RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 NISCHQ9Y2I1 1504 aa33.15■■■□□ 2.9
ZCCHC3-201ENST00000500893 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
ZCCHC3-201ENST00000500893 SUPT5HO00267 1087 aaKnown RBP28.96■■■□□ 2.23
ZCCHC3-201ENST00000500893 DCAF8L2P0C7V8 631 aa28.9■■■□□ 2.22
ZCCHC3-201ENST00000500893 ZCCHC6Q5VYS8 1495 aaKnown RBP27.93■■■□□ 2.06
ZCCHC3-201ENST00000500893 CHIC1Q5VXU3 224 aa27.66■■■□□ 2.02
ZCCHC3-201ENST00000500893 CCDC180Q9P1Z9 1646 aa27.64■■■□□ 2.02
ZCCHC3-201ENST00000500893 MYO15BQ96JP2 1530 aa27.4■■□□□ 1.98
ZCCHC3-201ENST00000500893 PCGF6Q9BYE7 350 aa27.34■■□□□ 1.97
ZCCHC3-201ENST00000500893 LOC105371045A0A1W2PR82 267 aa27.24■■□□□ 1.95
ZCCHC3-201ENST00000500893 EHMT2Q96KQ7 1210 aa27.08■■□□□ 1.93
ZCCHC3-201ENST00000500893 HRCP23327 699 aa26.95■■□□□ 1.91
ZCCHC3-201ENST00000500893 FAM9AQ8IZU1 332 aaPredicted RBP26.94■■□□□ 1.9
ZCCHC3-201ENST00000500893 PPARGC1BQ86YN6 1023 aaKnown RBP26.84■■□□□ 1.89
ZCCHC3-201ENST00000500893 DCAF1Q9Y4B6 1507 aa26.72■■□□□ 1.87
ZCCHC3-201ENST00000500893 TRIM41Q8WV44 630 aa26.71■■□□□ 1.87
ZCCHC3-201ENST00000500893 SCRIBQ14160 1630 aa26.69■■□□□ 1.86
ZCCHC3-201ENST00000500893 ABCC9O60706 1549 aa26.64■■□□□ 1.85
ZCCHC3-201ENST00000500893 RSF1Q96T23 1441 aaPredicted RBP26.46■■□□□ 1.83
ZCCHC3-201ENST00000500893 TRIM26Q12899 539 aaPredicted RBP26.39■■□□□ 1.81
ZCCHC3-201ENST00000500893 CECR2Q9BXF3 1484 aa26.18■■□□□ 1.78
ZCCHC3-201ENST00000500893 RB1CC1Q8TDY2 1594 aa26.17■■□□□ 1.78
ZCCHC3-201ENST00000500893 TTBK1Q5TCY1 1321 aaPredicted RBP26.14■■□□□ 1.78
ZCCHC3-201ENST00000500893 MROH2BQ7Z745 1585 aa25.95■■□□□ 1.75
ZCCHC3-201ENST00000500893 PABPN1Q86U42 306 aaKnown RBP eCLIP25.84■■□□□ 1.73
ZCCHC3-201ENST00000500893 NACADO15069 1562 aa25.82■■□□□ 1.72
ZCCHC3-201ENST00000500893 WIZO95785 1651 aa25.78■■□□□ 1.72
ZCCHC3-201ENST00000500893 ZEB1P37275 1124 aaPredicted RBP25.72■■□□□ 1.71
ZCCHC3-201ENST00000500893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.71■■□□□ 1.71
ZCCHC3-201ENST00000500893 CCER1Q8TC90 406 aaPredicted RBP25.64■■□□□ 1.7
ZCCHC3-201ENST00000500893 UBTFP17480 764 aaKnown RBP25.61■■□□□ 1.69
ZCCHC3-201ENST00000500893 RANGAP1P46060 587 aaPredicted RBP25.56■■□□□ 1.68
ZCCHC3-201ENST00000500893 ABCC8Q09428 1581 aa25.46■■□□□ 1.67
ZCCHC3-201ENST00000500893 BAZ1AQ9NRL2 1556 aaPredicted RBP25.43■■□□□ 1.66
ZCCHC3-201ENST00000500893 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
ZCCHC3-201ENST00000500893 SOGA1O94964 1423 aa25.33■■□□□ 1.65
ZCCHC3-201ENST00000500893 CSRNP3Q8WYN3 585 aa25.29■■□□□ 1.64
ZCCHC3-201ENST00000500893 RUSC2Q8N2Y8 1516 aa25.18■■□□□ 1.62
ZCCHC3-201ENST00000500893 CEP162Q5TB80 1403 aa25.17■■□□□ 1.62
ZCCHC3-201ENST00000500893 HNRNPUL2Q1KMD3 747 aaKnown RBP25.17■■□□□ 1.62
ZCCHC3-201ENST00000500893 TOP2AP11388 1531 aaKnown RBP25.16■■□□□ 1.62
ZCCHC3-201ENST00000500893 SMARCA4P51532 1647 aa25.16■■□□□ 1.62
ZCCHC3-201ENST00000500893 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
ZCCHC3-201ENST00000500893 APLP2Q06481 763 aa25.04■■□□□ 1.6
ZCCHC3-201ENST00000500893 SCAF1Q9H7N4 1312 aaKnown RBP25.02■■□□□ 1.6
ZCCHC3-201ENST00000500893 DIEXFQ68CQ4 756 aaKnown RBP25.01■■□□□ 1.59
ZCCHC3-201ENST00000500893 WRNQ14191 1432 aaPredicted RBP eCLIP24.97■■□□□ 1.59
ZCCHC3-201ENST00000500893 TNIKQ9UKE5 1360 aa24.96■■□□□ 1.59
ZCCHC3-201ENST00000500893 EIF4G1Q04637 1599 aaKnown RBP24.95■■□□□ 1.59
ZCCHC3-201ENST00000500893 YTHDC1Q96MU7 727 aaKnown RBP24.9■■□□□ 1.58
ZCCHC3-201ENST00000500893 UNC13AQ9UPW8 1703 aa24.88■■□□□ 1.57
ZCCHC3-201ENST00000500893 GOLGA3Q08378 1498 aa24.82■■□□□ 1.56
ZCCHC3-201ENST00000500893 NEUROD1Q13562 356 aa24.8■■□□□ 1.56
ZCCHC3-201ENST00000500893 EEA1Q15075 1411 aa24.77■■□□□ 1.56
ZCCHC3-201ENST00000500893 BAZ1BQ9UIG0 1483 aaKnown RBP24.75■■□□□ 1.55
ZCCHC3-201ENST00000500893 CLIP1P30622 1438 aa24.75■■□□□ 1.55
ZCCHC3-201ENST00000500893 BICRAQ9NZM4 1560 aa24.73■■□□□ 1.55
ZCCHC3-201ENST00000500893 ACIN1Q9UKV3 1341 aaKnown RBP24.71■■□□□ 1.55
ZCCHC3-201ENST00000500893 CENPBP07199 599 aaPredicted RBP24.69■■□□□ 1.54
ZCCHC3-201ENST00000500893 ATAD2BQ9ULI0 1458 aa24.67■■□□□ 1.54
ZCCHC3-201ENST00000500893 ITGAEP38570 1179 aa24.67■■□□□ 1.54
ZCCHC3-201ENST00000500893 ZNF316A6NFI3 1004 aaPredicted RBP24.66■■□□□ 1.54
ZCCHC3-201ENST00000500893 GTF3C3Q9Y5Q9 886 aa24.66■■□□□ 1.54
ZCCHC3-201ENST00000500893 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.53
ZCCHC3-201ENST00000500893 SYNJ1O43426 1573 aa24.64■■□□□ 1.53
ZCCHC3-201ENST00000500893 RAPGEF2Q9Y4G8 1499 aa24.61■■□□□ 1.53
ZCCHC3-201ENST00000500893 ATP1B4Q9UN42 357 aaPredicted RBP24.51■■□□□ 1.51
ZCCHC3-201ENST00000500893 MIER1Q8N108 512 aa24.47■■□□□ 1.51
ZCCHC3-201ENST00000500893 VPS8Q8N3P4 1428 aa24.46■■□□□ 1.51
ZCCHC3-201ENST00000500893 KANK4Q5T7N3 995 aaPredicted RBP24.43■■□□□ 1.5
ZCCHC3-201ENST00000500893 P3H3Q8IVL6 736 aa24.35■■□□□ 1.49
ZCCHC3-201ENST00000500893 PEG3Q9GZU2 1588 aa24.32■■□□□ 1.48
ZCCHC3-201ENST00000500893 PELP1Q8IZL8 1130 aaKnown RBP24.28■■□□□ 1.48
ZCCHC3-201ENST00000500893 KIF21BO75037 1637 aa24.28■■□□□ 1.48
ZCCHC3-201ENST00000500893 KIF27Q86VH2 1401 aa24.19■■□□□ 1.46
ZCCHC3-201ENST00000500893 FAM50AQ14320 339 aaKnown RBP24.17■■□□□ 1.46
ZCCHC3-201ENST00000500893 TOP2BQ02880 1626 aa24.14■■□□□ 1.45
ZCCHC3-201ENST00000500893 ARAP1Q96P48 1450 aa24.11■■□□□ 1.45
ZCCHC3-201ENST00000500893 CUX1P39880 1505 aa24.09■■□□□ 1.45
ZCCHC3-201ENST00000500893 CUX2O14529 1486 aa24.06■■□□□ 1.44
ZCCHC3-201ENST00000500893 PRXQ9BXM0 1461 aa24.06■■□□□ 1.44
ZCCHC3-201ENST00000500893 DHX57Q6P158 1386 aaKnown RBP24.04■■□□□ 1.44
ZCCHC3-201ENST00000500893 NCAPD3P42695 1498 aa24.03■■□□□ 1.44
ZCCHC3-201ENST00000500893 CCNB3Q8WWL7 1395 aa23.98■■□□□ 1.43
ZCCHC3-201ENST00000500893 HIRIP3Q9BW71 556 aaPredicted RBP23.94■■□□□ 1.42
ZCCHC3-201ENST00000500893 CARMIL1Q5VZK9 1371 aa23.93■■□□□ 1.42
ZCCHC3-201ENST00000500893 CFTRP13569 1480 aa23.92■■□□□ 1.42
ZCCHC3-201ENST00000500893 IGF1RP08069 1367 aa23.92■■□□□ 1.42
ZCCHC3-201ENST00000500893 ARHGAP35Q9NRY4 1499 aa23.91■■□□□ 1.42
ZCCHC3-201ENST00000500893 SIN3AQ96ST3 1273 aa23.91■■□□□ 1.42
ZCCHC3-201ENST00000500893 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.42
ZCCHC3-201ENST00000500893 BIVM-ERCC5R4GMW8 1640 aa23.88■■□□□ 1.41
ZCCHC3-201ENST00000500893 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
ZCCHC3-201ENST00000500893 HMGXB3Q12766 1538 aa23.84■■□□□ 1.41
ZCCHC3-201ENST00000500893 RAB3GAP2Q9H2M9 1393 aa23.83■■□□□ 1.41
ZCCHC3-201ENST00000500893 DDX10Q13206 875 aaKnown RBP23.8■■□□□ 1.4
ZCCHC3-201ENST00000500893 KCNH8Q96L42 1107 aa23.8■■□□□ 1.4
ZCCHC3-201ENST00000500893 CLSPNQ9HAW4 1339 aa23.8■■□□□ 1.4
ZCCHC3-201ENST00000500893 ARID3CA6NKF2 412 aa23.79■■□□□ 1.4
ZCCHC3-201ENST00000500893 FGD5Q6ZNL6 1462 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms