RNA–Protein interactions for RNA: ENST00000332035.10

EWSR1-202, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EWSR1, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-202ENST00000332035 NISCHQ9Y2I1 1504 aa39.7■■■■□ 3.95
EWSR1-202ENST00000332035 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
EWSR1-202ENST00000332035 ZCCHC6Q5VYS8 1495 aaKnown RBP33.36■■■□□ 2.93
EWSR1-202ENST00000332035 DCAF8L2P0C7V8 631 aa32.95■■■□□ 2.87
EWSR1-202ENST00000332035 ABCC9O60706 1549 aa32.72■■■□□ 2.83
EWSR1-202ENST00000332035 DCAF1Q9Y4B6 1507 aa32.7■■■□□ 2.83
EWSR1-202ENST00000332035 SHROOM4Q9ULL8 1493 aa32.68■■■□□ 2.82
EWSR1-202ENST00000332035 MYO15BQ96JP2 1530 aa32.25■■■□□ 2.75
EWSR1-202ENST00000332035 NACADO15069 1562 aa32.09■■■□□ 2.73
EWSR1-202ENST00000332035 SCRIBQ14160 1630 aa31.89■■■□□ 2.69
EWSR1-202ENST00000332035 RB1CC1Q8TDY2 1594 aa31.81■■■□□ 2.68
EWSR1-202ENST00000332035 SUPT5HO00267 1087 aaKnown RBP31.48■■■□□ 2.63
EWSR1-202ENST00000332035 UNC13AQ9UPW8 1703 aa31.26■■■□□ 2.59
EWSR1-202ENST00000332035 CECR2Q9BXF3 1484 aa30.97■■■□□ 2.55
EWSR1-202ENST00000332035 PABPN1Q86U42 306 aaKnown RBP eCLIP30.96■■■□□ 2.558e-9■□□□□ 10.7
EWSR1-202ENST00000332035 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
EWSR1-202ENST00000332035 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
EWSR1-202ENST00000332035 MROH2BQ7Z745 1585 aa30.76■■■□□ 2.51
EWSR1-202ENST00000332035 BAZ1AQ9NRL2 1556 aaPredicted RBP30.6■■■□□ 2.49
EWSR1-202ENST00000332035 WIZO95785 1651 aa30.51■■■□□ 2.47
EWSR1-202ENST00000332035 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
EWSR1-202ENST00000332035 CHIC1Q5VXU3 224 aa30.16■■■□□ 2.42
EWSR1-202ENST00000332035 TOP2AP11388 1531 aaKnown RBP30.1■■■□□ 2.41
EWSR1-202ENST00000332035 PEG3Q9GZU2 1588 aa30.05■■■□□ 2.4
EWSR1-202ENST00000332035 ATAD2BQ9ULI0 1458 aa30■■■□□ 2.39
EWSR1-202ENST00000332035 EIF4G1Q04637 1599 aaKnown RBP29.99■■■□□ 2.39
EWSR1-202ENST00000332035 SMARCA2P51531 1590 aa29.89■■■□□ 2.38
EWSR1-202ENST00000332035 CCDC88BA6NC98 1476 aa29.87■■■□□ 2.37
EWSR1-202ENST00000332035 BAZ1BQ9UIG0 1483 aaKnown RBP29.82■■■□□ 2.36
EWSR1-202ENST00000332035 NCAPD3P42695 1498 aa29.67■■■□□ 2.34
EWSR1-202ENST00000332035 HMGXB3Q12766 1538 aa29.59■■■□□ 2.33
EWSR1-202ENST00000332035 CC2D2AQ9P2K1 1620 aa29.54■■■□□ 2.32
EWSR1-202ENST00000332035 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
EWSR1-202ENST00000332035 ABCC8Q09428 1581 aa29.33■■■□□ 2.29
EWSR1-202ENST00000332035 LOC105371045A0A1W2PR82 267 aa29.1■■■□□ 2.25
EWSR1-202ENST00000332035 FAM9AQ8IZU1 332 aaPredicted RBP29.08■■■□□ 2.25
EWSR1-202ENST00000332035 CFTRP13569 1480 aa29.06■■■□□ 2.24
EWSR1-202ENST00000332035 WRNQ14191 1432 aaPredicted RBP eCLIP29.04■■■□□ 2.24
EWSR1-202ENST00000332035 DNAJC5BQ9UF47 199 aa29.02■■■□□ 2.24
EWSR1-202ENST00000332035 SYNJ1O43426 1573 aa28.96■■■□□ 2.23
EWSR1-202ENST00000332035 CADPSQ9ULU8 1353 aa28.96■■■□□ 2.23
EWSR1-202ENST00000332035 SOGA1O94964 1423 aa28.82■■■□□ 2.2
EWSR1-202ENST00000332035 PRDM2Q13029 1718 aa28.82■■■□□ 2.2
EWSR1-202ENST00000332035 NESP48681 1621 aa28.79■■■□□ 2.2
EWSR1-202ENST00000332035 EHMT2Q96KQ7 1210 aa28.77■■■□□ 2.2
EWSR1-202ENST00000332035 TOP2BQ02880 1626 aa28.76■■■□□ 2.19
EWSR1-202ENST00000332035 RUSC2Q8N2Y8 1516 aa28.74■■■□□ 2.19
EWSR1-202ENST00000332035 CUX1P39880 1505 aa28.73■■■□□ 2.19
EWSR1-202ENST00000332035 BIVM-ERCC5R4GMW8 1640 aa28.7■■■□□ 2.18
EWSR1-202ENST00000332035 FANCD2Q9BXW9 1451 aa28.65■■■□□ 2.18
EWSR1-202ENST00000332035 LAMC3Q9Y6N6 1575 aa28.6■■■□□ 2.17
EWSR1-202ENST00000332035 EEA1Q15075 1411 aa28.59■■■□□ 2.17
EWSR1-202ENST00000332035 CSRNP3Q8WYN3 585 aa28.54■■■□□ 2.16
EWSR1-202ENST00000332035 CEP164Q9UPV0 1460 aa28.43■■■□□ 2.14
EWSR1-202ENST00000332035 PDS5BQ9NTI5 1447 aa28.41■■■□□ 2.14
EWSR1-202ENST00000332035 FGD5Q6ZNL6 1462 aa28.39■■■□□ 2.14
EWSR1-202ENST00000332035 DNMBPQ6XZF7 1577 aa28.36■■■□□ 2.13
EWSR1-202ENST00000332035 TOPBP1Q92547 1522 aa28.35■■■□□ 2.13
EWSR1-202ENST00000332035 KIF21AQ7Z4S6 1674 aa28.35■■■□□ 2.13
EWSR1-202ENST00000332035 URB2Q14146 1524 aaKnown RBP28.33■■■□□ 2.12
EWSR1-202ENST00000332035 GOLGA3Q08378 1498 aa28.28■■■□□ 2.12
EWSR1-202ENST00000332035 KIF27Q86VH2 1401 aa28.26■■■□□ 2.11
EWSR1-202ENST00000332035 UBTFP17480 764 aaKnown RBP28.25■■■□□ 2.11
EWSR1-202ENST00000332035 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
EWSR1-202ENST00000332035 KIF21BO75037 1637 aa28.24■■■□□ 2.11
EWSR1-202ENST00000332035 CUX2O14529 1486 aa28.23■■■□□ 2.11
EWSR1-202ENST00000332035 RAD54L2Q9Y4B4 1467 aa28.22■■■□□ 2.11
EWSR1-202ENST00000332035 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
EWSR1-202ENST00000332035 RAPGEF2Q9Y4G8 1499 aa28.19■■■□□ 2.1
EWSR1-202ENST00000332035 CEP162Q5TB80 1403 aa28.14■■■□□ 2.1
EWSR1-202ENST00000332035 PRXQ9BXM0 1461 aa28.13■■■□□ 2.09
EWSR1-202ENST00000332035 PCGF6Q9BYE7 350 aa28.09■■■□□ 2.09
EWSR1-202ENST00000332035 ABCA10Q8WWZ4 1543 aa28.09■■■□□ 2.09
EWSR1-202ENST00000332035 IGF1RP08069 1367 aa28.08■■■□□ 2.08
EWSR1-202ENST00000332035 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
EWSR1-202ENST00000332035 ERICH3Q5RHP9 1530 aa28.01■■■□□ 2.07
EWSR1-202ENST00000332035 WDR97A6NE52 1622 aa27.97■■■□□ 2.07
EWSR1-202ENST00000332035 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
EWSR1-202ENST00000332035 TDRD9Q8NDG6 1382 aaKnown RBP27.94■■■□□ 2.06
EWSR1-202ENST00000332035 TRIM26Q12899 539 aaPredicted RBP27.92■■■□□ 2.06
EWSR1-202ENST00000332035 CARMIL1Q5VZK9 1371 aa27.92■■■□□ 2.06
EWSR1-202ENST00000332035 TARBP1Q13395 1621 aaKnown RBP27.9■■■□□ 2.06
EWSR1-202ENST00000332035 WDR62O43379 1518 aa27.9■■■□□ 2.06
EWSR1-202ENST00000332035 RANGAP1P46060 587 aaPredicted RBP27.88■■■□□ 2.05
EWSR1-202ENST00000332035 CLIP1P30622 1438 aa27.86■■■□□ 2.05
EWSR1-202ENST00000332035 ABCA5Q8WWZ7 1642 aa27.85■■■□□ 2.05
EWSR1-202ENST00000332035 THOC2Q8NI27 1593 aaKnown RBP27.82■■■□□ 2.04
EWSR1-202ENST00000332035 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
EWSR1-202ENST00000332035 PPARGC1BQ86YN6 1023 aaKnown RBP27.82■■■□□ 2.04
EWSR1-202ENST00000332035 AQRO60306 1485 aaKnown RBP eCLIP27.74■■■□□ 2.032e-7■■■□□ 18.8
EWSR1-202ENST00000332035 IFT140Q96RY7 1462 aa27.72■■■□□ 2.03
EWSR1-202ENST00000332035 CUL7Q14999 1698 aa27.72■■■□□ 2.03
EWSR1-202ENST00000332035 ZNF608Q9ULD9 1512 aaPredicted RBP27.7■■■□□ 2.03
EWSR1-202ENST00000332035 VPS8Q8N3P4 1428 aa27.63■■■□□ 2.01
EWSR1-202ENST00000332035 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
EWSR1-202ENST00000332035 ARAP1Q96P48 1450 aa27.6■■■□□ 2.01
EWSR1-202ENST00000332035 TTBK1Q5TCY1 1321 aaPredicted RBP27.59■■■□□ 2.01
EWSR1-202ENST00000332035 ARHGAP35Q9NRY4 1499 aa27.57■■■□□ 2
EWSR1-202ENST00000332035 GRIN2BQ13224 1484 aa27.56■■■□□ 2
EWSR1-202ENST00000332035 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms