RNA–Protein interactions for RNA: ENST00000617231.4

RAVER1-208, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RAVER1, Length 3,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-208ENST00000617231 NISCHQ9Y2I1 1504 aa22.39■■□□□ 1.18
RAVER1-208ENST00000617231 DCAF8L2P0C7V8 631 aa19.96■□□□□ 0.79
RAVER1-208ENST00000617231 ABCC9O60706 1549 aa19.88■□□□□ 0.77
RAVER1-208ENST00000617231 SHROOM4Q9ULL8 1493 aa19.58■□□□□ 0.72
RAVER1-208ENST00000617231 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
RAVER1-208ENST00000617231 CCDC180Q9P1Z9 1646 aa19.38■□□□□ 0.69
RAVER1-208ENST00000617231 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
RAVER1-208ENST00000617231 EHMT2Q96KQ7 1210 aa18.63■□□□□ 0.57
RAVER1-208ENST00000617231 PCGF6Q9BYE7 350 aa18.6■□□□□ 0.57
RAVER1-208ENST00000617231 ZCCHC6Q5VYS8 1495 aaKnown RBP18.57■□□□□ 0.56
RAVER1-208ENST00000617231 RB1CC1Q8TDY2 1594 aa18.55■□□□□ 0.56
RAVER1-208ENST00000617231 PPARGC1BQ86YN6 1023 aaKnown RBP18.44■□□□□ 0.54
RAVER1-208ENST00000617231 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
RAVER1-208ENST00000617231 NACADO15069 1562 aa18.43■□□□□ 0.54
RAVER1-208ENST00000617231 HRCP23327 699 aa18.35■□□□□ 0.53
RAVER1-208ENST00000617231 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
RAVER1-208ENST00000617231 CHIC1Q5VXU3 224 aa18.31■□□□□ 0.52
RAVER1-208ENST00000617231 LOC105371045A0A1W2PR82 267 aa18.28■□□□□ 0.52
RAVER1-208ENST00000617231 FAM9AQ8IZU1 332 aaPredicted RBP18.21■□□□□ 0.51
RAVER1-208ENST00000617231 MYO15BQ96JP2 1530 aa18.16■□□□□ 0.5
RAVER1-208ENST00000617231 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
RAVER1-208ENST00000617231 UNC13AQ9UPW8 1703 aa18.04■□□□□ 0.48
RAVER1-208ENST00000617231 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
RAVER1-208ENST00000617231 TTBK1Q5TCY1 1321 aaPredicted RBP17.9■□□□□ 0.46
RAVER1-208ENST00000617231 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
RAVER1-208ENST00000617231 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
RAVER1-208ENST00000617231 TRIM26Q12899 539 aaPredicted RBP17.65■□□□□ 0.42
RAVER1-208ENST00000617231 EIF4G1Q04637 1599 aaKnown RBP17.62■□□□□ 0.41
RAVER1-208ENST00000617231 CC2D2AQ9P2K1 1620 aa17.59■□□□□ 0.41
RAVER1-208ENST00000617231 RANGAP1P46060 587 aaPredicted RBP17.5■□□□□ 0.39
RAVER1-208ENST00000617231 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.39
RAVER1-208ENST00000617231 PELP1Q8IZL8 1130 aaKnown RBP17.43■□□□□ 0.38
RAVER1-208ENST00000617231 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.4■□□□□ 0.38
RAVER1-208ENST00000617231 CCER1Q8TC90 406 aaPredicted RBP17.39■□□□□ 0.38
RAVER1-208ENST00000617231 SCAF1Q9H7N4 1312 aaKnown RBP17.33■□□□□ 0.37
RAVER1-208ENST00000617231 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
RAVER1-208ENST00000617231 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
RAVER1-208ENST00000617231 RSF1Q96T23 1441 aaPredicted RBP17.3■□□□□ 0.36
RAVER1-208ENST00000617231 BAZ1AQ9NRL2 1556 aaPredicted RBP17.29■□□□□ 0.36
RAVER1-208ENST00000617231 BAZ1BQ9UIG0 1483 aaKnown RBP17.28■□□□□ 0.36
RAVER1-208ENST00000617231 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.36
RAVER1-208ENST00000617231 WIZO95785 1651 aa17.27■□□□□ 0.35
RAVER1-208ENST00000617231 YTHDC1Q96MU7 727 aaKnown RBP17.2■□□□□ 0.34
RAVER1-208ENST00000617231 NESP48681 1621 aa17.18■□□□□ 0.34
RAVER1-208ENST00000617231 UBTFP17480 764 aaKnown RBP17.14■□□□□ 0.33
RAVER1-208ENST00000617231 NCAPD3P42695 1498 aa17.14■□□□□ 0.33
RAVER1-208ENST00000617231 SMARCA2P51531 1590 aa17.12■□□□□ 0.33
RAVER1-208ENST00000617231 ERCC6Q03468 1493 aa17.08■□□□□ 0.32
RAVER1-208ENST00000617231 MYT1Q01538 1121 aa17.07■□□□□ 0.32
RAVER1-208ENST00000617231 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
RAVER1-208ENST00000617231 HNRNPUL2Q1KMD3 747 aaKnown RBP17■□□□□ 0.31
RAVER1-208ENST00000617231 GTF3C3Q9Y5Q9 886 aa17■□□□□ 0.31
RAVER1-208ENST00000617231 DIEXFQ68CQ4 756 aaKnown RBP16.96■□□□□ 0.31
RAVER1-208ENST00000617231 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
RAVER1-208ENST00000617231 CCDC88BA6NC98 1476 aa16.91■□□□□ 0.3
RAVER1-208ENST00000617231 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
RAVER1-208ENST00000617231 CENPBP07199 599 aaPredicted RBP16.88■□□□□ 0.29
RAVER1-208ENST00000617231 CADPSQ9ULU8 1353 aa16.88■□□□□ 0.29
RAVER1-208ENST00000617231 APLP2Q06481 763 aa16.84■□□□□ 0.29
RAVER1-208ENST00000617231 TOP2AP11388 1531 aaKnown RBP16.83■□□□□ 0.28
RAVER1-208ENST00000617231 PEG3Q9GZU2 1588 aa16.8■□□□□ 0.28
RAVER1-208ENST00000617231 PRKCSHP14314 528 aaPredicted RBP16.79■□□□□ 0.28
RAVER1-208ENST00000617231 PDS5BQ9NTI5 1447 aa16.75■□□□□ 0.27
RAVER1-208ENST00000617231 FBLN2P98095 1184 aa16.72■□□□□ 0.27
RAVER1-208ENST00000617231 ITGAEP38570 1179 aa16.72■□□□□ 0.27
RAVER1-208ENST00000617231 FANCD2Q9BXW9 1451 aa16.72■□□□□ 0.27
RAVER1-208ENST00000617231 ATP1B4Q9UN42 357 aaPredicted RBP16.67■□□□□ 0.26
RAVER1-208ENST00000617231 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
RAVER1-208ENST00000617231 CFTRP13569 1480 aa16.63■□□□□ 0.25
RAVER1-208ENST00000617231 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
RAVER1-208ENST00000617231 KIF21AQ7Z4S6 1674 aa16.6■□□□□ 0.25
RAVER1-208ENST00000617231 MIER1Q8N108 512 aa16.58■□□□□ 0.25
RAVER1-208ENST00000617231 ZNF316A6NFI3 1004 aaPredicted RBP16.58■□□□□ 0.24
RAVER1-208ENST00000617231 LAMC3Q9Y6N6 1575 aa16.58■□□□□ 0.24
RAVER1-208ENST00000617231 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
RAVER1-208ENST00000617231 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
RAVER1-208ENST00000617231 SOGA1O94964 1423 aa16.5■□□□□ 0.23
RAVER1-208ENST00000617231 MRC2Q9UBG0 1479 aa16.49■□□□□ 0.23
RAVER1-208ENST00000617231 URB2Q14146 1524 aaKnown RBP16.48■□□□□ 0.23
RAVER1-208ENST00000617231 RAD54L2Q9Y4B4 1467 aa16.47■□□□□ 0.23
RAVER1-208ENST00000617231 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
RAVER1-208ENST00000617231 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.224e-7■■■■■ 32.6
RAVER1-208ENST00000617231 ZNF608Q9ULD9 1512 aaPredicted RBP16.4■□□□□ 0.22
RAVER1-208ENST00000617231 TOPBP1Q92547 1522 aa16.38■□□□□ 0.21
RAVER1-208ENST00000617231 WRNQ14191 1432 aaPredicted RBP eCLIP16.37■□□□□ 0.21
RAVER1-208ENST00000617231 BCANQ96GW7 911 aa16.37■□□□□ 0.21
RAVER1-208ENST00000617231 RUSC2Q8N2Y8 1516 aa16.37■□□□□ 0.21
RAVER1-208ENST00000617231 THOC2Q8NI27 1593 aaKnown RBP16.35■□□□□ 0.21
RAVER1-208ENST00000617231 P3H3Q8IVL6 736 aa16.35■□□□□ 0.21
RAVER1-208ENST00000617231 CHMP7Q8WUX9 453 aaPredicted RBP16.33■□□□□ 0.21
RAVER1-208ENST00000617231 FGD5Q6ZNL6 1462 aa16.33■□□□□ 0.2
RAVER1-208ENST00000617231 CUX1P39880 1505 aa16.31■□□□□ 0.2
RAVER1-208ENST00000617231 CUX2O14529 1486 aa16.3■□□□□ 0.2
RAVER1-208ENST00000617231 POLA1P09884 1462 aaPredicted RBP16.3■□□□□ 0.2
RAVER1-208ENST00000617231 WDR62O43379 1518 aa16.25■□□□□ 0.19
RAVER1-208ENST00000617231 ARID3CA6NKF2 412 aa16.25■□□□□ 0.19
RAVER1-208ENST00000617231 HIRIP3Q9BW71 556 aaPredicted RBP16.24■□□□□ 0.19
RAVER1-208ENST00000617231 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
RAVER1-208ENST00000617231 BCL11AQ9H165 835 aa16.23■□□□□ 0.19
RAVER1-208ENST00000617231 TNIKQ9UKE5 1360 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms