RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 DCAF8L2P0C7V8 631 aa26.11■■□□□ 1.77
RAVER1-204ENST00000592208 NISCHQ9Y2I1 1504 aa25.9■■□□□ 1.74
RAVER1-204ENST00000592208 SUPT5HO00267 1087 aaKnown RBP24.43■■□□□ 1.5
RAVER1-204ENST00000592208 SHROOM4Q9ULL8 1493 aa24.27■■□□□ 1.48
RAVER1-204ENST00000592208 EHMT2Q96KQ7 1210 aa23.45■■□□□ 1.34
RAVER1-204ENST00000592208 APLP2Q06481 763 aa23.07■■□□□ 1.28
RAVER1-204ENST00000592208 FAM9AQ8IZU1 332 aaPredicted RBP23.02■■□□□ 1.28
RAVER1-204ENST00000592208 PELP1Q8IZL8 1130 aaKnown RBP22.86■■□□□ 1.25
RAVER1-204ENST00000592208 TRIM41Q8WV44 630 aa22.66■■□□□ 1.22
RAVER1-204ENST00000592208 RANGAP1P46060 587 aaPredicted RBP22.6■■□□□ 1.21
RAVER1-204ENST00000592208 TTBK1Q5TCY1 1321 aaPredicted RBP22.55■■□□□ 1.2
RAVER1-204ENST00000592208 ABCC9O60706 1549 aa22.38■■□□□ 1.17
RAVER1-204ENST00000592208 ATP1B4Q9UN42 357 aaPredicted RBP22.36■■□□□ 1.17
RAVER1-204ENST00000592208 UBTFP17480 764 aaKnown RBP22.35■■□□□ 1.17
RAVER1-204ENST00000592208 ZEB1P37275 1124 aaPredicted RBP22.32■■□□□ 1.16
RAVER1-204ENST00000592208 PCGF6Q9BYE7 350 aa22.18■■□□□ 1.14
RAVER1-204ENST00000592208 PABPN1Q86U42 306 aaKnown RBP eCLIP22.14■■□□□ 1.14
RAVER1-204ENST00000592208 CENPBP07199 599 aaPredicted RBP21.99■■□□□ 1.11
RAVER1-204ENST00000592208 CCER1Q8TC90 406 aaPredicted RBP21.96■■□□□ 1.11
RAVER1-204ENST00000592208 CCDC180Q9P1Z9 1646 aa21.9■■□□□ 1.1
RAVER1-204ENST00000592208 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
RAVER1-204ENST00000592208 CHIC1Q5VXU3 224 aa21.74■■□□□ 1.07
RAVER1-204ENST00000592208 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.73■■□□□ 1.07
RAVER1-204ENST00000592208 HNRNPUL2Q1KMD3 747 aaKnown RBP21.73■■□□□ 1.07
RAVER1-204ENST00000592208 LOC105371045A0A1W2PR82 267 aa21.63■■□□□ 1.05
RAVER1-204ENST00000592208 NEFLP07196 543 aa21.56■■□□□ 1.04
RAVER1-204ENST00000592208 TRIM26Q12899 539 aaPredicted RBP21.55■■□□□ 1.04
RAVER1-204ENST00000592208 ERICH6Q7L0X2 663 aa21.55■■□□□ 1.04
RAVER1-204ENST00000592208 MYT1LQ9UL68 1186 aa21.55■■□□□ 1.04
RAVER1-204ENST00000592208 ITGAEP38570 1179 aa21.52■■□□□ 1.04
RAVER1-204ENST00000592208 ZCCHC6Q5VYS8 1495 aaKnown RBP21.45■■□□□ 1.02
RAVER1-204ENST00000592208 RB1CC1Q8TDY2 1594 aa21.32■■□□□ 1
RAVER1-204ENST00000592208 SCRIBQ14160 1630 aa21.26■□□□□ 0.99
RAVER1-204ENST00000592208 FBLN2P98095 1184 aa21.26■□□□□ 0.99
RAVER1-204ENST00000592208 NACADO15069 1562 aa21.2■□□□□ 0.98
RAVER1-204ENST00000592208 MYT1Q01538 1121 aa21.07■□□□□ 0.96
RAVER1-204ENST00000592208 HRCP23327 699 aa21.06■□□□□ 0.96
RAVER1-204ENST00000592208 FAM50AQ14320 339 aaKnown RBP21.05■□□□□ 0.96
RAVER1-204ENST00000592208 YTHDC1Q96MU7 727 aaKnown RBP21.05■□□□□ 0.96
RAVER1-204ENST00000592208 POLR3GLQ9BT43 218 aa21.05■□□□□ 0.96
RAVER1-204ENST00000592208 CSRNP3Q8WYN3 585 aa20.95■□□□□ 0.94
RAVER1-204ENST00000592208 P3H3Q8IVL6 736 aa20.92■□□□□ 0.94
RAVER1-204ENST00000592208 DCAF1Q9Y4B6 1507 aa20.91■□□□□ 0.94
RAVER1-204ENST00000592208 DAXXQ9UER7 740 aaPredicted RBP20.88■□□□□ 0.93
RAVER1-204ENST00000592208 TRIM52Q96A61 297 aa20.86■□□□□ 0.93
RAVER1-204ENST00000592208 ARID3CA6NKF2 412 aa20.86■□□□□ 0.93
RAVER1-204ENST00000592208 CNGB1Q14028 1251 aaPredicted RBP20.83■□□□□ 0.93
RAVER1-204ENST00000592208 SLC4A1APQ9BWU0 796 aaKnown RBP20.72■□□□□ 0.91
RAVER1-204ENST00000592208 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
RAVER1-204ENST00000592208 CDK11AQ9UQ88 783 aaPredicted RBP20.61■□□□□ 0.89
RAVER1-204ENST00000592208 ZNF777Q9ULD5 760 aaPredicted RBP20.61■□□□□ 0.89
RAVER1-204ENST00000592208 DIEXFQ68CQ4 756 aaKnown RBP20.6■□□□□ 0.89
RAVER1-204ENST00000592208 MYO15BQ96JP2 1530 aa20.59■□□□□ 0.89
RAVER1-204ENST00000592208 ZNF326Q5BKZ1 582 aaKnown RBP20.57■□□□□ 0.88
RAVER1-204ENST00000592208 NPM1P06748 294 aaKnown RBP eCLIP20.5■□□□□ 0.87
RAVER1-204ENST00000592208 RSF1Q96T23 1441 aaPredicted RBP20.49■□□□□ 0.87
RAVER1-204ENST00000592208 CHMP7Q8WUX9 453 aaPredicted RBP20.46■□□□□ 0.87
RAVER1-204ENST00000592208 BAZ1BQ9UIG0 1483 aaKnown RBP20.44■□□□□ 0.86
RAVER1-204ENST00000592208 ANP32CO43423 234 aa20.44■□□□□ 0.86
RAVER1-204ENST00000592208 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
RAVER1-204ENST00000592208 CLSPNQ9HAW4 1339 aa20.41■□□□□ 0.86
RAVER1-204ENST00000592208 BCANQ96GW7 911 aa20.35■□□□□ 0.85
RAVER1-204ENST00000592208 ZNF316A6NFI3 1004 aaPredicted RBP20.32■□□□□ 0.84
RAVER1-204ENST00000592208 ESF1Q9H501 851 aaKnown RBP20.32■□□□□ 0.84
RAVER1-204ENST00000592208 NEFMP07197 916 aa20.29■□□□□ 0.84
RAVER1-204ENST00000592208 RTL5Q5HYW3 569 aaPredicted RBP20.28■□□□□ 0.84
RAVER1-204ENST00000592208 ZBTB47Q9UFB7 747 aaPredicted RBP20.27■□□□□ 0.84
RAVER1-204ENST00000592208 CECR2Q9BXF3 1484 aa20.23■□□□□ 0.83
RAVER1-204ENST00000592208 WRNQ14191 1432 aaPredicted RBP eCLIP20.21■□□□□ 0.83
RAVER1-204ENST00000592208 CHIC2Q9UKJ5 165 aa20.19■□□□□ 0.82
RAVER1-204ENST00000592208 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
RAVER1-204ENST00000592208 CHGAP10645 457 aaKnown RBP20.18■□□□□ 0.82
RAVER1-204ENST00000592208 MTUS2Q5JR59 1369 aa20.17■□□□□ 0.82
RAVER1-204ENST00000592208 SMARCA2P51531 1590 aa20.15■□□□□ 0.82
RAVER1-204ENST00000592208 ERCC6Q03468 1493 aa20.14■□□□□ 0.82
RAVER1-204ENST00000592208 STAG3Q9UJ98 1225 aa20.14■□□□□ 0.82
RAVER1-204ENST00000592208 CLIP1P30622 1438 aa20.14■□□□□ 0.81
RAVER1-204ENST00000592208 TSPY4P0CV99 314 aa20.14■□□□□ 0.81
RAVER1-204ENST00000592208 TSPY10P0CW01 314 aa20.14■□□□□ 0.81
RAVER1-204ENST00000592208 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.11■□□□□ 0.814e-8■■□□□ 13.6
RAVER1-204ENST00000592208 ACIN1Q9UKV3 1341 aaKnown RBP20.11■□□□□ 0.81
RAVER1-204ENST00000592208 KCNH8Q96L42 1107 aa20.09■□□□□ 0.81
RAVER1-204ENST00000592208 EEA1Q15075 1411 aa20.08■□□□□ 0.81
RAVER1-204ENST00000592208 KIF27Q86VH2 1401 aa20.07■□□□□ 0.8
RAVER1-204ENST00000592208 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
RAVER1-204ENST00000592208 CANXP27824 592 aaKnown RBP20.04■□□□□ 0.8
RAVER1-204ENST00000592208 PLEKHD1A6NEE1 506 aa20.03■□□□□ 0.8
RAVER1-204ENST00000592208 GOLGA3Q08378 1498 aa19.99■□□□□ 0.79
RAVER1-204ENST00000592208 PDS5BQ9NTI5 1447 aa19.97■□□□□ 0.79
RAVER1-204ENST00000592208 SLC24A1O60721 1099 aa19.95■□□□□ 0.78
RAVER1-204ENST00000592208 CEP162Q5TB80 1403 aa19.92■□□□□ 0.78
RAVER1-204ENST00000592208 MROH2BQ7Z745 1585 aa19.9■□□□□ 0.78
RAVER1-204ENST00000592208 GTF3C3Q9Y5Q9 886 aa19.9■□□□□ 0.78
RAVER1-204ENST00000592208 RRP7BPQ9NSQ0 103 aa19.9■□□□□ 0.78
RAVER1-204ENST00000592208 CEP164Q9UPV0 1460 aa19.85■□□□□ 0.77
RAVER1-204ENST00000592208 KDM2AQ9Y2K7 1162 aa19.85■□□□□ 0.77
RAVER1-204ENST00000592208 CFDP1Q9UEE9 299 aaPredicted RBP19.84■□□□□ 0.77
RAVER1-204ENST00000592208 CUX2O14529 1486 aa19.83■□□□□ 0.76
RAVER1-204ENST00000592208 TNIKQ9UKE5 1360 aa19.81■□□□□ 0.76
RAVER1-204ENST00000592208 CARMIL1Q5VZK9 1371 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms