RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 MYT1Q01538 1121 aa18.52■□□□□ 0.56
EWSR1-216ENST00000479135 PELP1Q8IZL8 1130 aaKnown RBP18.34■□□□□ 0.53
EWSR1-216ENST00000479135 ERICH6Q7L0X2 663 aa18.23■□□□□ 0.51
EWSR1-216ENST00000479135 DCAF8L2P0C7V8 631 aa17.9■□□□□ 0.46
EWSR1-216ENST00000479135 EHMT2Q96KQ7 1210 aa17.85■□□□□ 0.45
EWSR1-216ENST00000479135 CCER1Q8TC90 406 aaPredicted RBP17.46■□□□□ 0.39
EWSR1-216ENST00000479135 TTBK1Q5TCY1 1321 aaPredicted RBP17.26■□□□□ 0.35
EWSR1-216ENST00000479135 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
EWSR1-216ENST00000479135 DAXXQ9UER7 740 aaPredicted RBP16.96■□□□□ 0.31
EWSR1-216ENST00000479135 CENPBP07199 599 aaPredicted RBP16.88■□□□□ 0.29
EWSR1-216ENST00000479135 SUPT5HO00267 1087 aaKnown RBP16.87■□□□□ 0.29
EWSR1-216ENST00000479135 NEFLP07196 543 aa16.84■□□□□ 0.29
EWSR1-216ENST00000479135 NISCHQ9Y2I1 1504 aa16.83■□□□□ 0.28
EWSR1-216ENST00000479135 RANGAP1P46060 587 aaPredicted RBP16.8■□□□□ 0.28
EWSR1-216ENST00000479135 PCGF6Q9BYE7 350 aa16.78■□□□□ 0.28
EWSR1-216ENST00000479135 APLP2Q06481 763 aa16.67■□□□□ 0.26
EWSR1-216ENST00000479135 CNGB1Q14028 1251 aaPredicted RBP16.64■□□□□ 0.25
EWSR1-216ENST00000479135 ZNF316A6NFI3 1004 aaPredicted RBP16.53■□□□□ 0.24
EWSR1-216ENST00000479135 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
EWSR1-216ENST00000479135 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
EWSR1-216ENST00000479135 POLR3GLQ9BT43 218 aa16.45■□□□□ 0.22
EWSR1-216ENST00000479135 ATP1B4Q9UN42 357 aaPredicted RBP16.45■□□□□ 0.22
EWSR1-216ENST00000479135 BCL11AQ9H165 835 aa16.4■□□□□ 0.22
EWSR1-216ENST00000479135 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
EWSR1-216ENST00000479135 CLSPNQ9HAW4 1339 aa16.35■□□□□ 0.21
EWSR1-216ENST00000479135 CHIC1Q5VXU3 224 aa16.28■□□□□ 0.2
EWSR1-216ENST00000479135 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
EWSR1-216ENST00000479135 SHROOM4Q9ULL8 1493 aa16.08■□□□□ 0.16
EWSR1-216ENST00000479135 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
EWSR1-216ENST00000479135 BCANQ96GW7 911 aa16.03■□□□□ 0.16
EWSR1-216ENST00000479135 PPARGC1BQ86YN6 1023 aaKnown RBP16■□□□□ 0.15
EWSR1-216ENST00000479135 MYT1LQ9UL68 1186 aa15.96■□□□□ 0.15
EWSR1-216ENST00000479135 SLC24A1O60721 1099 aa15.93■□□□□ 0.14
EWSR1-216ENST00000479135 ARXQ96QS3 562 aa15.91■□□□□ 0.14
EWSR1-216ENST00000479135 GLIPR1L2Q4G1C9 344 aa15.84■□□□□ 0.13
EWSR1-216ENST00000479135 ZEB1P37275 1124 aaPredicted RBP15.76■□□□□ 0.11
EWSR1-216ENST00000479135 NPM2Q86SE8 214 aaKnown RBP15.76■□□□□ 0.11
EWSR1-216ENST00000479135 ITGAEP38570 1179 aa15.74■□□□□ 0.11
EWSR1-216ENST00000479135 ZBTB47Q9UFB7 747 aaPredicted RBP15.68■□□□□ 0.1
EWSR1-216ENST00000479135 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
EWSR1-216ENST00000479135 TULP1O00294 542 aaPredicted RBP15.61■□□□□ 0.09
EWSR1-216ENST00000479135 ANP32BQ92688 251 aaKnown RBP15.58■□□□□ 0.08
EWSR1-216ENST00000479135 NBR1Q14596 966 aa15.55■□□□□ 0.08
EWSR1-216ENST00000479135 CDK11AQ9UQ88 783 aaPredicted RBP15.52■□□□□ 0.07
EWSR1-216ENST00000479135 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
EWSR1-216ENST00000479135 UBTFP17480 764 aaKnown RBP15.47■□□□□ 0.07
EWSR1-216ENST00000479135 CDK11BP21127 795 aaKnown RBP15.46■□□□□ 0.07
EWSR1-216ENST00000479135 HSP90AA1P07900 732 aaKnown RBP15.44■□□□□ 0.06
EWSR1-216ENST00000479135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.42■□□□□ 0.06
EWSR1-216ENST00000479135 HNRNPUL2Q1KMD3 747 aaKnown RBP15.42■□□□□ 0.06
EWSR1-216ENST00000479135 GTF3C3Q9Y5Q9 886 aa15.39■□□□□ 0.05
EWSR1-216ENST00000479135 TPRNQ4KMQ1 711 aa15.39■□□□□ 0.05
EWSR1-216ENST00000479135 HRCP23327 699 aa15.36■□□□□ 0.05
EWSR1-216ENST00000479135 ANP32AP39687 249 aaKnown RBP15.35■□□□□ 0.05
EWSR1-216ENST00000479135 RTN4Q9NQC3 1192 aaKnown RBP15.32■□□□□ 0.04
EWSR1-216ENST00000479135 TNNT2P45379 298 aaPredicted RBP15.28■□□□□ 0.04
EWSR1-216ENST00000479135 ARID4BQ4LE39 1312 aaPredicted RBP15.2■□□□□ 0.02
EWSR1-216ENST00000479135 TAOK2Q9UL54 1235 aa15.17■□□□□ 0.02
EWSR1-216ENST00000479135 DIEXFQ68CQ4 756 aaKnown RBP15.17■□□□□ 0.02
EWSR1-216ENST00000479135 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
EWSR1-216ENST00000479135 ARID3AQ99856 593 aa15.15■□□□□ 0.02
EWSR1-216ENST00000479135 DNTTIP2Q5QJE6 756 aaKnown RBP15.12■□□□□ 0.01
EWSR1-216ENST00000479135 TRIM41Q8WV44 630 aa15.12■□□□□ 0.01
EWSR1-216ENST00000479135 NAP1L5Q96NT1 182 aaPredicted RBP15.11■□□□□ 0.01
EWSR1-216ENST00000479135 ZBTB7CA1YPR0 619 aa15.1■□□□□ 0.01
EWSR1-216ENST00000479135 NEUROD1Q13562 356 aa15.1■□□□□ 0.01
EWSR1-216ENST00000479135 FBXO3Q9UK99 471 aa15.07■□□□□ 0
EWSR1-216ENST00000479135 A0A0G2JS52 829 aa15.03■□□□□ -0
EWSR1-216ENST00000479135 PRM3Q9NNZ6 103 aa15.03■□□□□ -0
EWSR1-216ENST00000479135 TRIM44Q96DX7 344 aaPredicted RBP15.02■□□□□ -0
EWSR1-216ENST00000479135 NCLP19338 710 aaKnown RBP15.01□□□□□ -0.01
EWSR1-216ENST00000479135 SALL2Q9Y467 1007 aaPredicted RBP14.99□□□□□ -0.01
EWSR1-216ENST00000479135 PTMAP06454 111 aaKnown RBP14.99□□□□□ -0.01
EWSR1-216ENST00000479135 PLPPR3Q6T4P5 718 aa14.97□□□□□ -0.01
EWSR1-216ENST00000479135 ANO8Q9HCE9 1232 aaPredicted RBP14.95□□□□□ -0.02
EWSR1-216ENST00000479135 PLCB2Q00722 1185 aa14.94□□□□□ -0.02
EWSR1-216ENST00000479135 TRIM52Q96A61 297 aa14.94□□□□□ -0.02
EWSR1-216ENST00000479135 UPF2Q9HAU5 1272 aaKnown RBP14.94□□□□□ -0.02
EWSR1-216ENST00000479135 NEFMP07197 916 aa14.94□□□□□ -0.02
EWSR1-216ENST00000479135 PDE4CQ08493 712 aa14.93□□□□□ -0.02
EWSR1-216ENST00000479135 CLSTN1O94985 981 aa14.93□□□□□ -0.02
EWSR1-216ENST00000479135 PLEKHG5O94827 1062 aa14.92□□□□□ -0.02
EWSR1-216ENST00000479135 ANP32CO43423 234 aa14.9□□□□□ -0.02
EWSR1-216ENST00000479135 FKBP8Q14318 412 aa14.9□□□□□ -0.02
EWSR1-216ENST00000479135 CALRP27797 417 aaKnown RBP14.89□□□□□ -0.03
EWSR1-216ENST00000479135 ERICH6BQ5W0A0 696 aa14.88□□□□□ -0.03
EWSR1-216ENST00000479135 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.88□□□□□ -0.03
EWSR1-216ENST00000479135 TRIM26Q12899 539 aaPredicted RBP14.87□□□□□ -0.03
EWSR1-216ENST00000479135 TNNT3P45378 269 aaPredicted RBP14.82□□□□□ -0.04
EWSR1-216ENST00000479135 FAM50AQ14320 339 aaKnown RBP14.81□□□□□ -0.04
EWSR1-216ENST00000479135 SCAF1Q9H7N4 1312 aaKnown RBP14.8□□□□□ -0.04
EWSR1-216ENST00000479135 PATL2C9JE40 543 aaKnown RBP14.79□□□□□ -0.04
EWSR1-216ENST00000479135 IRX6P78412 446 aaPredicted RBP14.78□□□□□ -0.04
EWSR1-216ENST00000479135 ZRSR1Q15695 479 aaKnown RBP14.77□□□□□ -0.05
EWSR1-216ENST00000479135 CCDC136Q96JN2 1154 aa14.76□□□□□ -0.05
EWSR1-216ENST00000479135 TAF7LQ5H9L4 462 aa14.72□□□□□ -0.05
EWSR1-216ENST00000479135 APPP05067 770 aa14.68□□□□□ -0.06
EWSR1-216ENST00000479135 NOC3LQ8WTT2 800 aaKnown RBP14.66□□□□□ -0.06
EWSR1-216ENST00000479135 SENP3Q9H4L4 574 aaPredicted RBP14.66□□□□□ -0.06
EWSR1-216ENST00000479135 SENP3-EIF4A1A0A087X0R7 540 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms