RNA–Protein interactions for RNA: ENST00000319410.9

KARS-202, Transcript of lysyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KARS, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-202ENST00000319410 NISCHQ9Y2I1 1504 aa22.77■■□□□ 1.23
KARS-202ENST00000319410 CCDC180Q9P1Z9 1646 aa20.28■□□□□ 0.84
KARS-202ENST00000319410 ABCC9O60706 1549 aa20.25■□□□□ 0.83
KARS-202ENST00000319410 DCAF8L2P0C7V8 631 aa19.29■□□□□ 0.68
KARS-202ENST00000319410 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
KARS-202ENST00000319410 NACADO15069 1562 aa19.14■□□□□ 0.66
KARS-202ENST00000319410 PABPN1Q86U42 306 aaKnown RBP eCLIP18.93■□□□□ 0.62
KARS-202ENST00000319410 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
KARS-202ENST00000319410 MYO15BQ96JP2 1530 aa18.88■□□□□ 0.61
KARS-202ENST00000319410 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
KARS-202ENST00000319410 DNAJC5BQ9UF47 199 aa18.86■□□□□ 0.61
KARS-202ENST00000319410 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
KARS-202ENST00000319410 BICRAQ9NZM4 1560 aa18.73■□□□□ 0.59
KARS-202ENST00000319410 SCRIBQ14160 1630 aa18.63■□□□□ 0.57
KARS-202ENST00000319410 SHROOM4Q9ULL8 1493 aa18.36■□□□□ 0.53
KARS-202ENST00000319410 CC2D2AQ9P2K1 1620 aa18.26■□□□□ 0.51
KARS-202ENST00000319410 EIF4G1Q04637 1599 aaKnown RBP18.25■□□□□ 0.51
KARS-202ENST00000319410 CECR2Q9BXF3 1484 aa18.18■□□□□ 0.5
KARS-202ENST00000319410 SMARCA4P51532 1647 aa17.73■□□□□ 0.43
KARS-202ENST00000319410 ATAD2BQ9ULI0 1458 aa17.7■□□□□ 0.42
KARS-202ENST00000319410 NCAPD3P42695 1498 aa17.69■□□□□ 0.42
KARS-202ENST00000319410 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
KARS-202ENST00000319410 SMARCA2P51531 1590 aa17.62■□□□□ 0.41
KARS-202ENST00000319410 MROH2BQ7Z745 1585 aa17.6■□□□□ 0.41
KARS-202ENST00000319410 HMGXB3Q12766 1538 aa17.56■□□□□ 0.4
KARS-202ENST00000319410 BAZ1BQ9UIG0 1483 aaKnown RBP17.54■□□□□ 0.4
KARS-202ENST00000319410 PEG3Q9GZU2 1588 aa17.49■□□□□ 0.39
KARS-202ENST00000319410 NESP48681 1621 aa17.46■□□□□ 0.39
KARS-202ENST00000319410 ERCC6Q03468 1493 aa17.44■□□□□ 0.38
KARS-202ENST00000319410 WIZO95785 1651 aa17.41■□□□□ 0.38
KARS-202ENST00000319410 PELP1Q8IZL8 1130 aaKnown RBP17.3■□□□□ 0.36
KARS-202ENST00000319410 RSF1Q96T23 1441 aaPredicted RBP17.28■□□□□ 0.36
KARS-202ENST00000319410 CUX2O14529 1486 aa17.26■□□□□ 0.35
KARS-202ENST00000319410 LAMC3Q9Y6N6 1575 aa17.25■□□□□ 0.35
KARS-202ENST00000319410 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
KARS-202ENST00000319410 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
KARS-202ENST00000319410 THOC2Q8NI27 1593 aaKnown RBP17.17■□□□□ 0.34
KARS-202ENST00000319410 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
KARS-202ENST00000319410 TOP2AP11388 1531 aaKnown RBP17.13■□□□□ 0.33
KARS-202ENST00000319410 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
KARS-202ENST00000319410 MYT1Q01538 1121 aa17.09■□□□□ 0.33
KARS-202ENST00000319410 CFTRP13569 1480 aa17.02■□□□□ 0.32
KARS-202ENST00000319410 MRC2Q9UBG0 1479 aa17.02■□□□□ 0.32
KARS-202ENST00000319410 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.31
KARS-202ENST00000319410 CEP164Q9UPV0 1460 aa17■□□□□ 0.31
KARS-202ENST00000319410 CCDC88BA6NC98 1476 aa16.98■□□□□ 0.31
KARS-202ENST00000319410 WDR62O43379 1518 aa16.96■□□□□ 0.31
KARS-202ENST00000319410 URB2Q14146 1524 aaKnown RBP16.88■□□□□ 0.29
KARS-202ENST00000319410 PRDM2Q13029 1718 aa16.84■□□□□ 0.29
KARS-202ENST00000319410 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.27
KARS-202ENST00000319410 TOPBP1Q92547 1522 aa16.71■□□□□ 0.27
KARS-202ENST00000319410 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
KARS-202ENST00000319410 DNMBPQ6XZF7 1577 aa16.64■□□□□ 0.25
KARS-202ENST00000319410 IFT140Q96RY7 1462 aa16.63■□□□□ 0.25
KARS-202ENST00000319410 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
KARS-202ENST00000319410 OSCARQ8IYS5 282 aa16.56■□□□□ 0.24
KARS-202ENST00000319410 POLA1P09884 1462 aaPredicted RBP16.56■□□□□ 0.24
KARS-202ENST00000319410 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
KARS-202ENST00000319410 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.241e-6■■■■□ 19.3
KARS-202ENST00000319410 RAD54L2Q9Y4B4 1467 aa16.54■□□□□ 0.24
KARS-202ENST00000319410 TARBP1Q13395 1621 aaKnown RBP16.54■□□□□ 0.24
KARS-202ENST00000319410 TRIM41Q8WV44 630 aa16.53■□□□□ 0.24
KARS-202ENST00000319410 CUX1P39880 1505 aa16.51■□□□□ 0.23
KARS-202ENST00000319410 FGD5Q6ZNL6 1462 aa16.49■□□□□ 0.23
KARS-202ENST00000319410 SOGA1O94964 1423 aa16.49■□□□□ 0.23
KARS-202ENST00000319410 TDRD9Q8NDG6 1382 aaKnown RBP16.47■□□□□ 0.23
KARS-202ENST00000319410 FBLN2P98095 1184 aa16.44■□□□□ 0.22
KARS-202ENST00000319410 TTBK1Q5TCY1 1321 aaPredicted RBP16.42■□□□□ 0.22
KARS-202ENST00000319410 CHD1O14646 1710 aa16.4■□□□□ 0.22
KARS-202ENST00000319410 SNAPC4Q5SXM2 1469 aa16.36■□□□□ 0.21
KARS-202ENST00000319410 RIMBP3CA6NJZ7 1639 aa16.34■□□□□ 0.21
KARS-202ENST00000319410 RIMBP3BA6NNM3 1639 aa16.34■□□□□ 0.21
KARS-202ENST00000319410 RIMBP3Q9UFD9 1639 aa16.34■□□□□ 0.21
KARS-202ENST00000319410 WDR97A6NE52 1622 aa16.32■□□□□ 0.2
KARS-202ENST00000319410 ARHGEF11O15085 1522 aa16.3■□□□□ 0.2
KARS-202ENST00000319410 SYNJ1O43426 1573 aa16.3■□□□□ 0.2
KARS-202ENST00000319410 GRIN2BQ13224 1484 aa16.29■□□□□ 0.2
KARS-202ENST00000319410 WRNQ14191 1432 aaPredicted RBP eCLIP16.29■□□□□ 0.2
KARS-202ENST00000319410 GAPVD1Q14C86 1478 aa16.28■□□□□ 0.2
KARS-202ENST00000319410 CHMP7Q8WUX9 453 aaPredicted RBP16.28■□□□□ 0.2
KARS-202ENST00000319410 ABCA10Q8WWZ4 1543 aa16.27■□□□□ 0.19
KARS-202ENST00000319410 PBRM1Q86U86 1689 aa16.26■□□□□ 0.19
KARS-202ENST00000319410 TOP2BQ02880 1626 aa16.26■□□□□ 0.19
KARS-202ENST00000319410 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
KARS-202ENST00000319410 BIVM-ERCC5R4GMW8 1640 aa16.25■□□□□ 0.19
KARS-202ENST00000319410 ABCA5Q8WWZ7 1642 aa16.24■□□□□ 0.19
KARS-202ENST00000319410 CYB5RLQ6IPT4 315 aa16.23■□□□□ 0.19
KARS-202ENST00000319410 SYNJ2O15056 1496 aa16.22■□□□□ 0.19
KARS-202ENST00000319410 CLASP1Q7Z460 1538 aa16.18■□□□□ 0.18
KARS-202ENST00000319410 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
KARS-202ENST00000319410 ADAMTS12P58397 1594 aa16.11■□□□□ 0.17
KARS-202ENST00000319410 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
KARS-202ENST00000319410 FHAD1B1AJZ9 1412 aa16.06■□□□□ 0.16
KARS-202ENST00000319410 CEP170Q5SW79 1584 aa16.06■□□□□ 0.16
KARS-202ENST00000319410 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
KARS-202ENST00000319410 ERCC6L2Q5T890 1561 aa16.02■□□□□ 0.16
KARS-202ENST00000319410 NUP160Q12769 1436 aa16.02■□□□□ 0.15
KARS-202ENST00000319410 TRHP20396 242 aaPredicted RBP16■□□□□ 0.15
KARS-202ENST00000319410 HRCP23327 699 aa15.96■□□□□ 0.15
KARS-202ENST00000319410 KIF27Q86VH2 1401 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms