7■■■■□ 3.15
FSCN1-202ENST00000405801 WDR62O43379 1518 aa34.62■■■■□ 3.13
FSCN1-202ENST00000405801 CFTRP13569 1480 aa34.62■■■■□ 3.13
FSCN1-202ENST00000405801 CEP164Q9UPV0 1460 aa34.6■■■■□ 3.13
FSCN1-202ENST00000405801 FANCD2Q9BXW9 1451 aa34.57■■■■□ 3.12
FSCN1-202ENST00000405801 PRDM2Q13029 1718 aa34.39■■■■□ 3.1
FSCN1-202ENST00000405801 CCDC88BA6NC98 1476 aa34.37■■■■□ 3.09
FSCN1-202ENST00000405801 URB2Q14146 1524 aaKnown RBP34.3■■■■□ 3.08
FSCN1-202ENST00000405801 TOPBP1Q92547 1522 aa33.95■■■■□ 3.03
FSCN1-202ENST00000405801 IFT140Q96RY7 1462 aa33.88■■■■□ 3.01
FSCN1-202ENST00000405801 DNMBPQ6XZF7 1577 aa33.88■■■■□ 3.01
FSCN1-202ENST00000405801 ABCC8Q09428 1581 aa33.87■■■■□ 3.01
FSCN1-202ENST00000405801 ZNF608Q9ULD9 1512 aaPredicted RBP33.82■■■■□ 3
FSCN1-202ENST00000405801 SUPT5HO00267 1087 aaKnown RBP33.75■■■□□ 2.99
FSCN1-202ENST00000405801 OSCARQ8IYS5 282 aa33.7■■■□□ 2.99
FSCN1-202ENST00000405801 EIF4G3O43432 1585 aaKnown RBP33.69■■■□□ 2.98
FSCN1-202ENST00000405801 TARBP1Q13395 1621 aaKnown RBP33.67■■■□□ 2.98
FSCN1-202ENST00000405801 POLA1P09884 1462 aaPredicted RBP33.63■■■□□ 2.97
FSCN1-202ENST00000405801 TRIM41Q8WV44 630 aa33.56■■■□□ 2.96
FSCN1-202ENST00000405801 AQRO60306 1485 aaKnown RBP eCLIP33.51■■■□□ 2.962e-6■■■□□ 16.7
FSCN1-202ENST00000405801 RAD54L2Q9Y4B4 1467 aa33.48■■■□□ 2.95
FSCN1-202ENST00000405801 CUX1P39880 1505 aa33.48■■■□□ 2.95
FSCN1-202ENST00000405801 FGD5Q6ZNL6 1462 aa33.45■■■□□ 2.95
FSCN1-202ENST00000405801 SOGA1O94964 1423 aa33.43■■■□□ 2.94
FSCN1-202ENST00000405801 CHD1O14646 1710 aa33.41■■■□□ 2.94
FSCN1-202ENST00000405801 WDR97A6NE52 1622 aa33.35■■■□□ 2.93
FSCN1-202ENST00000405801 RIMBP3CA6NJZ7 1639 aa33.35■■■□□ 2.93
FSCN1-202ENST00000405801 RIMBP3BA6NNM3 1639 aa33.35■■■□□ 2.93
FSCN1-202ENST00000405801 RIMBP3Q9UFD9 1639 aa33.35■■■□□ 2.93
FSCN1-202ENST00000405801 TDRD9Q8NDG6 1382 aaKnown RBP33.33■■■□□ 2.93
FSCN1-202ENST00000405801 ARHGEF11O15085 1522 aa33.26■■■□□ 2.91
FSCN1-202ENST00000405801 SNAPC4Q5SXM2 1469 aa33.22■■■□□ 2.91
FSCN1-202ENST00000405801 FBLN2P98095 1184 aa33.18■■■□□ 2.9
FSCN1-202ENST00000405801 GRIN2BQ13224 1484 aa33.15■■■□□ 2.9
FSCN1-202ENST00000405801 MAGI1Q96QZ7 1491 aaPredicted RBP33.13■■■□□ 2.89
FSCN1-202ENST00000405801 PBRM1Q86U86 1689 aa33.1■■■□□ 2.89
FSCN1-202ENST00000405801 ABCA10Q8WWZ4 1543 aa33.08■■■□□ 2.89
FSCN1-202ENST00000405801 ABCA5Q8WWZ7 1642 aa33.06■■■□□ 2.88
FSCN1-202ENST00000405801 GAPVD1Q14C86 1478 aa33.05■■■□□ 2.88
FSCN1-202ENST00000405801 BIVM-ERCC5R4GMW8 1640 aa33.04■■■□□ 2.88
FSCN1-202ENST00000405801 SYNJ2O15056 1496 aa33.02■■■□□ 2.88
FSCN1-202ENST00000405801 TOP2BQ02880 1626 aa33.02■■■□□ 2.88
FSCN1-202ENST00000405801 CLASP1Q7Z460 1538 aa33.01■■■□□ 2.87
FSCN1-202ENST00000405801 CHMP7Q8WUX9 453 aaPredicted RBP32.99■■■□□ 2.87
FSCN1-202ENST00000405801 SYNJ1O43426 1573 aa32.99■■■□□ 2.87
FSCN1-202ENST00000405801 WRNQ14191 1432 aaPredicted RBP eCLIP32.97■■■□□ 2.872e-7■■■□□ 18.1
FSCN1-202ENST00000405801 ARAP1Q96P48 1450 aa32.95■■■□□ 2.87
FSCN1-202ENST00000405801 CYB5RLQ6IPT4 315 aa32.89■■■□□ 2.86
FSCN1-202ENST00000405801 ADAMTS12P58397 1594 aa32.79■■■□□ 2.84
FSCN1-202ENST00000405801 GRIN2AQ12879 1464 aa32.74■■■□□ 2.83
FSCN1-202ENST00000405801 ERICH3Q5RHP9 1530 aa32.68■■■□□ 2.82
FSCN1-202ENST00000405801 FHAD1B1AJZ9 1412 aa32.64■■■□□ 2.82
FSCN1-202ENST00000405801 CEP170Q5SW79 1584 aa32.63■■■□□ 2.81
FSCN1-202ENST00000405801 NUP160Q12769 1436 aa32.61■■■□□ 2.81
FSCN1-202ENST00000405801 ERCC6L2Q5T890 1561 aa32.5■■■□□ 2.79
FSCN1-202ENST00000405801 SHROOM2Q13796 1616 aa32.48■■■□□ 2.79
FSCN1-202ENST00000405801 TRHP20396 242 aaPredicted RBP32.45■■■□□ 2.79
FSCN1-202ENST00000405801 RUSC2Q8N2Y8 1516 aa32.34■■■□□ 2.77
FSCN1-202ENST00000405801 KIF27Q86VH2 1401 aa32.32■■■□□ 2.76
FSCN1-202ENST00000405801 CUL7Q14999 1698 aa32.28■■■□□ 2.76
FSCN1-202ENST00000405801 IGF1RP08069 1367 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms