RNA–Protein interactions for RNA: ENST00000512123.3

FRAS1-207, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FRAS1, Length 15,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-207ENST00000512123 MYT1Q01538 1121 aa9.98□□□□□ -0.81
FRAS1-207ENST00000512123 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
FRAS1-207ENST00000512123 TTBK1Q5TCY1 1321 aaPredicted RBP9.15□□□□□ -0.95
FRAS1-207ENST00000512123 CENPBP07199 599 aaPredicted RBP9.12□□□□□ -0.95
FRAS1-207ENST00000512123 ZEB1P37275 1124 aaPredicted RBP9.05□□□□□ -0.96
FRAS1-207ENST00000512123 ERICH6Q7L0X2 663 aa9.04□□□□□ -0.96
FRAS1-207ENST00000512123 CCER1Q8TC90 406 aaPredicted RBP9.03□□□□□ -0.96
FRAS1-207ENST00000512123 PCGF6Q9BYE7 350 aa8.97□□□□□ -0.97
FRAS1-207ENST00000512123 HRCP23327 699 aa8.88□□□□□ -0.99
FRAS1-207ENST00000512123 YTHDC1Q96MU7 727 aaKnown RBP8.81□□□□□ -1
FRAS1-207ENST00000512123 SUPT5HO00267 1087 aaKnown RBP8.71□□□□□ -1.01
FRAS1-207ENST00000512123 NEFLP07196 543 aa8.71□□□□□ -1.02
FRAS1-207ENST00000512123 DCAF8L2P0C7V8 631 aa8.55□□□□□ -1.04
FRAS1-207ENST00000512123 PPARGC1BQ86YN6 1023 aaKnown RBP8.53□□□□□ -1.04
FRAS1-207ENST00000512123 RTL5Q5HYW3 569 aaPredicted RBP8.52□□□□□ -1.05
FRAS1-207ENST00000512123 DAXXQ9UER7 740 aaPredicted RBP8.51□□□□□ -1.05
FRAS1-207ENST00000512123 TRIM26Q12899 539 aaPredicted RBP8.5□□□□□ -1.05
FRAS1-207ENST00000512123 GTF3C3Q9Y5Q9 886 aa8.5□□□□□ -1.05
FRAS1-207ENST00000512123 ACIN1Q9UKV3 1341 aaKnown RBP8.47□□□□□ -1.05
FRAS1-207ENST00000512123 MYT1LQ9UL68 1186 aa8.46□□□□□ -1.05
FRAS1-207ENST00000512123 GLIPR1L2Q4G1C9 344 aa8.43□□□□□ -1.06
FRAS1-207ENST00000512123 APLP2Q06481 763 aa8.43□□□□□ -1.06
FRAS1-207ENST00000512123 DIEXFQ68CQ4 756 aaKnown RBP8.39□□□□□ -1.07
FRAS1-207ENST00000512123 EHMT2Q96KQ7 1210 aa8.38□□□□□ -1.07
FRAS1-207ENST00000512123 EIF5BO60841 1220 aaKnown RBP8.36□□□□□ -1.07
FRAS1-207ENST00000512123 BCL11AQ9H165 835 aa8.34□□□□□ -1.07
FRAS1-207ENST00000512123 CDK11AQ9UQ88 783 aaPredicted RBP8.34□□□□□ -1.07
FRAS1-207ENST00000512123 RANGAP1P46060 587 aaPredicted RBP8.33□□□□□ -1.08
FRAS1-207ENST00000512123 SCAF1Q9H7N4 1312 aaKnown RBP8.32□□□□□ -1.08
FRAS1-207ENST00000512123 ZNF316A6NFI3 1004 aaPredicted RBP8.28□□□□□ -1.08
FRAS1-207ENST00000512123 ANP32EQ9BTT0 268 aa8.28□□□□□ -1.08
FRAS1-207ENST00000512123 CLSPNQ9HAW4 1339 aa8.24□□□□□ -1.09
FRAS1-207ENST00000512123 FAM9AQ8IZU1 332 aaPredicted RBP8.22□□□□□ -1.09
FRAS1-207ENST00000512123 BCANQ96GW7 911 aa8.19□□□□□ -1.1
FRAS1-207ENST00000512123 NEUROD1Q13562 356 aa8.16□□□□□ -1.1
FRAS1-207ENST00000512123 SHROOM4Q9ULL8 1493 aa8.15□□□□□ -1.1
FRAS1-207ENST00000512123 ANP32AP39687 249 aaKnown RBP8.12□□□□□ -1.11
FRAS1-207ENST00000512123 LOC105371045A0A1W2PR82 267 aa8.1□□□□□ -1.11
FRAS1-207ENST00000512123 SLC24A1O60721 1099 aa8.1□□□□□ -1.11
FRAS1-207ENST00000512123 TNNT2P45379 298 aaPredicted RBP8.09□□□□□ -1.11
FRAS1-207ENST00000512123 TRIM41Q8WV44 630 aa8.09□□□□□ -1.11
FRAS1-207ENST00000512123 NBR1Q14596 966 aa8.05□□□□□ -1.12
FRAS1-207ENST00000512123 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.04□□□□□ -1.12
FRAS1-207ENST00000512123 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
FRAS1-207ENST00000512123 ANP32BQ92688 251 aaKnown RBP8.01□□□□□ -1.13
FRAS1-207ENST00000512123 NCLP19338 710 aaKnown RBP8.01□□□□□ -1.13
FRAS1-207ENST00000512123 CHIC1Q5VXU3 224 aa8□□□□□ -1.13
FRAS1-207ENST00000512123 ERICH6BQ5W0A0 696 aa7.99□□□□□ -1.13
FRAS1-207ENST00000512123 ANP32CO43423 234 aa7.98□□□□□ -1.13
FRAS1-207ENST00000512123 UBTFP17480 764 aaKnown RBP7.98□□□□□ -1.13
FRAS1-207ENST00000512123 FKBP8Q14318 412 aa7.98□□□□□ -1.13
FRAS1-207ENST00000512123 DEKP35659 375 aaKnown RBP7.98□□□□□ -1.13
FRAS1-207ENST00000512123 NISCHQ9Y2I1 1504 aa7.98□□□□□ -1.13
FRAS1-207ENST00000512123 PRKCSHP14314 528 aaPredicted RBP7.93□□□□□ -1.14
FRAS1-207ENST00000512123 CSRNP3Q8WYN3 585 aa7.93□□□□□ -1.14
FRAS1-207ENST00000512123 HNRNPUL2Q1KMD3 747 aaKnown RBP7.91□□□□□ -1.14
FRAS1-207ENST00000512123 NPM2Q86SE8 214 aaKnown RBP7.9□□□□□ -1.14
FRAS1-207ENST00000512123 NEFMP07197 916 aa7.87□□□□□ -1.15
FRAS1-207ENST00000512123 MIER1Q8N108 512 aa7.87□□□□□ -1.15
FRAS1-207ENST00000512123 NAP1L5Q96NT1 182 aaPredicted RBP7.87□□□□□ -1.15
FRAS1-207ENST00000512123 HSP90AA1P07900 732 aaKnown RBP7.86□□□□□ -1.15
FRAS1-207ENST00000512123 DDRGK1Q96HY6 314 aa7.86□□□□□ -1.15
FRAS1-207ENST00000512123 RTN4Q9NQC3 1192 aaKnown RBP7.85□□□□□ -1.15
FRAS1-207ENST00000512123 TRIM44Q96DX7 344 aaPredicted RBP7.85□□□□□ -1.15
FRAS1-207ENST00000512123 RSPH6AQ9H0K4 717 aa7.84□□□□□ -1.15
FRAS1-207ENST00000512123 PPM1GO15355 546 aaPredicted RBP7.84□□□□□ -1.15
FRAS1-207ENST00000512123 ITGAEP38570 1179 aa7.84□□□□□ -1.15
FRAS1-207ENST00000512123 NOP58Q9Y2X3 529 aaKnown RBP7.83□□□□□ -1.16
FRAS1-207ENST00000512123 POLR3GLQ9BT43 218 aa7.82□□□□□ -1.16
FRAS1-207ENST00000512123 RBM19Q9Y4C8 960 aaKnown RBP7.8□□□□□ -1.16
FRAS1-207ENST00000512123 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.79□□□□□ -1.16
FRAS1-207ENST00000512123 CDK11BP21127 795 aaKnown RBP7.78□□□□□ -1.16
FRAS1-207ENST00000512123 ATP1B4Q9UN42 357 aaPredicted RBP7.78□□□□□ -1.16
FRAS1-207ENST00000512123 SUPT16HQ9Y5B9 1047 aaKnown RBP7.77□□□□□ -1.17
FRAS1-207ENST00000512123 PODXL2Q9NZ53 605 aa7.77□□□□□ -1.17
FRAS1-207ENST00000512123 TSHZ2Q9NRE2 1034 aa7.76□□□□□ -1.17
FRAS1-207ENST00000512123 CCDC136Q96JN2 1154 aa7.76□□□□□ -1.17
FRAS1-207ENST00000512123 PTMSP20962 102 aa7.76□□□□□ -1.17
FRAS1-207ENST00000512123 L1TD1Q5T7N2 865 aaKnown RBP7.75□□□□□ -1.17
FRAS1-207ENST00000512123 VSIG10Q8N0Z9 540 aa7.75□□□□□ -1.17
FRAS1-207ENST00000512123 ZNF326Q5BKZ1 582 aaKnown RBP7.74□□□□□ -1.17
FRAS1-207ENST00000512123 BECN1Q14457 450 aa7.74□□□□□ -1.17
FRAS1-207ENST00000512123 PKNOX2Q96KN3 472 aa7.74□□□□□ -1.17
FRAS1-207ENST00000512123 HSP90AA2PQ14568 343 aaPredicted RBP7.73□□□□□ -1.17
FRAS1-207ENST00000512123 CNGB1Q14028 1251 aaPredicted RBP7.73□□□□□ -1.17
FRAS1-207ENST00000512123 UPF2Q9HAU5 1272 aaKnown RBP7.73□□□□□ -1.17
FRAS1-207ENST00000512123 AMER1Q5JTC6 1135 aaPredicted RBP7.72□□□□□ -1.17
FRAS1-207ENST00000512123 PPP4R2Q9NY27 417 aa7.72□□□□□ -1.17
FRAS1-207ENST00000512123 LAS1LQ9Y4W2 734 aaKnown RBP7.7□□□□□ -1.18
FRAS1-207ENST00000512123 ANO8Q9HCE9 1232 aaPredicted RBP7.68□□□□□ -1.18
FRAS1-207ENST00000512123 ARXQ96QS3 562 aa7.67□□□□□ -1.18
FRAS1-207ENST00000512123 PNNQ9H307 717 aaKnown RBP7.67□□□□□ -1.18
FRAS1-207ENST00000512123 HNRNPUQ00839 825 aaKnown RBP eCLIP7.66□□□□□ -1.18
FRAS1-207ENST00000512123 DDX10Q13206 875 aaKnown RBP7.65□□□□□ -1.18
FRAS1-207ENST00000512123 PTMAP06454 111 aaKnown RBP7.64□□□□□ -1.19
FRAS1-207ENST00000512123 TNNT3P45378 269 aaPredicted RBP7.64□□□□□ -1.19
FRAS1-207ENST00000512123 CANXP27824 592 aaKnown RBP7.63□□□□□ -1.19
FRAS1-207ENST00000512123 IRX6P78412 446 aaPredicted RBP7.63□□□□□ -1.19
FRAS1-207ENST00000512123 GOLGA6L22H0YM25 854 aa7.62□□□□□ -1.19
FRAS1-207ENST00000512123 USP35Q9P2H5 1018 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms