RNA–Protein interactions for RNA: ENST00000578134.5

CDK5RAP3-207, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 831 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-207ENST00000578134 NISCHQ9Y2I1 1504 aa39.43■■■■□ 3.9
CDK5RAP3-207ENST00000578134 CCDC180Q9P1Z9 1646 aa34.68■■■■□ 3.14
CDK5RAP3-207ENST00000578134 ABCC9O60706 1549 aa33.09■■■□□ 2.89
CDK5RAP3-207ENST00000578134 ZCCHC6Q5VYS8 1495 aaKnown RBP32.99■■■□□ 2.87
CDK5RAP3-207ENST00000578134 DCAF1Q9Y4B6 1507 aa32.74■■■□□ 2.83
CDK5RAP3-207ENST00000578134 DCAF8L2P0C7V8 631 aa32.64■■■□□ 2.82
CDK5RAP3-207ENST00000578134 MYO15BQ96JP2 1530 aa32.59■■■□□ 2.81
CDK5RAP3-207ENST00000578134 NACADO15069 1562 aa32.46■■■□□ 2.79
CDK5RAP3-207ENST00000578134 RB1CC1Q8TDY2 1594 aa32.28■■■□□ 2.76
CDK5RAP3-207ENST00000578134 SCRIBQ14160 1630 aa31.62■■■□□ 2.65
CDK5RAP3-207ENST00000578134 SHROOM4Q9ULL8 1493 aa31.56■■■□□ 2.64
CDK5RAP3-207ENST00000578134 UNC13AQ9UPW8 1703 aa31.41■■■□□ 2.62
CDK5RAP3-207ENST00000578134 BICRAQ9NZM4 1560 aa31.18■■■□□ 2.58
CDK5RAP3-207ENST00000578134 PABPN1Q86U42 306 aaKnown RBP eCLIP31.09■■■□□ 2.57
CDK5RAP3-207ENST00000578134 CECR2Q9BXF3 1484 aa30.57■■■□□ 2.48
CDK5RAP3-207ENST00000578134 BAZ1AQ9NRL2 1556 aaPredicted RBP30.53■■■□□ 2.48
CDK5RAP3-207ENST00000578134 SMARCA4P51532 1647 aa30.38■■■□□ 2.45
CDK5RAP3-207ENST00000578134 RSF1Q96T23 1441 aaPredicted RBP30.35■■■□□ 2.45
CDK5RAP3-207ENST00000578134 MROH2BQ7Z745 1585 aa30.35■■■□□ 2.45
CDK5RAP3-207ENST00000578134 EIF4G1Q04637 1599 aaKnown RBP30.32■■■□□ 2.45
CDK5RAP3-207ENST00000578134 SUPT5HO00267 1087 aaKnown RBP30.21■■■□□ 2.43
CDK5RAP3-207ENST00000578134 PEG3Q9GZU2 1588 aa30.13■■■□□ 2.41
CDK5RAP3-207ENST00000578134 SMARCA2P51531 1590 aa30.09■■■□□ 2.41
CDK5RAP3-207ENST00000578134 ATAD2BQ9ULI0 1458 aa30.06■■■□□ 2.4
CDK5RAP3-207ENST00000578134 WIZO95785 1651 aa30.04■■■□□ 2.4
CDK5RAP3-207ENST00000578134 CC2D2AQ9P2K1 1620 aa29.98■■■□□ 2.39
CDK5RAP3-207ENST00000578134 NCAPD3P42695 1498 aa29.96■■■□□ 2.39
CDK5RAP3-207ENST00000578134 BAZ1BQ9UIG0 1483 aaKnown RBP29.85■■■□□ 2.37
CDK5RAP3-207ENST00000578134 HMGXB3Q12766 1538 aa29.85■■■□□ 2.37
CDK5RAP3-207ENST00000578134 TOP2AP11388 1531 aaKnown RBP29.82■■■□□ 2.36
CDK5RAP3-207ENST00000578134 DNAJC5BQ9UF47 199 aa29.63■■■□□ 2.33
CDK5RAP3-207ENST00000578134 CCDC88BA6NC98 1476 aa29.49■■■□□ 2.31
CDK5RAP3-207ENST00000578134 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
CDK5RAP3-207ENST00000578134 CFTRP13569 1480 aa29.1■■■□□ 2.25
CDK5RAP3-207ENST00000578134 LAMC3Q9Y6N6 1575 aa29.01■■■□□ 2.23
CDK5RAP3-207ENST00000578134 PRDM2Q13029 1718 aa28.86■■■□□ 2.21
CDK5RAP3-207ENST00000578134 NESP48681 1621 aa28.85■■■□□ 2.21
CDK5RAP3-207ENST00000578134 PDS5BQ9NTI5 1447 aa28.84■■■□□ 2.21
CDK5RAP3-207ENST00000578134 FANCD2Q9BXW9 1451 aa28.74■■■□□ 2.19
CDK5RAP3-207ENST00000578134 CHIC1Q5VXU3 224 aa28.72■■■□□ 2.19
CDK5RAP3-207ENST00000578134 CEP164Q9UPV0 1460 aa28.64■■■□□ 2.17
CDK5RAP3-207ENST00000578134 WRNQ14191 1432 aaPredicted RBP eCLIP28.61■■■□□ 2.17
CDK5RAP3-207ENST00000578134 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
CDK5RAP3-207ENST00000578134 ABCC8Q09428 1581 aa28.57■■■□□ 2.16
CDK5RAP3-207ENST00000578134 KIF21AQ7Z4S6 1674 aa28.51■■■□□ 2.16
CDK5RAP3-207ENST00000578134 ERCC6Q03468 1493 aa28.51■■■□□ 2.15
CDK5RAP3-207ENST00000578134 TOP2BQ02880 1626 aa28.43■■■□□ 2.14
CDK5RAP3-207ENST00000578134 MRC2Q9UBG0 1479 aa28.42■■■□□ 2.14
CDK5RAP3-207ENST00000578134 CUX1P39880 1505 aa28.42■■■□□ 2.14
CDK5RAP3-207ENST00000578134 DNMBPQ6XZF7 1577 aa28.41■■■□□ 2.14
CDK5RAP3-207ENST00000578134 BIVM-ERCC5R4GMW8 1640 aa28.4■■■□□ 2.14
CDK5RAP3-207ENST00000578134 SYNJ1O43426 1573 aa28.4■■■□□ 2.14
CDK5RAP3-207ENST00000578134 URB2Q14146 1524 aaKnown RBP28.36■■■□□ 2.13
CDK5RAP3-207ENST00000578134 TOPBP1Q92547 1522 aa28.36■■■□□ 2.13
CDK5RAP3-207ENST00000578134 WDR62O43379 1518 aa28.28■■■□□ 2.12
CDK5RAP3-207ENST00000578134 THOC2Q8NI27 1593 aaKnown RBP28.24■■■□□ 2.11
CDK5RAP3-207ENST00000578134 FGD5Q6ZNL6 1462 aa28.21■■■□□ 2.11
CDK5RAP3-207ENST00000578134 POLA1P09884 1462 aaPredicted RBP28.17■■■□□ 2.1
CDK5RAP3-207ENST00000578134 SOGA1O94964 1423 aa28.14■■■□□ 2.1
CDK5RAP3-207ENST00000578134 EEA1Q15075 1411 aa28.06■■■□□ 2.08
CDK5RAP3-207ENST00000578134 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
CDK5RAP3-207ENST00000578134 ABCA10Q8WWZ4 1543 aa28.03■■■□□ 2.08
CDK5RAP3-207ENST00000578134 CUX2O14529 1486 aa28.02■■■□□ 2.08
CDK5RAP3-207ENST00000578134 RAD54L2Q9Y4B4 1467 aa28.02■■■□□ 2.08
CDK5RAP3-207ENST00000578134 KIF27Q86VH2 1401 aa27.99■■■□□ 2.07
CDK5RAP3-207ENST00000578134 TARBP1Q13395 1621 aaKnown RBP27.96■■■□□ 2.07
CDK5RAP3-207ENST00000578134 WDR97A6NE52 1622 aa27.89■■■□□ 2.06
CDK5RAP3-207ENST00000578134 CSRNP3Q8WYN3 585 aa27.88■■■□□ 2.05
CDK5RAP3-207ENST00000578134 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
CDK5RAP3-207ENST00000578134 FAM9AQ8IZU1 332 aaPredicted RBP27.85■■■□□ 2.05
CDK5RAP3-207ENST00000578134 TDRD9Q8NDG6 1382 aaKnown RBP27.83■■■□□ 2.05
CDK5RAP3-207ENST00000578134 GAPVD1Q14C86 1478 aa27.8■■■□□ 2.04
CDK5RAP3-207ENST00000578134 ABCA5Q8WWZ7 1642 aa27.78■■■□□ 2.04
CDK5RAP3-207ENST00000578134 IGF1RP08069 1367 aa27.77■■■□□ 2.04
CDK5RAP3-207ENST00000578134 ZNF608Q9ULD9 1512 aaPredicted RBP27.73■■■□□ 2.03
CDK5RAP3-207ENST00000578134 AQRO60306 1485 aaKnown RBP eCLIP27.73■■■□□ 2.032e-7■■■■□ 24.7
CDK5RAP3-207ENST00000578134 ERICH3Q5RHP9 1530 aa27.72■■■□□ 2.03
CDK5RAP3-207ENST00000578134 GRIN2BQ13224 1484 aa27.7■■■□□ 2.02
CDK5RAP3-207ENST00000578134 EIF4G3O43432 1585 aaKnown RBP27.65■■■□□ 2.02
CDK5RAP3-207ENST00000578134 PRXQ9BXM0 1461 aa27.63■■■□□ 2.01
CDK5RAP3-207ENST00000578134 CARMIL1Q5VZK9 1371 aa27.62■■■□□ 2.01
CDK5RAP3-207ENST00000578134 CUL7Q14999 1698 aa27.61■■■□□ 2.01
CDK5RAP3-207ENST00000578134 KIF21BO75037 1637 aa27.59■■■□□ 2.01
CDK5RAP3-207ENST00000578134 PBRM1Q86U86 1689 aa27.59■■■□□ 2.01
CDK5RAP3-207ENST00000578134 FHAD1B1AJZ9 1412 aa27.54■■■□□ 2
CDK5RAP3-207ENST00000578134 MAGI1Q96QZ7 1491 aaPredicted RBP27.54■■■□□ 2
CDK5RAP3-207ENST00000578134 RAPGEF2Q9Y4G8 1499 aa27.54■■■□□ 2
CDK5RAP3-207ENST00000578134 GOLGA3Q08378 1498 aa27.52■■■□□ 2
CDK5RAP3-207ENST00000578134 LOC105371045A0A1W2PR82 267 aa27.49■■□□□ 1.99
CDK5RAP3-207ENST00000578134 SNAPC4Q5SXM2 1469 aa27.47■■□□□ 1.99
CDK5RAP3-207ENST00000578134 ADAMTS12P58397 1594 aa27.44■■□□□ 1.98
CDK5RAP3-207ENST00000578134 UBTFP17480 764 aaKnown RBP27.43■■□□□ 1.98
CDK5RAP3-207ENST00000578134 SYNJ2O15056 1496 aa27.41■■□□□ 1.98
CDK5RAP3-207ENST00000578134 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.98
CDK5RAP3-207ENST00000578134 TNIKQ9UKE5 1360 aa27.38■■□□□ 1.97
CDK5RAP3-207ENST00000578134 EHMT2Q96KQ7 1210 aa27.35■■□□□ 1.97
CDK5RAP3-207ENST00000578134 GRIN2AQ12879 1464 aa27.31■■□□□ 1.96
CDK5RAP3-207ENST00000578134 FBLN2P98095 1184 aa27.28■■□□□ 1.96
CDK5RAP3-207ENST00000578134 NUP160Q12769 1436 aa27.16■■□□□ 1.94
CDK5RAP3-207ENST00000578134 KIAA0586Q9BVV6 1533 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms