RNA–Protein interactions for RNA: ENST00000629659.2

EWSR1-222, Transcript of EWS RNA binding protein 1, humanhuman

TSL 5 BASIC

Gene EWSR1, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-222ENST00000629659 NISCHQ9Y2I1 1504 aa34.52■■■■□ 3.12
EWSR1-222ENST00000629659 SHROOM4Q9ULL8 1493 aa29.45■■■□□ 2.31
EWSR1-222ENST00000629659 CCDC180Q9P1Z9 1646 aa29.39■■■□□ 2.3
EWSR1-222ENST00000629659 ZCCHC6Q5VYS8 1495 aaKnown RBP29.19■■■□□ 2.26
EWSR1-222ENST00000629659 SUPT5HO00267 1087 aaKnown RBP29.1■■■□□ 2.25
EWSR1-222ENST00000629659 HRCP23327 699 aa28.74■■■□□ 2.19
EWSR1-222ENST00000629659 MYO15BQ96JP2 1530 aa28.65■■■□□ 2.18
EWSR1-222ENST00000629659 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
EWSR1-222ENST00000629659 CHIC1Q5VXU3 224 aa28.61■■■□□ 2.17
EWSR1-222ENST00000629659 PCGF6Q9BYE7 350 aa28.31■■■□□ 2.12
EWSR1-222ENST00000629659 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
EWSR1-222ENST00000629659 PPARGC1BQ86YN6 1023 aaKnown RBP28.05■■■□□ 2.08
EWSR1-222ENST00000629659 LOC105371045A0A1W2PR82 267 aa27.8■■■□□ 2.04
EWSR1-222ENST00000629659 TRIM26Q12899 539 aaPredicted RBP27.62■■■□□ 2.01
EWSR1-222ENST00000629659 SCRIBQ14160 1630 aa27.6■■■□□ 2.01
EWSR1-222ENST00000629659 ABCC9O60706 1549 aa27.56■■■□□ 2
EWSR1-222ENST00000629659 RSF1Q96T23 1441 aaPredicted RBP27.29■■□□□ 1.96
EWSR1-222ENST00000629659 ZEB1P37275 1124 aaPredicted RBP27.27■■□□□ 1.96
EWSR1-222ENST00000629659 NACADO15069 1562 aa27.15■■□□□ 1.94
EWSR1-222ENST00000629659 RB1CC1Q8TDY2 1594 aa27.07■■□□□ 1.92
EWSR1-222ENST00000629659 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
EWSR1-222ENST00000629659 PELP1Q8IZL8 1130 aaKnown RBP26.98■■□□□ 1.91
EWSR1-222ENST00000629659 CECR2Q9BXF3 1484 aa26.97■■□□□ 1.91
EWSR1-222ENST00000629659 MROH2BQ7Z745 1585 aa26.87■■□□□ 1.89
EWSR1-222ENST00000629659 FAM9AQ8IZU1 332 aaPredicted RBP26.87■■□□□ 1.89
EWSR1-222ENST00000629659 SCAF1Q9H7N4 1312 aaKnown RBP26.86■■□□□ 1.89
EWSR1-222ENST00000629659 WIZO95785 1651 aa26.76■■□□□ 1.87
EWSR1-222ENST00000629659 EHMT2Q96KQ7 1210 aa26.61■■□□□ 1.85
EWSR1-222ENST00000629659 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
EWSR1-222ENST00000629659 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
EWSR1-222ENST00000629659 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.4■■□□□ 1.82
EWSR1-222ENST00000629659 ACIN1Q9UKV3 1341 aaKnown RBP26.39■■□□□ 1.82
EWSR1-222ENST00000629659 EIF4G1Q04637 1599 aaKnown RBP26.36■■□□□ 1.81
EWSR1-222ENST00000629659 CCER1Q8TC90 406 aaPredicted RBP26.36■■□□□ 1.81
EWSR1-222ENST00000629659 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
EWSR1-222ENST00000629659 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
EWSR1-222ENST00000629659 TOP2AP11388 1531 aaKnown RBP26.28■■□□□ 1.8
EWSR1-222ENST00000629659 DIEXFQ68CQ4 756 aaKnown RBP26.18■■□□□ 1.78
EWSR1-222ENST00000629659 CCDC88BA6NC98 1476 aa26.17■■□□□ 1.78
EWSR1-222ENST00000629659 SMARCA2P51531 1590 aa26.16■■□□□ 1.78
EWSR1-222ENST00000629659 ABCC8Q09428 1581 aa26.14■■□□□ 1.78
EWSR1-222ENST00000629659 WRNQ14191 1432 aaPredicted RBP eCLIP26.13■■□□□ 1.77
EWSR1-222ENST00000629659 CENPBP07199 599 aaPredicted RBP26.1■■□□□ 1.77
EWSR1-222ENST00000629659 PABPN1Q86U42 306 aaKnown RBP eCLIP26.09■■□□□ 1.778e-9■□□□□ 10.7
EWSR1-222ENST00000629659 GTF3C3Q9Y5Q9 886 aa26.09■■□□□ 1.77
EWSR1-222ENST00000629659 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
EWSR1-222ENST00000629659 CEP162Q5TB80 1403 aa25.98■■□□□ 1.75
EWSR1-222ENST00000629659 TTBK1Q5TCY1 1321 aaPredicted RBP25.92■■□□□ 1.74
EWSR1-222ENST00000629659 TNIKQ9UKE5 1360 aa25.9■■□□□ 1.74
EWSR1-222ENST00000629659 SOGA1O94964 1423 aa25.85■■□□□ 1.73
EWSR1-222ENST00000629659 ZNF316A6NFI3 1004 aaPredicted RBP25.84■■□□□ 1.73
EWSR1-222ENST00000629659 PEG3Q9GZU2 1588 aa25.79■■□□□ 1.72
EWSR1-222ENST00000629659 MYT1Q01538 1121 aa25.78■■□□□ 1.72
EWSR1-222ENST00000629659 EEA1Q15075 1411 aa25.76■■□□□ 1.71
EWSR1-222ENST00000629659 RUSC2Q8N2Y8 1516 aa25.75■■□□□ 1.71
EWSR1-222ENST00000629659 CSRNP3Q8WYN3 585 aa25.74■■□□□ 1.71
EWSR1-222ENST00000629659 UBTFP17480 764 aaKnown RBP25.67■■□□□ 1.7
EWSR1-222ENST00000629659 ATAD2BQ9ULI0 1458 aa25.64■■□□□ 1.69
EWSR1-222ENST00000629659 GOLGA3Q08378 1498 aa25.62■■□□□ 1.69
EWSR1-222ENST00000629659 YTHDC1Q96MU7 727 aaKnown RBP25.58■■□□□ 1.69
EWSR1-222ENST00000629659 SYNJ1O43426 1573 aa25.58■■□□□ 1.68
EWSR1-222ENST00000629659 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
EWSR1-222ENST00000629659 MIER1Q8N108 512 aa25.56■■□□□ 1.68
EWSR1-222ENST00000629659 HNRNPUL2Q1KMD3 747 aaKnown RBP25.47■■□□□ 1.67
EWSR1-222ENST00000629659 CEP164Q9UPV0 1460 aa25.41■■□□□ 1.66
EWSR1-222ENST00000629659 KIF21BO75037 1637 aa25.37■■□□□ 1.65
EWSR1-222ENST00000629659 CLIP1P30622 1438 aa25.37■■□□□ 1.65
EWSR1-222ENST00000629659 VPS8Q8N3P4 1428 aa25.34■■□□□ 1.65
EWSR1-222ENST00000629659 TOP2BQ02880 1626 aa25.23■■□□□ 1.63
EWSR1-222ENST00000629659 RAPGEF2Q9Y4G8 1499 aa25.21■■□□□ 1.63
EWSR1-222ENST00000629659 APLP2Q06481 763 aa25.21■■□□□ 1.63
EWSR1-222ENST00000629659 BIVM-ERCC5R4GMW8 1640 aa25.16■■□□□ 1.62
EWSR1-222ENST00000629659 CLSPNQ9HAW4 1339 aa25.15■■□□□ 1.62
EWSR1-222ENST00000629659 HMGXB3Q12766 1538 aa25.13■■□□□ 1.61
EWSR1-222ENST00000629659 RANGAP1P46060 587 aaPredicted RBP25.12■■□□□ 1.61
EWSR1-222ENST00000629659 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
EWSR1-222ENST00000629659 DHX57Q6P158 1386 aaKnown RBP25.08■■□□□ 1.61
EWSR1-222ENST00000629659 CUX1P39880 1505 aa25.02■■□□□ 1.6
EWSR1-222ENST00000629659 SUPT16HQ9Y5B9 1047 aaKnown RBP25.01■■□□□ 1.59
EWSR1-222ENST00000629659 PRXQ9BXM0 1461 aa24.94■■□□□ 1.58
EWSR1-222ENST00000629659 ERICH3Q5RHP9 1530 aa24.92■■□□□ 1.58
EWSR1-222ENST00000629659 CFTRP13569 1480 aa24.92■■□□□ 1.58
EWSR1-222ENST00000629659 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
EWSR1-222ENST00000629659 KANK4Q5T7N3 995 aaPredicted RBP24.88■■□□□ 1.57
EWSR1-222ENST00000629659 RRBP1Q9P2E9 1410 aaKnown RBP24.85■■□□□ 1.57
EWSR1-222ENST00000629659 KIF27Q86VH2 1401 aa24.82■■□□□ 1.56
EWSR1-222ENST00000629659 CUX2O14529 1486 aa24.81■■□□□ 1.56
EWSR1-222ENST00000629659 PRDM2Q13029 1718 aa24.79■■□□□ 1.56
EWSR1-222ENST00000629659 TSHZ2Q9NRE2 1034 aa24.76■■□□□ 1.55
EWSR1-222ENST00000629659 CCNB3Q8WWL7 1395 aa24.7■■□□□ 1.55
EWSR1-222ENST00000629659 CADPSQ9ULU8 1353 aa24.64■■□□□ 1.54
EWSR1-222ENST00000629659 KCNH8Q96L42 1107 aa24.63■■□□□ 1.53
EWSR1-222ENST00000629659 ARHGAP35Q9NRY4 1499 aa24.62■■□□□ 1.53
EWSR1-222ENST00000629659 CC2D2AQ9P2K1 1620 aa24.59■■□□□ 1.53
EWSR1-222ENST00000629659 FGD5Q6ZNL6 1462 aa24.57■■□□□ 1.52
EWSR1-222ENST00000629659 MAPKBP1O60336 1514 aa24.57■■□□□ 1.52
EWSR1-222ENST00000629659 IGF1RP08069 1367 aa24.57■■□□□ 1.52
EWSR1-222ENST00000629659 ANP32EQ9BTT0 268 aa24.57■■□□□ 1.52
EWSR1-222ENST00000629659 RAB3GAP2Q9H2M9 1393 aa24.57■■□□□ 1.52
EWSR1-222ENST00000629659 ITGAEP38570 1179 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms