RNA–Protein interactions for RNA: ENST00000332050.10

EWSR1-203, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene EWSR1, Length 2,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-203ENST00000332050 NISCHQ9Y2I1 1504 aa36.55■■■■□ 3.44
EWSR1-203ENST00000332050 CCDC180Q9P1Z9 1646 aa31.39■■■□□ 2.62
EWSR1-203ENST00000332050 ZCCHC6Q5VYS8 1495 aaKnown RBP30.83■■■□□ 2.53
EWSR1-203ENST00000332050 SHROOM4Q9ULL8 1493 aa30.75■■■□□ 2.51
EWSR1-203ENST00000332050 DCAF8L2P0C7V8 631 aa30.37■■■□□ 2.45
EWSR1-203ENST00000332050 DCAF1Q9Y4B6 1507 aa30.02■■■□□ 2.4
EWSR1-203ENST00000332050 SUPT5HO00267 1087 aaKnown RBP29.9■■■□□ 2.38
EWSR1-203ENST00000332050 ABCC9O60706 1549 aa29.41■■■□□ 2.3
EWSR1-203ENST00000332050 MYO15BQ96JP2 1530 aa29.34■■■□□ 2.29
EWSR1-203ENST00000332050 SCRIBQ14160 1630 aa29.29■■■□□ 2.28
EWSR1-203ENST00000332050 NACADO15069 1562 aa29.1■■■□□ 2.25
EWSR1-203ENST00000332050 CHIC1Q5VXU3 224 aa28.83■■■□□ 2.21
EWSR1-203ENST00000332050 RB1CC1Q8TDY2 1594 aa28.74■■■□□ 2.19
EWSR1-203ENST00000332050 RSF1Q96T23 1441 aaPredicted RBP28.7■■■□□ 2.19
EWSR1-203ENST00000332050 CECR2Q9BXF3 1484 aa28.51■■■□□ 2.15
EWSR1-203ENST00000332050 MROH2BQ7Z745 1585 aa28.38■■■□□ 2.13
EWSR1-203ENST00000332050 UNC13AQ9UPW8 1703 aa28.31■■■□□ 2.12
EWSR1-203ENST00000332050 WIZO95785 1651 aa28.22■■■□□ 2.11
EWSR1-203ENST00000332050 BAZ1AQ9NRL2 1556 aaPredicted RBP28.13■■■□□ 2.09
EWSR1-203ENST00000332050 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.078e-9■□□□□ 10.7
EWSR1-203ENST00000332050 SMARCA4P51532 1647 aa27.97■■■□□ 2.07
EWSR1-203ENST00000332050 BICRAQ9NZM4 1560 aa27.94■■■□□ 2.06
EWSR1-203ENST00000332050 LOC105371045A0A1W2PR82 267 aa27.93■■■□□ 2.06
EWSR1-203ENST00000332050 TRIM41Q8WV44 630 aa27.91■■■□□ 2.06
EWSR1-203ENST00000332050 TOP2AP11388 1531 aaKnown RBP27.79■■■□□ 2.04
EWSR1-203ENST00000332050 FAM9AQ8IZU1 332 aaPredicted RBP27.64■■■□□ 2.02
EWSR1-203ENST00000332050 EIF4G1Q04637 1599 aaKnown RBP27.64■■■□□ 2.01
EWSR1-203ENST00000332050 CCDC88BA6NC98 1476 aa27.62■■■□□ 2.01
EWSR1-203ENST00000332050 SMARCA2P51531 1590 aa27.61■■■□□ 2.01
EWSR1-203ENST00000332050 PEG3Q9GZU2 1588 aa27.45■■□□□ 1.99
EWSR1-203ENST00000332050 PCGF6Q9BYE7 350 aa27.42■■□□□ 1.98
EWSR1-203ENST00000332050 EHMT2Q96KQ7 1210 aa27.41■■□□□ 1.98
EWSR1-203ENST00000332050 ABCC8Q09428 1581 aa27.4■■□□□ 1.98
EWSR1-203ENST00000332050 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
EWSR1-203ENST00000332050 BAZ1BQ9UIG0 1483 aaKnown RBP27.26■■□□□ 1.95
EWSR1-203ENST00000332050 HRCP23327 699 aa27.07■■□□□ 1.92
EWSR1-203ENST00000332050 TRIM26Q12899 539 aaPredicted RBP27.03■■□□□ 1.92
EWSR1-203ENST00000332050 SOGA1O94964 1423 aa27.02■■□□□ 1.92
EWSR1-203ENST00000332050 WRNQ14191 1432 aaPredicted RBP eCLIP27■■□□□ 1.91
EWSR1-203ENST00000332050 SYNJ1O43426 1573 aa26.91■■□□□ 1.9
EWSR1-203ENST00000332050 RUSC2Q8N2Y8 1516 aa26.9■■□□□ 1.9
EWSR1-203ENST00000332050 HMGXB3Q12766 1538 aa26.89■■□□□ 1.89
EWSR1-203ENST00000332050 NCAPD3P42695 1498 aa26.89■■□□□ 1.89
EWSR1-203ENST00000332050 EEA1Q15075 1411 aa26.83■■□□□ 1.89
EWSR1-203ENST00000332050 CSRNP3Q8WYN3 585 aa26.8■■□□□ 1.88
EWSR1-203ENST00000332050 PPARGC1BQ86YN6 1023 aaKnown RBP26.71■■□□□ 1.87
EWSR1-203ENST00000332050 CEP162Q5TB80 1403 aa26.68■■□□□ 1.86
EWSR1-203ENST00000332050 UBTFP17480 764 aaKnown RBP26.66■■□□□ 1.86
EWSR1-203ENST00000332050 TNIKQ9UKE5 1360 aa26.66■■□□□ 1.86
EWSR1-203ENST00000332050 GOLGA3Q08378 1498 aa26.63■■□□□ 1.85
EWSR1-203ENST00000332050 TOP2BQ02880 1626 aa26.63■■□□□ 1.85
EWSR1-203ENST00000332050 BIVM-ERCC5R4GMW8 1640 aa26.56■■□□□ 1.84
EWSR1-203ENST00000332050 CFTRP13569 1480 aa26.54■■□□□ 1.84
EWSR1-203ENST00000332050 CEP164Q9UPV0 1460 aa26.53■■□□□ 1.84
EWSR1-203ENST00000332050 KIF21BO75037 1637 aa26.52■■□□□ 1.84
EWSR1-203ENST00000332050 CC2D2AQ9P2K1 1620 aa26.51■■□□□ 1.83
EWSR1-203ENST00000332050 CUX1P39880 1505 aa26.47■■□□□ 1.83
EWSR1-203ENST00000332050 TTBK1Q5TCY1 1321 aaPredicted RBP26.41■■□□□ 1.82
EWSR1-203ENST00000332050 RAPGEF2Q9Y4G8 1499 aa26.4■■□□□ 1.82
EWSR1-203ENST00000332050 PRDM2Q13029 1718 aa26.39■■□□□ 1.82
EWSR1-203ENST00000332050 CADPSQ9ULU8 1353 aa26.33■■□□□ 1.81
EWSR1-203ENST00000332050 CLIP1P30622 1438 aa26.29■■□□□ 1.8
EWSR1-203ENST00000332050 RANGAP1P46060 587 aaPredicted RBP26.25■■□□□ 1.79
EWSR1-203ENST00000332050 KIF27Q86VH2 1401 aa26.22■■□□□ 1.79
EWSR1-203ENST00000332050 ZEB1P37275 1124 aaPredicted RBP26.21■■□□□ 1.79
EWSR1-203ENST00000332050 PRXQ9BXM0 1461 aa26.2■■□□□ 1.78
EWSR1-203ENST00000332050 ERICH3Q5RHP9 1530 aa26.18■■□□□ 1.78
EWSR1-203ENST00000332050 VPS8Q8N3P4 1428 aa26.11■■□□□ 1.77
EWSR1-203ENST00000332050 FANCD2Q9BXW9 1451 aa26.1■■□□□ 1.77
EWSR1-203ENST00000332050 FGD5Q6ZNL6 1462 aa26.08■■□□□ 1.77
EWSR1-203ENST00000332050 CUX2O14529 1486 aa26.07■■□□□ 1.76
EWSR1-203ENST00000332050 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.05■■□□□ 1.76
EWSR1-203ENST00000332050 NESP48681 1621 aa26.05■■□□□ 1.76
EWSR1-203ENST00000332050 CCER1Q8TC90 406 aaPredicted RBP25.97■■□□□ 1.75
EWSR1-203ENST00000332050 APLP2Q06481 763 aa25.97■■□□□ 1.75
EWSR1-203ENST00000332050 IGF1RP08069 1367 aa25.94■■□□□ 1.74
EWSR1-203ENST00000332050 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
EWSR1-203ENST00000332050 DNMBPQ6XZF7 1577 aa25.92■■□□□ 1.74
EWSR1-203ENST00000332050 TOPBP1Q92547 1522 aa25.88■■□□□ 1.73
EWSR1-203ENST00000332050 DNAJC5BQ9UF47 199 aa25.88■■□□□ 1.73
EWSR1-203ENST00000332050 LAMC3Q9Y6N6 1575 aa25.85■■□□□ 1.73
EWSR1-203ENST00000332050 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
EWSR1-203ENST00000332050 CARMIL1Q5VZK9 1371 aa25.84■■□□□ 1.73
EWSR1-203ENST00000332050 POLA1P09884 1462 aaPredicted RBP25.83■■□□□ 1.73
EWSR1-203ENST00000332050 ARHGAP35Q9NRY4 1499 aa25.79■■□□□ 1.72
EWSR1-203ENST00000332050 HNRNPUL2Q1KMD3 747 aaKnown RBP25.76■■□□□ 1.71
EWSR1-203ENST00000332050 ABCA10Q8WWZ4 1543 aa25.76■■□□□ 1.71
EWSR1-203ENST00000332050 URB2Q14146 1524 aaKnown RBP25.75■■□□□ 1.71
EWSR1-203ENST00000332050 PDS5BQ9NTI5 1447 aa25.68■■□□□ 1.7
EWSR1-203ENST00000332050 KANK4Q5T7N3 995 aaPredicted RBP25.68■■□□□ 1.7
EWSR1-203ENST00000332050 KIF21AQ7Z4S6 1674 aa25.66■■□□□ 1.7
EWSR1-203ENST00000332050 WDR97A6NE52 1622 aa25.61■■□□□ 1.69
EWSR1-203ENST00000332050 CUL7Q14999 1698 aa25.58■■□□□ 1.68
EWSR1-203ENST00000332050 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
EWSR1-203ENST00000332050 P3H3Q8IVL6 736 aa25.52■■□□□ 1.68
EWSR1-203ENST00000332050 ABCA5Q8WWZ7 1642 aa25.51■■□□□ 1.67
EWSR1-203ENST00000332050 GAPVD1Q14C86 1478 aa25.47■■□□□ 1.67
EWSR1-203ENST00000332050 CTTNBP2Q8WZ74 1663 aa25.46■■□□□ 1.67
EWSR1-203ENST00000332050 TIAM1Q13009 1591 aa25.44■■□□□ 1.66
EWSR1-203ENST00000332050 FHOD3Q2V2M9 1422 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 325 ms