RNA–Protein interactions for RNA: ENST00000542255.6

ACADVL-204, Transcript of acyl-CoA dehydrogenase very long chain, humanhuman

TSL 5

Gene ACADVL, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACADVL-204ENST00000542255 NISCHQ9Y2I1 1504 aa41.22■■■■■ 4.19
ACADVL-204ENST00000542255 CCDC180Q9P1Z9 1646 aa36.63■■■■□ 3.45
ACADVL-204ENST00000542255 ABCC9O60706 1549 aa36.03■■■■□ 3.36
ACADVL-204ENST00000542255 RB1CC1Q8TDY2 1594 aa34.53■■■■□ 3.12
ACADVL-204ENST00000542255 DCAF8L2P0C7V8 631 aa34.47■■■■□ 3.11
ACADVL-204ENST00000542255 NACADO15069 1562 aa34.47■■■■□ 3.11
ACADVL-204ENST00000542255 ZCCHC6Q5VYS8 1495 aaKnown RBP34.31■■■■□ 3.08
ACADVL-204ENST00000542255 MYO15BQ96JP2 1530 aa34.23■■■■□ 3.07
ACADVL-204ENST00000542255 DCAF1Q9Y4B6 1507 aa34.06■■■■□ 3.04
ACADVL-204ENST00000542255 UNC13AQ9UPW8 1703 aa33.84■■■■□ 3.01
ACADVL-204ENST00000542255 PABPN1Q86U42 306 aaKnown RBP eCLIP33.68■■■□□ 2.985e-9■■■■■ 34.2
ACADVL-204ENST00000542255 BICRAQ9NZM4 1560 aa33.6■■■□□ 2.97
ACADVL-204ENST00000542255 SCRIBQ14160 1630 aa33.46■■■□□ 2.95
ACADVL-204ENST00000542255 DNAJC5BQ9UF47 199 aa33.29■■■□□ 2.92
ACADVL-204ENST00000542255 SHROOM4Q9ULL8 1493 aa33.08■■■□□ 2.89
ACADVL-204ENST00000542255 EIF4G1Q04637 1599 aaKnown RBP32.66■■■□□ 2.82
ACADVL-204ENST00000542255 CC2D2AQ9P2K1 1620 aa32.57■■■□□ 2.8
ACADVL-204ENST00000542255 CECR2Q9BXF3 1484 aa32.35■■■□□ 2.77
ACADVL-204ENST00000542255 SMARCA4P51532 1647 aa32■■■□□ 2.71
ACADVL-204ENST00000542255 BAZ1AQ9NRL2 1556 aaPredicted RBP31.9■■■□□ 2.7
ACADVL-204ENST00000542255 ATAD2BQ9ULI0 1458 aa31.87■■■□□ 2.69
ACADVL-204ENST00000542255 NCAPD3P42695 1498 aa31.85■■■□□ 2.69
ACADVL-204ENST00000542255 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
ACADVL-204ENST00000542255 SMARCA2P51531 1590 aa31.76■■■□□ 2.67
ACADVL-204ENST00000542255 PEG3Q9GZU2 1588 aa31.68■■■□□ 2.66
ACADVL-204ENST00000542255 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
ACADVL-204ENST00000542255 BAZ1BQ9UIG0 1483 aaKnown RBP31.54■■■□□ 2.64
ACADVL-204ENST00000542255 WIZO95785 1651 aa31.44■■■□□ 2.62
ACADVL-204ENST00000542255 RSF1Q96T23 1441 aaPredicted RBP31.39■■■□□ 2.62
ACADVL-204ENST00000542255 NESP48681 1621 aa31.19■■■□□ 2.58
ACADVL-204ENST00000542255 TOP2AP11388 1531 aaKnown RBP31.05■■■□□ 2.56
ACADVL-204ENST00000542255 LAMC3Q9Y6N6 1575 aa30.98■■■□□ 2.55
ACADVL-204ENST00000542255 ERCC6Q03468 1493 aa30.97■■■□□ 2.55
ACADVL-204ENST00000542255 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
ACADVL-204ENST00000542255 KIF21AQ7Z4S6 1674 aa30.78■■■□□ 2.52
ACADVL-204ENST00000542255 PDS5BQ9NTI5 1447 aa30.77■■■□□ 2.52
ACADVL-204ENST00000542255 CCDC88BA6NC98 1476 aa30.74■■■□□ 2.51
ACADVL-204ENST00000542255 CFTRP13569 1480 aa30.71■■■□□ 2.51
ACADVL-204ENST00000542255 CUX2O14529 1486 aa30.7■■■□□ 2.51
ACADVL-204ENST00000542255 THOC2Q8NI27 1593 aaKnown RBP30.69■■■□□ 2.5
ACADVL-204ENST00000542255 FANCD2Q9BXW9 1451 aa30.56■■■□□ 2.48
ACADVL-204ENST00000542255 CEP164Q9UPV0 1460 aa30.5■■■□□ 2.47
ACADVL-204ENST00000542255 SUPT5HO00267 1087 aaKnown RBP30.49■■■□□ 2.47
ACADVL-204ENST00000542255 MRC2Q9UBG0 1479 aa30.49■■■□□ 2.47
ACADVL-204ENST00000542255 PRDM2Q13029 1718 aa30.43■■■□□ 2.46
ACADVL-204ENST00000542255 WDR62O43379 1518 aa30.4■■■□□ 2.46
ACADVL-204ENST00000542255 URB2Q14146 1524 aaKnown RBP30.3■■■□□ 2.44
ACADVL-204ENST00000542255 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
ACADVL-204ENST00000542255 DNMBPQ6XZF7 1577 aa29.99■■■□□ 2.39
ACADVL-204ENST00000542255 ABCC8Q09428 1581 aa29.98■■■□□ 2.39
ACADVL-204ENST00000542255 DNAJC5Q9H3Z4 198 aa29.97■■■□□ 2.39
ACADVL-204ENST00000542255 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
ACADVL-204ENST00000542255 CUX1P39880 1505 aa29.83■■■□□ 2.37
ACADVL-204ENST00000542255 ZNF608Q9ULD9 1512 aaPredicted RBP29.82■■■□□ 2.36
ACADVL-204ENST00000542255 POLA1P09884 1462 aaPredicted RBP29.81■■■□□ 2.36
ACADVL-204ENST00000542255 TARBP1Q13395 1621 aaKnown RBP29.77■■■□□ 2.36
ACADVL-204ENST00000542255 RAD54L2Q9Y4B4 1467 aa29.72■■■□□ 2.35
ACADVL-204ENST00000542255 FGD5Q6ZNL6 1462 aa29.71■■■□□ 2.35
ACADVL-204ENST00000542255 SOGA1O94964 1423 aa29.67■■■□□ 2.34
ACADVL-204ENST00000542255 EIF4G3O43432 1585 aaKnown RBP29.64■■■□□ 2.33
ACADVL-204ENST00000542255 AQRO60306 1485 aaKnown RBP eCLIP29.63■■■□□ 2.332e-8■■■■□ 19.7
ACADVL-204ENST00000542255 TDRD9Q8NDG6 1382 aaKnown RBP29.55■■■□□ 2.32
ACADVL-204ENST00000542255 WRNQ14191 1432 aaPredicted RBP eCLIP29.54■■■□□ 2.32
ACADVL-204ENST00000542255 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
ACADVL-204ENST00000542255 TOP2BQ02880 1626 aa29.5■■■□□ 2.31
ACADVL-204ENST00000542255 BIVM-ERCC5R4GMW8 1640 aa29.5■■■□□ 2.31
ACADVL-204ENST00000542255 WDR97A6NE52 1622 aa29.48■■■□□ 2.31
ACADVL-204ENST00000542255 OSCARQ8IYS5 282 aa29.44■■■□□ 2.3
ACADVL-204ENST00000542255 ABCA10Q8WWZ4 1543 aa29.41■■■□□ 2.3
ACADVL-204ENST00000542255 GRIN2BQ13224 1484 aa29.31■■■□□ 2.28
ACADVL-204ENST00000542255 GAPVD1Q14C86 1478 aa29.31■■■□□ 2.28
ACADVL-204ENST00000542255 SNAPC4Q5SXM2 1469 aa29.31■■■□□ 2.28
ACADVL-204ENST00000542255 CHD1O14646 1710 aa29.31■■■□□ 2.28
ACADVL-204ENST00000542255 ABCA5Q8WWZ7 1642 aa29.31■■■□□ 2.28
ACADVL-204ENST00000542255 PBRM1Q86U86 1689 aa29.26■■■□□ 2.27
ACADVL-204ENST00000542255 FBLN2P98095 1184 aa29.24■■■□□ 2.27
ACADVL-204ENST00000542255 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
ACADVL-204ENST00000542255 SYNJ2O15056 1496 aa29.13■■■□□ 2.25
ACADVL-204ENST00000542255 CHMP7Q8WUX9 453 aaPredicted RBP29.13■■■□□ 2.25
ACADVL-204ENST00000542255 ERICH3Q5RHP9 1530 aa29.03■■■□□ 2.24
ACADVL-204ENST00000542255 ADAMTS12P58397 1594 aa29.02■■■□□ 2.24
ACADVL-204ENST00000542255 RIMBP3CA6NJZ7 1639 aa29.01■■■□□ 2.23
ACADVL-204ENST00000542255 RIMBP3BA6NNM3 1639 aa29.01■■■□□ 2.23
ACADVL-204ENST00000542255 RIMBP3Q9UFD9 1639 aa29.01■■■□□ 2.23
ACADVL-204ENST00000542255 CLASP1Q7Z460 1538 aa28.99■■■□□ 2.23
ACADVL-204ENST00000542255 ARHGEF11O15085 1522 aa28.99■■■□□ 2.23
ACADVL-204ENST00000542255 FHAD1B1AJZ9 1412 aa28.96■■■□□ 2.23
ACADVL-204ENST00000542255 GRIN2AQ12879 1464 aa28.95■■■□□ 2.22
ACADVL-204ENST00000542255 TRIM41Q8WV44 630 aa28.91■■■□□ 2.22
ACADVL-204ENST00000542255 KIF27Q86VH2 1401 aa28.91■■■□□ 2.22
ACADVL-204ENST00000542255 IGF1RP08069 1367 aa28.88■■■□□ 2.21
ACADVL-204ENST00000542255 CEP170Q5SW79 1584 aa28.85■■■□□ 2.21
ACADVL-204ENST00000542255 NUP160Q12769 1436 aa28.85■■■□□ 2.21
ACADVL-204ENST00000542255 ARAP1Q96P48 1450 aa28.77■■■□□ 2.2
ACADVL-204ENST00000542255 RUSC2Q8N2Y8 1516 aa28.75■■■□□ 2.19
ACADVL-204ENST00000542255 CYB5RLQ6IPT4 315 aa28.73■■■□□ 2.19
ACADVL-204ENST00000542255 CUL7Q14999 1698 aa28.72■■■□□ 2.19
ACADVL-204ENST00000542255 CARMIL1Q5VZK9 1371 aa28.68■■■□□ 2.18
ACADVL-204ENST00000542255 ERCC6L2Q5T890 1561 aa28.65■■■□□ 2.18
ACADVL-204ENST00000542255 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms